RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 GFRA4Q9GZZ7 299 aa8.83□□□□□ -1
RAB5C-208ENST00000551338 VPREB3Q9UKI3 123 aa8.83□□□□□ -1
RAB5C-208ENST00000551338 SPTAN1Q13813 2472 aaKnown RBP8.83□□□□□ -1
RAB5C-208ENST00000551338 TRAV8-2A0A0B4J237 113 aa8.82□□□□□ -1
RAB5C-208ENST00000551338 FBLL1A6NHQ2 334 aaKnown RBP8.82□□□□□ -1
RAB5C-208ENST00000551338 J3QKU1 62 aa8.82□□□□□ -1
RAB5C-208ENST00000551338 NUPR1O60356 82 aa8.82□□□□□ -1
RAB5C-208ENST00000551338 CYB5R2Q6BCY4 276 aa8.82□□□□□ -1
RAB5C-208ENST00000551338 UNQ9165/PRO28630Q6UXU0 137 aa8.82□□□□□ -1
RAB5C-208ENST00000551338 ATP5L2Q7Z4Y8 100 aa8.82□□□□□ -1
RAB5C-208ENST00000551338 OR4X2Q8NGF9 303 aa8.82□□□□□ -1
RAB5C-208ENST00000551338 OR2D3Q8NGH3 330 aa8.82□□□□□ -1
RAB5C-208ENST00000551338 PACRGQ96M98 296 aaPredicted RBP8.82□□□□□ -1
RAB5C-208ENST00000551338 PRDM13Q9H4Q3 707 aa8.82□□□□□ -1
RAB5C-208ENST00000551338 SPG11Q96JI7 2443 aa8.82□□□□□ -1
RAB5C-208ENST00000551338 ANKRD17O75179 2603 aaKnown RBP8.81□□□□□ -1
RAB5C-208ENST00000551338 A0A0G2JLM5 398 aa8.81□□□□□ -1
RAB5C-208ENST00000551338 FAM231BA6NCW3 169 aa8.81□□□□□ -1
RAB5C-208ENST00000551338 ZNF705FA8MVS1 300 aaPredicted RBP8.81□□□□□ -1
RAB5C-208ENST00000551338 PRAC2D3DTV9 90 aa8.81□□□□□ -1
RAB5C-208ENST00000551338 F2Z2F3 143 aa8.81□□□□□ -1
RAB5C-208ENST00000551338 SMAD7O15105 426 aaKnown RBP8.81□□□□□ -1
RAB5C-208ENST00000551338 GZMBP10144 247 aa8.81□□□□□ -1
RAB5C-208ENST00000551338 CRISP2P16562 243 aa8.81□□□□□ -1
RAB5C-208ENST00000551338 RAB4BP61018 213 aa8.81□□□□□ -1
RAB5C-208ENST00000551338 Q0VG73 95 aa8.81□□□□□ -1
RAB5C-208ENST00000551338 KIAA1644Q3SXP7 199 aa8.81□□□□□ -1
RAB5C-208ENST00000551338 LCN12Q6JVE5 192 aa8.81□□□□□ -1
RAB5C-208ENST00000551338 CDPF1Q6NVV7 123 aa8.81□□□□□ -1
RAB5C-208ENST00000551338 RNF182Q8N6D2 247 aa8.81□□□□□ -1
RAB5C-208ENST00000551338 Q8TAT8 98 aa8.81□□□□□ -1
RAB5C-208ENST00000551338 PRR25Q96S07 402 aa8.81□□□□□ -1
RAB5C-208ENST00000551338 VGLL1Q99990 258 aa8.81□□□□□ -1
RAB5C-208ENST00000551338 NIT2Q9NQR4 276 aa8.81□□□□□ -1
RAB5C-208ENST00000551338 PCP4L1A6NKN8 68 aa8.8□□□□□ -1
RAB5C-208ENST00000551338 SH2D1AO60880 128 aa8.8□□□□□ -1
RAB5C-208ENST00000551338 ESDP10768 282 aa8.8□□□□□ -1
RAB5C-208ENST00000551338 PSMB8P28062 276 aa8.8□□□□□ -1
RAB5C-208ENST00000551338 SLAQ13239 276 aa8.8□□□□□ -1
RAB5C-208ENST00000551338 FAM209BQ5JX69 171 aa8.8□□□□□ -1
RAB5C-208ENST00000551338 C10orf99Q6UWK7 81 aa8.8□□□□□ -1
RAB5C-208ENST00000551338 RBPMS2Q6ZRY4 209 aaKnown RBP8.8□□□□□ -1
RAB5C-208ENST00000551338 C8orf86Q6ZUL3 223 aa8.8□□□□□ -1
RAB5C-208ENST00000551338 TMEM18Q96B42 140 aa8.8□□□□□ -1
RAB5C-208ENST00000551338 MRPL53Q96EL3 112 aaKnown RBP8.8□□□□□ -1
RAB5C-208ENST00000551338 PGLYRP4Q96LB8 373 aa8.8□□□□□ -1
RAB5C-208ENST00000551338 PSMG3-AS1Q96PY0 264 aa8.8□□□□□ -1
RAB5C-208ENST00000551338 ZNF702PQ9H963 129 aa8.8□□□□□ -1
RAB5C-208ENST00000551338 DOPEY2Q9Y3R5 2298 aa8.79□□□□□ -1
RAB5C-208ENST00000551338 TMEM89A2RUT3 159 aa8.79□□□□□ -1
RAB5C-208ENST00000551338 RBAKDNA6NC62 111 aa8.79□□□□□ -1
RAB5C-208ENST00000551338 HOXA3O43365 443 aaPredicted RBP8.79□□□□□ -1
RAB5C-208ENST00000551338 SERF1AO75920 110 aa8.79□□□□□ -1
RAB5C-208ENST00000551338 APCSP02743 223 aa8.79□□□□□ -1
RAB5C-208ENST00000551338 CT45A10P0DMU9 189 aa8.79□□□□□ -1
RAB5C-208ENST00000551338 SRIP30626 198 aa8.79□□□□□ -1
RAB5C-208ENST00000551338 FOXA3P55318 350 aaPredicted RBP8.79□□□□□ -1
RAB5C-208ENST00000551338 HBBP68871 147 aa8.79□□□□□ -1
RAB5C-208ENST00000551338 SAPCD1Q5SSQ6 148 aa8.79□□□□□ -1
RAB5C-208ENST00000551338 GPHB5Q86YW7 130 aa8.79□□□□□ -1
RAB5C-208ENST00000551338 WFDC11Q8NEX6 87 aa8.79□□□□□ -1
RAB5C-208ENST00000551338 NPFFR1Q9GZQ6 430 aa8.79□□□□□ -1
RAB5C-208ENST00000551338 FAM208BQ5VWN6 2430 aa8.78□□□□□ -1
RAB5C-208ENST00000551338 CAMPP49913 170 aa8.78□□□□□ -1
RAB5C-208ENST00000551338 ZNF80P51504 273 aaPredicted RBP8.78□□□□□ -1
RAB5C-208ENST00000551338 ERCC8Q13216 396 aa8.78□□□□□ -1
RAB5C-208ENST00000551338 OR10J3Q5JRS4 329 aa8.78□□□□□ -1
RAB5C-208ENST00000551338 GATD1Q8NB37 220 aa8.78□□□□□ -1
RAB5C-208ENST00000551338 PEF1Q9UBV8 284 aaKnown RBP8.78□□□□□ -1
RAB5C-208ENST00000551338 CSPG4Q6UVK1 2322 aa8.78□□□□□ -1
RAB5C-208ENST00000551338 ZFYVE26Q68DK2 2539 aa8.78□□□□□ -1
RAB5C-208ENST00000551338 IGHV7-4-1A0A0J9YVY3 117 aa8.77□□□□□ -1.01
RAB5C-208ENST00000551338 SOCS3O14543 225 aa8.77□□□□□ -1.01
RAB5C-208ENST00000551338 JOSD1Q15040 202 aaPredicted RBP8.77□□□□□ -1.01
RAB5C-208ENST00000551338 DNLZQ5SXM8 178 aa8.77□□□□□ -1.01
RAB5C-208ENST00000551338 MYOZ3Q8TDC0 251 aa8.77□□□□□ -1.01
RAB5C-208ENST00000551338 C20orf173Q96LM9 149 aa8.77□□□□□ -1.01
RAB5C-208ENST00000551338 NDFIP1Q9BT67 221 aa8.77□□□□□ -1.01
RAB5C-208ENST00000551338 SSBP4Q9BWG4 385 aaPredicted RBP8.77□□□□□ -1.01
RAB5C-208ENST00000551338 UBR5O95071 2799 aaPredicted RBP8.77□□□□□ -1.01
RAB5C-208ENST00000551338 A0A1W2PS18 150 aa8.76□□□□□ -1.01
RAB5C-208ENST00000551338 TMEM189A5PLL7 270 aa8.76□□□□□ -1.01
RAB5C-208ENST00000551338 HAX1O00165 279 aa8.76□□□□□ -1.01
RAB5C-208ENST00000551338 RPLP1P05386 114 aaKnown RBP8.76□□□□□ -1.01
RAB5C-208ENST00000551338 ARMS2P0C7Q2 107 aa8.76□□□□□ -1.01
RAB5C-208ENST00000551338 EDN2P20800 178 aa8.76□□□□□ -1.01
RAB5C-208ENST00000551338 IQCJQ1A5X6 159 aa8.76□□□□□ -1.01
RAB5C-208ENST00000551338 PRR31Q5SQ13 230 aa8.76□□□□□ -1.01
RAB5C-208ENST00000551338 FAM162BQ5T6X4 162 aa8.76□□□□□ -1.01
RAB5C-208ENST00000551338 IL17RELQ6ZVW7 336 aa8.76□□□□□ -1.01
RAB5C-208ENST00000551338 BAGE3Q86Y29 109 aa8.76□□□□□ -1.01
RAB5C-208ENST00000551338 SIGLECL1Q8N7X8 197 aa8.76□□□□□ -1.01
RAB5C-208ENST00000551338 C18orf32Q8TCD1 76 aa8.76□□□□□ -1.01
RAB5C-208ENST00000551338 RCHY1Q96PM5 261 aa8.76□□□□□ -1.01
RAB5C-208ENST00000551338 AGPAT4-IT1Q9H0P7 198 aa8.76□□□□□ -1.01
RAB5C-208ENST00000551338 CLEC5AQ9NY25 188 aa8.76□□□□□ -1.01
RAB5C-208ENST00000551338 A8MWP6 167 aa8.75□□□□□ -1.01
RAB5C-208ENST00000551338 K7EMT4 169 aa8.75□□□□□ -1.01
RAB5C-208ENST00000551338 S100A12P80511 92 aa8.75□□□□□ -1.01
RAB5C-208ENST00000551338 SRSF2Q01130 221 aaKnown RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms