RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 TRGV11A0A075B6L2 103 aa3.57□□□□□ -1.84
HOXB3-213ENST00000552000 GABARAPH6UMI1 98 aa3.57□□□□□ -1.84
HOXB3-213ENST00000552000 CTDSPLO15194 276 aa3.57□□□□□ -1.84
HOXB3-213ENST00000552000 ZNF324O75467 553 aaPredicted RBP3.57□□□□□ -1.84
HOXB3-213ENST00000552000 GABARAPO95166 117 aa3.57□□□□□ -1.84
HOXB3-213ENST00000552000 CRYGDP07320 174 aa3.57□□□□□ -1.84
HOXB3-213ENST00000552000 AQP4P55087 323 aa3.57□□□□□ -1.84
HOXB3-213ENST00000552000 DAZ2Q13117 558 aaKnown RBP3.57□□□□□ -1.84
HOXB3-213ENST00000552000 PSG3Q16557 428 aa3.57□□□□□ -1.84
HOXB3-213ENST00000552000 ANXA2RQ3ZCQ2 193 aa3.57□□□□□ -1.84
HOXB3-213ENST00000552000 GFI1BQ5VTD9 330 aa3.57□□□□□ -1.84
HOXB3-213ENST00000552000 SCXQ7RTU7 201 aa3.57□□□□□ -1.84
HOXB3-213ENST00000552000 LGI3Q8N145 548 aa3.57□□□□□ -1.84
HOXB3-213ENST00000552000 OR1B1Q8NGR6 318 aa3.57□□□□□ -1.84
HOXB3-213ENST00000552000 LHFPL5Q8TAF8 219 aa3.57□□□□□ -1.84
HOXB3-213ENST00000552000 GPX8Q8TED1 209 aa3.57□□□□□ -1.84
HOXB3-213ENST00000552000 ZNF486Q96H40 463 aaPredicted RBP3.57□□□□□ -1.84
HOXB3-213ENST00000552000 TRGV9Q99603 122 aa3.57□□□□□ -1.84
HOXB3-213ENST00000552000 MLST8Q9BVC4 326 aa3.57□□□□□ -1.84
HOXB3-213ENST00000552000 Q9HAA7 133 aa3.57□□□□□ -1.84
HOXB3-213ENST00000552000 COPZ2Q9P299 210 aa3.57□□□□□ -1.84
HOXB3-213ENST00000552000 COX11Q9Y6N1 276 aa3.57□□□□□ -1.84
HOXB3-213ENST00000552000 IGKV1OR2-108A0A075B7D4 117 aa3.56□□□□□ -1.84
HOXB3-213ENST00000552000 TRGV1A0A0A0MS02 117 aa3.56□□□□□ -1.84
HOXB3-213ENST00000552000 LOC100506127A0A0U1RQW1 187 aa3.56□□□□□ -1.84
HOXB3-213ENST00000552000 K7EP13 123 aa3.56□□□□□ -1.84
HOXB3-213ENST00000552000 L7N2F9 121 aa3.56□□□□□ -1.84
HOXB3-213ENST00000552000 PRAF2O60831 178 aa3.56□□□□□ -1.84
HOXB3-213ENST00000552000 IGHV3-53P01767 116 aa3.56□□□□□ -1.84
HOXB3-213ENST00000552000 ORM2P19652 201 aa3.56□□□□□ -1.84
HOXB3-213ENST00000552000 CXCL3P19876 107 aa3.56□□□□□ -1.84
HOXB3-213ENST00000552000 GATA2P23769 480 aaPredicted RBP3.56□□□□□ -1.84
HOXB3-213ENST00000552000 GPX4P36969 197 aaPredicted RBP3.56□□□□□ -1.84
HOXB3-213ENST00000552000 MRPL23Q16540 153 aaKnown RBP3.56□□□□□ -1.84
HOXB3-213ENST00000552000 UBE2NLQ5JXB2 153 aa3.56□□□□□ -1.84
HOXB3-213ENST00000552000 CCDC190Q86UF4 302 aa3.56□□□□□ -1.84
HOXB3-213ENST00000552000 SELENOHQ8IZQ5 122 aaKnown RBP3.56□□□□□ -1.84
HOXB3-213ENST00000552000 C10orf126Q8N4M7 172 aa3.56□□□□□ -1.84
HOXB3-213ENST00000552000 SAMD12Q8N8I0 201 aa3.56□□□□□ -1.84
HOXB3-213ENST00000552000 LRTM2Q8N967 370 aa3.56□□□□□ -1.84
HOXB3-213ENST00000552000 CCDC71LQ8N9Z2 235 aa3.56□□□□□ -1.84
HOXB3-213ENST00000552000 LRRC20Q8TCA0 184 aa3.56□□□□□ -1.84
HOXB3-213ENST00000552000 RPUSD4Q96CM3 377 aaKnown RBP3.56□□□□□ -1.84
HOXB3-213ENST00000552000 GPR82Q96P67 336 aa3.56□□□□□ -1.84
HOXB3-213ENST00000552000 C20orf144Q9BQM9 153 aa3.56□□□□□ -1.84
HOXB3-213ENST00000552000 TMEM222Q9H0R3 208 aa3.56□□□□□ -1.84
HOXB3-213ENST00000552000 GPR132Q9UNW8 380 aa3.56□□□□□ -1.84
HOXB3-213ENST00000552000 FUT9Q9Y231 359 aa3.56□□□□□ -1.84
HOXB3-213ENST00000552000 U3KQ87 197 aa3.56□□□□□ -1.84
HOXB3-213ENST00000552000 TRAV12-3A0A0B4J271 114 aa3.55□□□□□ -1.84
HOXB3-213ENST00000552000 LINC00854A0A1B0GVQ3 168 aa3.55□□□□□ -1.84
HOXB3-213ENST00000552000 VCYO14598 125 aa3.55□□□□□ -1.84
HOXB3-213ENST00000552000 RS1O15537 224 aa3.55□□□□□ -1.84
HOXB3-213ENST00000552000 CDS2O95674 445 aa3.55□□□□□ -1.84
HOXB3-213ENST00000552000 MT1HL1P0DM35 61 aa3.55□□□□□ -1.84
HOXB3-213ENST00000552000 HNRNPA3P51991 378 aaKnown RBP3.55□□□□□ -1.84
HOXB3-213ENST00000552000 CRYBA4P53673 196 aa3.55□□□□□ -1.84
HOXB3-213ENST00000552000 ZNF415Q09FC8 603 aa3.55□□□□□ -1.84
HOXB3-213ENST00000552000 WFDC2Q14508 124 aa3.55□□□□□ -1.84
HOXB3-213ENST00000552000 LINC01620Q4KN68 170 aa3.55□□□□□ -1.84
HOXB3-213ENST00000552000 GGNBP1Q5YKI7 109 aa3.55□□□□□ -1.84
HOXB3-213ENST00000552000 PQLC2Q6ZP29 291 aa3.55□□□□□ -1.84
HOXB3-213ENST00000552000 NEGR1Q7Z3B1 354 aa3.55□□□□□ -1.84
HOXB3-213ENST00000552000 LHFPL1Q86WI0 220 aa3.55□□□□□ -1.84
HOXB3-213ENST00000552000 SNX29P2Q8IUI4 249 aa3.55□□□□□ -1.84
HOXB3-213ENST00000552000 THAP8Q8NA92 274 aa3.55□□□□□ -1.84
HOXB3-213ENST00000552000 BPIFCQ8NFQ6 507 aa3.55□□□□□ -1.84
HOXB3-213ENST00000552000 OR4D5Q8NGN0 318 aa3.55□□□□□ -1.84
HOXB3-213ENST00000552000 OR13C8Q8NGS7 320 aa3.55□□□□□ -1.84
HOXB3-213ENST00000552000 DTD1Q8TEA8 209 aa3.55□□□□□ -1.84
HOXB3-213ENST00000552000 GLYATL2Q8WU03 294 aa3.55□□□□□ -1.84
HOXB3-213ENST00000552000 RBPMSQ93062 196 aaKnown RBP3.55□□□□□ -1.84
HOXB3-213ENST00000552000 TMEM147Q9BVK8 224 aa3.55□□□□□ -1.84
HOXB3-213ENST00000552000 RBKSQ9H477 322 aa3.55□□□□□ -1.84
HOXB3-213ENST00000552000 GSN-AS1Q9NRJ2 163 aa3.55□□□□□ -1.84
HOXB3-213ENST00000552000 PRO0255Q9UI72 69 aa3.55□□□□□ -1.84
HOXB3-213ENST00000552000 PAIP2BQ9ULR5 123 aaKnown RBP3.55□□□□□ -1.84
HOXB3-213ENST00000552000 RCL1Q9Y2P8 373 aaKnown RBP3.55□□□□□ -1.84
HOXB3-213ENST00000552000 CHTOPQ9Y3Y2 248 aaKnown RBP3.55□□□□□ -1.84
HOXB3-213ENST00000552000 TMEM56-RWDD3S4R434 201 aa3.55□□□□□ -1.84
HOXB3-213ENST00000552000 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.54□□□□□ -1.84
HOXB3-213ENST00000552000 TRAV5A0A0B4J249 113 aa3.54□□□□□ -1.84
HOXB3-213ENST00000552000 TEX13DA0A0J9YY54 714 aaPredicted RBP3.54□□□□□ -1.84
HOXB3-213ENST00000552000 PRAC2D3DTV9 90 aa3.54□□□□□ -1.84
HOXB3-213ENST00000552000 E5RGE8 158 aa3.54□□□□□ -1.84
HOXB3-213ENST00000552000 H3BRN7 92 aa3.54□□□□□ -1.84
HOXB3-213ENST00000552000 CFDP00746 253 aaPredicted RBP3.54□□□□□ -1.84
HOXB3-213ENST00000552000 IGLV2-8P01709 118 aa3.54□□□□□ -1.84
HOXB3-213ENST00000552000 SULT1A3P0DMM9 295 aa3.54□□□□□ -1.84
HOXB3-213ENST00000552000 SULT1A4P0DMN0 295 aa3.54□□□□□ -1.84
HOXB3-213ENST00000552000 RPL7P18124 248 aaKnown RBP3.54□□□□□ -1.84
HOXB3-213ENST00000552000 SRIP30626 198 aa3.54□□□□□ -1.84
HOXB3-213ENST00000552000 TGFBR1P36897 503 aa3.54□□□□□ -1.84
HOXB3-213ENST00000552000 SCGB2B2Q4G0G5 96 aa3.54□□□□□ -1.84
HOXB3-213ENST00000552000 RNASE10Q5GAN6 216 aaKnown RBP3.54□□□□□ -1.84
HOXB3-213ENST00000552000 PRR27Q6MZM9 219 aa3.54□□□□□ -1.84
HOXB3-213ENST00000552000 NRARPQ7Z6K4 114 aa3.54□□□□□ -1.84
HOXB3-213ENST00000552000 C11orf72Q8NBR9 251 aa3.54□□□□□ -1.84
HOXB3-213ENST00000552000 ZFAND1Q8TCF1 268 aa3.54□□□□□ -1.84
HOXB3-213ENST00000552000 MARCH1Q8TCQ1 289 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms