RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 ERCC8Q13216 396 aa8.4□□□□□ -1.06
SNRPF-203ENST00000551316 LPCAT3Q6P1A2 487 aa8.4□□□□□ -1.06
SNRPF-203ENST00000551316 SDIM1Q6ZPB5 146 aa8.4□□□□□ -1.06
SNRPF-203ENST00000551316 FAM219AQ8IW50 185 aa8.4□□□□□ -1.06
SNRPF-203ENST00000551316 LGI3Q8N145 548 aa8.4□□□□□ -1.06
SNRPF-203ENST00000551316 ODF3Q96PU9 254 aa8.4□□□□□ -1.06
SNRPF-203ENST00000551316 A0A087WYN8 130 aa8.39□□□□□ -1.07
SNRPF-203ENST00000551316 RPL7P18124 248 aaKnown RBP8.39□□□□□ -1.07
SNRPF-203ENST00000551316 GPX4P36969 197 aaPredicted RBP8.39□□□□□ -1.07
SNRPF-203ENST00000551316 TSPAN5P62079 268 aa8.39□□□□□ -1.07
SNRPF-203ENST00000551316 FFAR4Q5NUL3 377 aa8.39□□□□□ -1.07
SNRPF-203ENST00000551316 C9orf163Q8N9P6 203 aa8.39□□□□□ -1.07
SNRPF-203ENST00000551316 LRRC20Q8TCA0 184 aa8.39□□□□□ -1.07
SNRPF-203ENST00000551316 FAM19A4Q96LR4 140 aa8.39□□□□□ -1.07
SNRPF-203ENST00000551316 RBKSQ9H477 322 aa8.39□□□□□ -1.07
SNRPF-203ENST00000551316 DIABLOQ9NR28 239 aa8.39□□□□□ -1.07
SNRPF-203ENST00000551316 A0A0A6YYH2 397 aa8.38□□□□□ -1.07
SNRPF-203ENST00000551316 A6NJ64 397 aa8.38□□□□□ -1.07
SNRPF-203ENST00000551316 PRSS46E5RG02 174 aa8.38□□□□□ -1.07
SNRPF-203ENST00000551316 SLC25A5P05141 298 aaKnown RBP8.38□□□□□ -1.07
SNRPF-203ENST00000551316 PRSS1P07477 247 aa8.38□□□□□ -1.07
SNRPF-203ENST00000551316 RNASE4P34096 147 aaKnown RBP8.38□□□□□ -1.07
SNRPF-203ENST00000551316 DTD1Q8TEA8 209 aa8.38□□□□□ -1.07
SNRPF-203ENST00000551316 TXNL4BQ9NX01 149 aaKnown RBP8.38□□□□□ -1.07
SNRPF-203ENST00000551316 PRR13Q9NZ81 148 aa8.38□□□□□ -1.07
SNRPF-203ENST00000551316 GATA1P15976 413 aaPredicted RBP8.37□□□□□ -1.07
SNRPF-203ENST00000551316 MXD1Q05195 221 aa8.37□□□□□ -1.07
SNRPF-203ENST00000551316 SELENOHQ8IZQ5 122 aaKnown RBP8.37□□□□□ -1.07
SNRPF-203ENST00000551316 BPIFCQ8NFQ6 507 aa8.37□□□□□ -1.07
SNRPF-203ENST00000551316 DUSP21Q9H596 190 aa8.37□□□□□ -1.07
SNRPF-203ENST00000551316 IGHV1OR15-1A0A075B7D0 117 aa8.36□□□□□ -1.07
SNRPF-203ENST00000551316 MPDU1O75352 247 aa8.36□□□□□ -1.07
SNRPF-203ENST00000551316 CDS2O95674 445 aa8.36□□□□□ -1.07
SNRPF-203ENST00000551316 OR4E1P0C645 316 aa8.36□□□□□ -1.07
SNRPF-203ENST00000551316 RCVRNP35243 200 aa8.36□□□□□ -1.07
SNRPF-203ENST00000551316 GGNBP1Q5YKI7 109 aa8.36□□□□□ -1.07
SNRPF-203ENST00000551316 STEAP1BQ6NZ63 245 aa8.36□□□□□ -1.07
SNRPF-203ENST00000551316 PATE2Q6UY27 113 aa8.36□□□□□ -1.07
SNRPF-203ENST00000551316 LHFPL1Q86WI0 220 aa8.36□□□□□ -1.07
SNRPF-203ENST00000551316 GLYATL2Q8WU03 294 aa8.36□□□□□ -1.07
SNRPF-203ENST00000551316 HIGD1AQ9Y241 93 aa8.36□□□□□ -1.07
SNRPF-203ENST00000551316 U3KQ87 197 aa8.36□□□□□ -1.07
SNRPF-203ENST00000551316 TRAV8-1A0A0A6YYK1 113 aa8.35□□□□□ -1.07
SNRPF-203ENST00000551316 TRAV4A0A0B4J268 109 aa8.35□□□□□ -1.07
SNRPF-203ENST00000551316 MUC21A0A0G2JKD1 596 aa8.35□□□□□ -1.07
SNRPF-203ENST00000551316 CRYM-AS1A6NIL9 109 aa8.35□□□□□ -1.07
SNRPF-203ENST00000551316 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.35□□□□□ -1.07
SNRPF-203ENST00000551316 USP17L23D6RBM5 183 aa8.35□□□□□ -1.07
SNRPF-203ENST00000551316 RGS10O43665 173 aa8.35□□□□□ -1.07
SNRPF-203ENST00000551316 OPCMLQ14982 345 aa8.35□□□□□ -1.07
SNRPF-203ENST00000551316 LCN15Q6UWW0 184 aa8.35□□□□□ -1.07
SNRPF-203ENST00000551316 SH2D6Q7Z4S9 175 aa8.35□□□□□ -1.07
SNRPF-203ENST00000551316 ZFAND2AQ8N6M9 145 aa8.35□□□□□ -1.07
SNRPF-203ENST00000551316 SLC25A29Q8N8R3 303 aa8.35□□□□□ -1.07
SNRPF-203ENST00000551316 TMEM222Q9H0R3 208 aa8.35□□□□□ -1.07
SNRPF-203ENST00000551316 HSPB7Q9UBY9 170 aa8.35□□□□□ -1.07
SNRPF-203ENST00000551316 COX11Q9Y6N1 276 aa8.35□□□□□ -1.07
SNRPF-203ENST00000551316 GGTLC3B5MD39 225 aa8.34□□□□□ -1.07
SNRPF-203ENST00000551316 RGS13O14921 159 aa8.34□□□□□ -1.07
SNRPF-203ENST00000551316 CFDP00746 253 aaPredicted RBP8.34□□□□□ -1.07
SNRPF-203ENST00000551316 SDC2P34741 201 aa8.34□□□□□ -1.07
SNRPF-203ENST00000551316 REG3GQ6UW15 175 aa8.34□□□□□ -1.07
SNRPF-203ENST00000551316 ACOT7LQ6ZUV0 252 aa8.34□□□□□ -1.07
SNRPF-203ENST00000551316 OR1S1Q8NH92 325 aa8.34□□□□□ -1.07
SNRPF-203ENST00000551316 SPACA4Q8TDM5 124 aa8.34□□□□□ -1.07
SNRPF-203ENST00000551316 RASL10AQ92737 203 aa8.34□□□□□ -1.07
SNRPF-203ENST00000551316 ARPC5LQ9BPX5 153 aa8.34□□□□□ -1.07
SNRPF-203ENST00000551316 SLC50A1Q9BRV3 221 aa8.34□□□□□ -1.07
SNRPF-203ENST00000551316 VAX2Q9UIW0 290 aa8.34□□□□□ -1.07
SNRPF-203ENST00000551316 SSR3Q9UNL2 185 aa8.34□□□□□ -1.07
SNRPF-203ENST00000551316 H3BQ15 152 aa8.33□□□□□ -1.08
SNRPF-203ENST00000551316 M0R3E3 92 aa8.33□□□□□ -1.08
SNRPF-203ENST00000551316 CXCL2P19875 107 aa8.33□□□□□ -1.08
SNRPF-203ENST00000551316 MUC21Q5SSG8 566 aa8.33□□□□□ -1.08
SNRPF-203ENST00000551316 TMEM268Q5VZI3 342 aa8.33□□□□□ -1.08
SNRPF-203ENST00000551316 FAM122CQ6P4D5 195 aa8.33□□□□□ -1.08
SNRPF-203ENST00000551316 GPX8Q8TED1 209 aa8.33□□□□□ -1.08
SNRPF-203ENST00000551316 ZC2HC1AQ96GY0 325 aa8.33□□□□□ -1.08
SNRPF-203ENST00000551316 ZNF486Q96H40 463 aaPredicted RBP8.33□□□□□ -1.08
SNRPF-203ENST00000551316 GTSF1LQ9H1H1 148 aa8.33□□□□□ -1.08
SNRPF-203ENST00000551316 KLK12Q9UKR0 248 aa8.33□□□□□ -1.08
SNRPF-203ENST00000551316 OR5G3P0C626 314 aa8.32□□□□□ -1.08
SNRPF-203ENST00000551316 IAPPP10997 89 aa8.32□□□□□ -1.08
SNRPF-203ENST00000551316 PRR4Q16378 134 aa8.32□□□□□ -1.08
SNRPF-203ENST00000551316 TOR2AQ5JU69 321 aa8.32□□□□□ -1.08
SNRPF-203ENST00000551316 GPR107Q5VW38 600 aa8.32□□□□□ -1.08
SNRPF-203ENST00000551316 ATRAIDQ6UW56 229 aa8.32□□□□□ -1.08
SNRPF-203ENST00000551316 DPPA3Q6W0C5 159 aa8.32□□□□□ -1.08
SNRPF-203ENST00000551316 OR4C5Q8NGB2 326 aa8.32□□□□□ -1.08
SNRPF-203ENST00000551316 OR13C8Q8NGS7 320 aa8.32□□□□□ -1.08
SNRPF-203ENST00000551316 UBE2WQ96B02 151 aa8.32□□□□□ -1.08
SNRPF-203ENST00000551316 SAT2Q96F10 170 aaPredicted RBP8.32□□□□□ -1.08
SNRPF-203ENST00000551316 SCN3BQ9NY72 215 aa8.32□□□□□ -1.08
SNRPF-203ENST00000551316 PITX3O75364 302 aa8.31□□□□□ -1.08
SNRPF-203ENST00000551316 PFN1P07737 140 aaKnown RBP8.31□□□□□ -1.08
SNRPF-203ENST00000551316 LINC00869P0C866 280 aa8.31□□□□□ -1.08
SNRPF-203ENST00000551316 SULT1A3P0DMM9 295 aa8.31□□□□□ -1.08
SNRPF-203ENST00000551316 SULT1A4P0DMN0 295 aa8.31□□□□□ -1.08
SNRPF-203ENST00000551316 RAP2BP61225 183 aa8.31□□□□□ -1.08
SNRPF-203ENST00000551316 SRSF9Q13242 221 aaKnown RBP eCLIP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms