RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 BLNKQ8WV28 456 aa12.61□□□□□ -0.39
CDK4-208ENST00000551706 RNF141Q8WVD5 230 aa12.61□□□□□ -0.39
CDK4-208ENST00000551706 AAMDCQ9H7C9 122 aa12.61□□□□□ -0.39
CDK4-208ENST00000551706 AGRNO00468 2067 aa12.61□□□□□ -0.39
CDK4-208ENST00000551706 FRAS1Q86XX4 4008 aa12.6□□□□□ -0.39
CDK4-208ENST00000551706 A0A0J9YWU9 116 aa12.6□□□□□ -0.39
CDK4-208ENST00000551706 ZNF705EA8MWA4 302 aaPredicted RBP12.6□□□□□ -0.39
CDK4-208ENST00000551706 AMBPP02760 352 aa12.6□□□□□ -0.39
CDK4-208ENST00000551706 HIST1H1AQ02539 215 aaPredicted RBP12.6□□□□□ -0.39
CDK4-208ENST00000551706 OR10G4Q8NGN3 311 aa12.6□□□□□ -0.39
CDK4-208ENST00000551706 OR10G9Q8NGN4 311 aa12.6□□□□□ -0.39
CDK4-208ENST00000551706 OR10G7Q8NGN6 311 aa12.6□□□□□ -0.39
CDK4-208ENST00000551706 FXYD5Q96DB9 178 aa12.6□□□□□ -0.39
CDK4-208ENST00000551706 SLC35B3Q9H1N7 401 aa12.6□□□□□ -0.39
CDK4-208ENST00000551706 RFNGQ9Y644 331 aa12.6□□□□□ -0.39
CDK4-208ENST00000551706 NDUFB4O95168 129 aa12.59□□□□□ -0.39
CDK4-208ENST00000551706 RAB2AP61019 212 aa12.59□□□□□ -0.39
CDK4-208ENST00000551706 AMTNQ6UX39 209 aa12.59□□□□□ -0.39
CDK4-208ENST00000551706 PQLC2Q6ZP29 291 aa12.59□□□□□ -0.39
CDK4-208ENST00000551706 TCTE3Q8IZS6 198 aa12.59□□□□□ -0.39
CDK4-208ENST00000551706 KCNRGQ8N5I3 272 aa12.59□□□□□ -0.39
CDK4-208ENST00000551706 OR10J6PQ8NGY7 276 aa12.59□□□□□ -0.39
CDK4-208ENST00000551706 ST6GAL2Q96JF0 529 aa12.59□□□□□ -0.39
CDK4-208ENST00000551706 PPP1R14DQ9NXH3 145 aa12.59□□□□□ -0.39
CDK4-208ENST00000551706 PLECQ15149 4684 aaKnown RBP12.59□□□□□ -0.39
CDK4-208ENST00000551706 A0A0D9SG52 128 aa12.58□□□□□ -0.4
CDK4-208ENST00000551706 ZNF705FA8MVS1 300 aaPredicted RBP12.58□□□□□ -0.4
CDK4-208ENST00000551706 OR10J4P0C629 311 aa12.58□□□□□ -0.4
CDK4-208ENST00000551706 ZNF705DP0CH99 300 aaPredicted RBP12.58□□□□□ -0.4
CDK4-208ENST00000551706 ZNF705BP0CI00 300 aaPredicted RBP12.58□□□□□ -0.4
CDK4-208ENST00000551706 MIFP14174 115 aa12.58□□□□□ -0.4
CDK4-208ENST00000551706 FXYD7P58549 80 aa12.58□□□□□ -0.4
CDK4-208ENST00000551706 UBE2L3P68036 154 aaKnown RBP12.58□□□□□ -0.4
CDK4-208ENST00000551706 FAM122CQ6P4D5 195 aa12.58□□□□□ -0.4
CDK4-208ENST00000551706 ARPC5LQ9BPX5 153 aa12.58□□□□□ -0.4
CDK4-208ENST00000551706 C11orf68Q9H3H3 251 aaKnown RBP12.58□□□□□ -0.4
CDK4-208ENST00000551706 BOLA2-SMG1P6H3BVE0 249 aa12.57□□□□□ -0.4
CDK4-208ENST00000551706 CDC34P49427 236 aaPredicted RBP12.57□□□□□ -0.4
CDK4-208ENST00000551706 LYPD1Q8N2G4 141 aa12.57□□□□□ -0.4
CDK4-208ENST00000551706 OR11H4Q8NGC9 324 aa12.57□□□□□ -0.4
CDK4-208ENST00000551706 ZNF503Q96F45 646 aa12.57□□□□□ -0.4
CDK4-208ENST00000551706 IGF2BP2-AS1Q96M15 143 aa12.57□□□□□ -0.4
CDK4-208ENST00000551706 SH3BGRL3Q9H299 93 aa12.57□□□□□ -0.4
CDK4-208ENST00000551706 GOLT1BQ9Y3E0 138 aa12.57□□□□□ -0.4
CDK4-208ENST00000551706 RYR1P21817 5038 aa12.57□□□□□ -0.4
CDK4-208ENST00000551706 ICAM4Q14773 271 aa12.56□□□□□ -0.4
CDK4-208ENST00000551706 ZFP69Q49AA0 526 aa12.56□□□□□ -0.4
CDK4-208ENST00000551706 ZNF705AQ6ZN79 300 aaPredicted RBP12.56□□□□□ -0.4
CDK4-208ENST00000551706 EXOC3-AS1Q8N2X6 119 aa12.56□□□□□ -0.4
CDK4-208ENST00000551706 RPP25LQ8N5L8 163 aaKnown RBP12.56□□□□□ -0.4
CDK4-208ENST00000551706 CYTL1Q9NRR1 136 aa12.56□□□□□ -0.4
CDK4-208ENST00000551706 X6R8D5 127 aa12.56□□□□□ -0.4
CDK4-208ENST00000551706 PRAC2D3DTV9 90 aa12.55□□□□□ -0.4
CDK4-208ENST00000551706 M0R3E3 92 aa12.55□□□□□ -0.4
CDK4-208ENST00000551706 SPINK13Q1W4C9 94 aa12.55□□□□□ -0.4
CDK4-208ENST00000551706 Q8NAQ8 132 aa12.55□□□□□ -0.4
CDK4-208ENST00000551706 RAB24Q969Q5 203 aa12.55□□□□□ -0.4
CDK4-208ENST00000551706 NEU1Q99519 415 aa12.55□□□□□ -0.4
CDK4-208ENST00000551706 ACTR3CQ9C0K3 210 aaPredicted RBP12.55□□□□□ -0.4
CDK4-208ENST00000551706 ALMS1Q8TCU4 4167 aa12.55□□□□□ -0.4
CDK4-208ENST00000551706 KANTRA0A1W2PQU2 76 aa12.54□□□□□ -0.4
CDK4-208ENST00000551706 SMIM9A6NGZ8 99 aa12.54□□□□□ -0.4
CDK4-208ENST00000551706 M0R2Z0 102 aa12.54□□□□□ -0.4
CDK4-208ENST00000551706 INSP01308 110 aa12.54□□□□□ -0.4
CDK4-208ENST00000551706 STAG3L2P0CL84 134 aa12.54□□□□□ -0.4
CDK4-208ENST00000551706 STAG3L3P0CL85 134 aa12.54□□□□□ -0.4
CDK4-208ENST00000551706 TSPOP30536 169 aa12.54□□□□□ -0.4
CDK4-208ENST00000551706 RANP62826 216 aaKnown RBP12.54□□□□□ -0.4
CDK4-208ENST00000551706 PHYHIPLQ96FC7 376 aa12.54□□□□□ -0.4
CDK4-208ENST00000551706 ODF3Q96PU9 254 aa12.54□□□□□ -0.4
CDK4-208ENST00000551706 IGHV4-28A0A0C4DH34 117 aa12.53□□□□□ -0.4
CDK4-208ENST00000551706 NPIPB6E9PJ23 425 aa12.53□□□□□ -0.4
CDK4-208ENST00000551706 BCL2L11O43521 198 aa12.53□□□□□ -0.4
CDK4-208ENST00000551706 C1QBP02746 253 aa12.53□□□□□ -0.4
CDK4-208ENST00000551706 CDKN1BP46527 198 aa12.53□□□□□ -0.4
CDK4-208ENST00000551706 CSN1S1P47710 185 aa12.53□□□□□ -0.4
CDK4-208ENST00000551706 CD300CQ08708 224 aa12.53□□□□□ -0.4
CDK4-208ENST00000551706 AKR1C8PQ5T2L2 129 aa12.53□□□□□ -0.4
CDK4-208ENST00000551706 TMEM208Q9BTX3 173 aa12.53□□□□□ -0.4
CDK4-208ENST00000551706 Q9H3A6 140 aa12.53□□□□□ -0.4
CDK4-208ENST00000551706 IGHV3OR16-12A0A075B7B8 117 aa12.52□□□□□ -0.41
CDK4-208ENST00000551706 HMGB3O15347 200 aaKnown RBP12.52□□□□□ -0.41
CDK4-208ENST00000551706 CRXO43186 299 aaPredicted RBP12.52□□□□□ -0.41
CDK4-208ENST00000551706 EIF3GO75821 320 aaKnown RBP eCLIP12.52□□□□□ -0.41
CDK4-208ENST00000551706 ARL14EPLP0DKL9 152 aa12.52□□□□□ -0.41
CDK4-208ENST00000551706 PRB4P10163 310 aaPredicted RBP12.52□□□□□ -0.41
CDK4-208ENST00000551706 EIF5AP63241 154 aaKnown RBP12.52□□□□□ -0.41
CDK4-208ENST00000551706 FAM74A1Q5RGS3 127 aa12.52□□□□□ -0.41
CDK4-208ENST00000551706 C1orf158Q8N1D5 194 aa12.52□□□□□ -0.41
CDK4-208ENST00000551706 LINC00477Q96M19 166 aa12.52□□□□□ -0.41
CDK4-208ENST00000551706 TMEM189A5PLL7 270 aa12.51□□□□□ -0.41
CDK4-208ENST00000551706 CXorf1O96002 111 aa12.51□□□□□ -0.41
CDK4-208ENST00000551706 HBE1P02100 147 aa12.51□□□□□ -0.41
CDK4-208ENST00000551706 RBMY1A1P0DJD3 496 aaKnown RBP12.51□□□□□ -0.41
CDK4-208ENST00000551706 RBMY1CP0DJD4 496 aa12.51□□□□□ -0.41
CDK4-208ENST00000551706 LEPP41159 167 aa12.51□□□□□ -0.41
CDK4-208ENST00000551706 RBMY1FQ15415 496 aaKnown RBP12.51□□□□□ -0.41
CDK4-208ENST00000551706 TMEM256Q8N2U0 113 aa12.51□□□□□ -0.41
CDK4-208ENST00000551706 RXFP4Q8TDU9 374 aa12.51□□□□□ -0.41
CDK4-208ENST00000551706 HYLS1Q96M11 299 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 211.5 ms