RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, human

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB3IP-216	ENST00000552199	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	10.81	□□□□□ -0.68	7e-17	■■■■■ 33.5
RAB3IP-216	ENST00000552199	FBLL1	A6NHQ2	334 aa	Known RBP	10.81	□□□□□ -0.68
RAB3IP-216	ENST00000552199	FOXA3	P55318	350 aa	Predicted RBP	10.81	□□□□□ -0.68
RAB3IP-216	ENST00000552199	BLCAP	P62952	87 aa		10.81	□□□□□ -0.68
RAB3IP-216	ENST00000552199	IGFL4	Q6B9Z1	124 aa		10.81	□□□□□ -0.68
RAB3IP-216	ENST00000552199		U3KQE9	123 aa		10.81	□□□□□ -0.68
RAB3IP-216	ENST00000552199	CELSR2	Q9HCU4	2923 aa		10.81	□□□□□ -0.68
RAB3IP-216	ENST00000552199		J3QLI3	93 aa		10.8	□□□□□ -0.68
RAB3IP-216	ENST00000552199	APOH	P02749	345 aa	Predicted RBP	10.8	□□□□□ -0.68
RAB3IP-216	ENST00000552199	HLA-DMB	P28068	263 aa		10.8	□□□□□ -0.68
RAB3IP-216	ENST00000552199	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		10.8	□□□□□ -0.68
RAB3IP-216	ENST00000552199	COX8C	Q7Z4L0	72 aa		10.8	□□□□□ -0.68
RAB3IP-216	ENST00000552199	SSBP4	Q9BWG4	385 aa	Predicted RBP	10.8	□□□□□ -0.68
RAB3IP-216	ENST00000552199	CELSR1	Q9NYQ6	3014 aa		10.8	□□□□□ -0.68
RAB3IP-216	ENST00000552199	IGHV3-66	A0A0C4DH42	116 aa		10.8	□□□□□ -0.68
RAB3IP-216	ENST00000552199		A8MWP6	167 aa		10.8	□□□□□ -0.68
RAB3IP-216	ENST00000552199	ZNF207	O43670	478 aa	Known RBP	10.8	□□□□□ -0.68
RAB3IP-216	ENST00000552199	CT45A10	P0DMU9	189 aa		10.8	□□□□□ -0.68
RAB3IP-216	ENST00000552199	ARL3	P36405	182 aa		10.8	□□□□□ -0.68
RAB3IP-216	ENST00000552199	SAPCD1	Q5SSQ6	148 aa		10.8	□□□□□ -0.68
RAB3IP-216	ENST00000552199	LCN12	Q6JVE5	192 aa		10.8	□□□□□ -0.68
RAB3IP-216	ENST00000552199		Q6ZS46	218 aa		10.8	□□□□□ -0.68
RAB3IP-216	ENST00000552199	USMG5	Q96IX5	58 aa		10.8	□□□□□ -0.68
RAB3IP-216	ENST00000552199	ZFHX3	Q15911	3703 aa		10.79	□□□□□ -0.68
RAB3IP-216	ENST00000552199	ZNF705F	A8MVS1	300 aa	Predicted RBP	10.79	□□□□□ -0.68
RAB3IP-216	ENST00000552199	LOXL1	Q08397	574 aa	Predicted RBP	10.79	□□□□□ -0.68
RAB3IP-216	ENST00000552199	PRR25	Q96S07	402 aa		10.79	□□□□□ -0.68
RAB3IP-216	ENST00000552199	VGLL1	Q99990	258 aa		10.79	□□□□□ -0.68
RAB3IP-216	ENST00000552199	ANKRD17	O75179	2603 aa	Known RBP	10.78	□□□□□ -0.68
RAB3IP-216	ENST00000552199	IGHV3OR16-13	A0A075B7E8	117 aa		10.78	□□□□□ -0.68
RAB3IP-216	ENST00000552199	IGHV3-74	A0A0B4J1X5	117 aa		10.78	□□□□□ -0.68
RAB3IP-216	ENST00000552199	HAX1	O00165	279 aa		10.78	□□□□□ -0.68
RAB3IP-216	ENST00000552199	TGFA	P01135	160 aa		10.78	□□□□□ -0.68
RAB3IP-216	ENST00000552199	KRTAP10-9	P60411	292 aa		10.78	□□□□□ -0.68
RAB3IP-216	ENST00000552199	DEFB112	Q30KQ8	113 aa		10.78	□□□□□ -0.68
RAB3IP-216	ENST00000552199	C18orf32	Q8TCD1	76 aa		10.78	□□□□□ -0.68
RAB3IP-216	ENST00000552199	RCHY1	Q96PM5	261 aa		10.78	□□□□□ -0.68
RAB3IP-216	ENST00000552199	SLC50A1	Q9BRV3	221 aa		10.78	□□□□□ -0.68
RAB3IP-216	ENST00000552199	ALKBH7	Q9BT30	221 aa	Predicted RBP	10.78	□□□□□ -0.68
RAB3IP-216	ENST00000552199	MAP1A	P78559	2803 aa	Predicted RBP	10.78	□□□□□ -0.68
RAB3IP-216	ENST00000552199	IGHV3-49	A0A0A0MS15	119 aa		10.78	□□□□□ -0.68
RAB3IP-216	ENST00000552199	GPX1	P07203	203 aa		10.78	□□□□□ -0.68
RAB3IP-216	ENST00000552199	KLF5	Q13887	457 aa	Predicted RBP	10.78	□□□□□ -0.68
RAB3IP-216	ENST00000552199	MAPK1IP1L	Q8NDC0	245 aa		10.78	□□□□□ -0.68
RAB3IP-216	ENST00000552199	SAMD10	Q9BYL1	202 aa		10.78	□□□□□ -0.68
RAB3IP-216	ENST00000552199	FBN2	P35556	2912 aa		10.77	□□□□□ -0.68
RAB3IP-216	ENST00000552199	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	10.77	□□□□□ -0.69
RAB3IP-216	ENST00000552199		A0A1W2PS18	150 aa		10.77	□□□□□ -0.69
RAB3IP-216	ENST00000552199	RNF223	E7ERA6	249 aa		10.77	□□□□□ -0.69
RAB3IP-216	ENST00000552199	SH2D1A	O60880	128 aa		10.77	□□□□□ -0.69
RAB3IP-216	ENST00000552199	IGLV1-40	P01703	118 aa		10.77	□□□□□ -0.69
RAB3IP-216	ENST00000552199	TRBV12-3	P01733	135 aa		10.77	□□□□□ -0.69
RAB3IP-216	ENST00000552199	PF4V1	P10720	104 aa		10.77	□□□□□ -0.69
RAB3IP-216	ENST00000552199	IQCJ	Q1A5X6	159 aa		10.77	□□□□□ -0.69
RAB3IP-216	ENST00000552199		Q6ZWC4	215 aa		10.77	□□□□□ -0.69
RAB3IP-216	ENST00000552199	KCNS1	Q96KK3	526 aa		10.77	□□□□□ -0.69
RAB3IP-216	ENST00000552199	KLK15	Q9H2R5	256 aa		10.77	□□□□□ -0.69
RAB3IP-216	ENST00000552199	BEX4	Q9NWD9	120 aa	Predicted RBP	10.77	□□□□□ -0.69
RAB3IP-216	ENST00000552199	NDUFA4	O00483	81 aa		10.76	□□□□□ -0.69
RAB3IP-216	ENST00000552199	SCGB1D1	O95968	90 aa		10.76	□□□□□ -0.69
RAB3IP-216	ENST00000552199	PKIA	P61925	76 aa		10.76	□□□□□ -0.69
RAB3IP-216	ENST00000552199	FAM162B	Q5T6X4	162 aa		10.76	□□□□□ -0.69
RAB3IP-216	ENST00000552199	SIGLECL1	Q8N7X8	197 aa		10.76	□□□□□ -0.69
RAB3IP-216	ENST00000552199	LRRK2	Q5S007	2527 aa		10.76	□□□□□ -0.69
RAB3IP-216	ENST00000552199		A0A1B0GUT8	65 aa		10.76	□□□□□ -0.69
RAB3IP-216	ENST00000552199	RBAKDN	A6NC62	111 aa		10.76	□□□□□ -0.69
RAB3IP-216	ENST00000552199	PRAC2	D3DTV9	90 aa		10.76	□□□□□ -0.69
RAB3IP-216	ENST00000552199	IGHV4-59	P01825	116 aa		10.76	□□□□□ -0.69
RAB3IP-216	ENST00000552199	CFHR3	Q02985	330 aa		10.76	□□□□□ -0.69
RAB3IP-216	ENST00000552199	DEFB113	Q30KQ7	82 aa		10.76	□□□□□ -0.69
RAB3IP-216	ENST00000552199		Q6AWC8	147 aa		10.76	□□□□□ -0.69
RAB3IP-216	ENST00000552199	RNF182	Q8N6D2	247 aa		10.76	□□□□□ -0.69
RAB3IP-216	ENST00000552199		Q8TAT8	98 aa		10.76	□□□□□ -0.69
RAB3IP-216	ENST00000552199	ZNF580	Q9UK33	172 aa		10.76	□□□□□ -0.69
RAB3IP-216	ENST00000552199	TRAV8-2	A0A0B4J237	113 aa		10.75	□□□□□ -0.69
RAB3IP-216	ENST00000552199	TMEM189	A5PLL7	270 aa		10.75	□□□□□ -0.69
RAB3IP-216	ENST00000552199	IGHV3-11	P01762	117 aa		10.75	□□□□□ -0.69
RAB3IP-216	ENST00000552199	IGHV4-31	P0DP07	118 aa		10.75	□□□□□ -0.69
RAB3IP-216	ENST00000552199	RIG	Q13278	110 aa		10.75	□□□□□ -0.69
RAB3IP-216	ENST00000552199	GLMP	Q8WWB7	406 aa		10.75	□□□□□ -0.69
RAB3IP-216	ENST00000552199	NAGK	Q9UJ70	344 aa		10.75	□□□□□ -0.69
RAB3IP-216	ENST00000552199		A0A0G2JLM5	398 aa		10.74	□□□□□ -0.69
RAB3IP-216	ENST00000552199	ZNF324	O75467	553 aa	Predicted RBP	10.74	□□□□□ -0.69
RAB3IP-216	ENST00000552199	ARMS2	P0C7Q2	107 aa		10.74	□□□□□ -0.69
RAB3IP-216	ENST00000552199	ERCC8	Q13216	396 aa		10.74	□□□□□ -0.69
RAB3IP-216	ENST00000552199	PRR31	Q5SQ13	230 aa		10.74	□□□□□ -0.69
RAB3IP-216	ENST00000552199	UNQ9165/PRO28630	Q6UXU0	137 aa		10.74	□□□□□ -0.69
RAB3IP-216	ENST00000552199	C8orf86	Q6ZUL3	223 aa		10.74	□□□□□ -0.69
RAB3IP-216	ENST00000552199	LRRC75A-AS1	Q8N1F1	130 aa		10.74	□□□□□ -0.69
RAB3IP-216	ENST00000552199	OR4X2	Q8NGF9	303 aa		10.74	□□□□□ -0.69
RAB3IP-216	ENST00000552199	MRPL53	Q96EL3	112 aa	Known RBP	10.74	□□□□□ -0.69
RAB3IP-216	ENST00000552199	PRO1933	Q9H354	126 aa		10.74	□□□□□ -0.69
RAB3IP-216	ENST00000552199		A0A1B0GW15	77 aa		10.74	□□□□□ -0.69
RAB3IP-216	ENST00000552199	CD33	P20138	364 aa		10.74	□□□□□ -0.69
RAB3IP-216	ENST00000552199	BMI1	P35226	326 aa		10.74	□□□□□ -0.69
RAB3IP-216	ENST00000552199	AMT	P48728	403 aa		10.74	□□□□□ -0.69
RAB3IP-216	ENST00000552199	ZNF80	P51504	273 aa	Predicted RBP	10.74	□□□□□ -0.69
RAB3IP-216	ENST00000552199	GATD1	Q8NB37	220 aa		10.74	□□□□□ -0.69
RAB3IP-216	ENST00000552199	NDFIP1	Q9BT67	221 aa		10.74	□□□□□ -0.69
RAB3IP-216	ENST00000552199	CSPG4	Q6UVK1	2322 aa		10.73	□□□□□ -0.69

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