RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 HRH4Q9H3N8 390 aa9.82□□□□□ -0.84
NUP188-211ENST00000550219 H3BQ15 152 aa9.81□□□□□ -0.84
NUP188-211ENST00000550219 DEFB4AO15263 64 aa9.81□□□□□ -0.84
NUP188-211ENST00000550219 HMGB3O15347 200 aaKnown RBP9.81□□□□□ -0.84
NUP188-211ENST00000550219 CXorf1O96002 111 aa9.81□□□□□ -0.84
NUP188-211ENST00000550219 IFNA7P01567 189 aa9.81□□□□□ -0.84
NUP188-211ENST00000550219 H2AFB1P0C5Y9 115 aa9.81□□□□□ -0.84
NUP188-211ENST00000550219 ARL14EPLP0DKL9 152 aa9.81□□□□□ -0.84
NUP188-211ENST00000550219 PYYP10082 97 aa9.81□□□□□ -0.84
NUP188-211ENST00000550219 ATF4P18848 351 aaPredicted RBP9.81□□□□□ -0.84
NUP188-211ENST00000550219 MEOX2P50222 304 aa9.81□□□□□ -0.84
NUP188-211ENST00000550219 NANOS2P60321 138 aaKnown RBP9.81□□□□□ -0.84
NUP188-211ENST00000550219 LCN15Q6UWW0 184 aa9.81□□□□□ -0.84
NUP188-211ENST00000550219 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.81□□□□□ -0.84
NUP188-211ENST00000550219 OR11H2Q8NH07 326 aa9.81□□□□□ -0.84
NUP188-211ENST00000550219 DCANP1Q8TF63 244 aa9.81□□□□□ -0.84
NUP188-211ENST00000550219 SAT2Q96F10 170 aaPredicted RBP9.81□□□□□ -0.84
NUP188-211ENST00000550219 NRN1Q9NPD7 142 aa9.81□□□□□ -0.84
NUP188-211ENST00000550219 ZNF586Q9NXT0 402 aa9.81□□□□□ -0.84
NUP188-211ENST00000550219 MAP1LC3B2A6NCE7 125 aa9.8□□□□□ -0.84
NUP188-211ENST00000550219 ZNF705EA8MWA4 302 aaPredicted RBP9.8□□□□□ -0.84
NUP188-211ENST00000550219 K7EQG2 157 aa9.8□□□□□ -0.84
NUP188-211ENST00000550219 SOCS3O14543 225 aa9.8□□□□□ -0.84
NUP188-211ENST00000550219 OR7C2O60412 319 aa9.8□□□□□ -0.84
NUP188-211ENST00000550219 NBEAP1P0C6P0 100 aa9.8□□□□□ -0.84
NUP188-211ENST00000550219 GCHFRP30047 84 aa9.8□□□□□ -0.84
NUP188-211ENST00000550219 GUK1Q16774 197 aa9.8□□□□□ -0.84
NUP188-211ENST00000550219 C11orf45Q8TAV5 145 aa9.8□□□□□ -0.84
NUP188-211ENST00000550219 LRRC20Q8TCA0 184 aa9.8□□□□□ -0.84
NUP188-211ENST00000550219 SFT2D1Q8WV19 159 aa9.8□□□□□ -0.84
NUP188-211ENST00000550219 MAP1LC3BQ9GZQ8 125 aa9.8□□□□□ -0.84
NUP188-211ENST00000550219 TRBV19A0A075B6N1 114 aa9.79□□□□□ -0.84
NUP188-211ENST00000550219 ZNF253O75346 499 aa9.79□□□□□ -0.84
NUP188-211ENST00000550219 OR10J4P0C629 311 aa9.79□□□□□ -0.84
NUP188-211ENST00000550219 BLOC1S1P78537 153 aa9.79□□□□□ -0.84
NUP188-211ENST00000550219 PDE6HQ13956 83 aa9.79□□□□□ -0.84
NUP188-211ENST00000550219 SAMD13Q5VXD3 122 aa9.79□□□□□ -0.84
NUP188-211ENST00000550219 STHQ8IWL8 128 aa9.79□□□□□ -0.84
NUP188-211ENST00000550219 LYPD6BQ8NI32 183 aa9.79□□□□□ -0.84
NUP188-211ENST00000550219 C11orf68Q9H3H3 251 aaKnown RBP9.79□□□□□ -0.84
NUP188-211ENST00000550219 NDUFB4O95168 129 aa9.78□□□□□ -0.84
NUP188-211ENST00000550219 FGF8P55075 233 aaPredicted RBP9.78□□□□□ -0.84
NUP188-211ENST00000550219 UBE2L3P68036 154 aaKnown RBP9.78□□□□□ -0.84
NUP188-211ENST00000550219 ZNF767PQ75MW2 155 aa9.78□□□□□ -0.84
NUP188-211ENST00000550219 ZNF331Q9NQX6 463 aaPredicted RBP9.78□□□□□ -0.84
NUP188-211ENST00000550219 TMEM167BQ9NRX6 74 aa9.78□□□□□ -0.84
NUP188-211ENST00000550219 TRAV8-2A0A0B4J237 113 aa9.77□□□□□ -0.85
NUP188-211ENST00000550219 ISLRO14498 428 aa9.77□□□□□ -0.85
NUP188-211ENST00000550219 HBE1P02100 147 aa9.77□□□□□ -0.85
NUP188-211ENST00000550219 SNRPCP09234 159 aaKnown RBP9.77□□□□□ -0.85
NUP188-211ENST00000550219 ZNF688P0C7X2 276 aa9.77□□□□□ -0.85
NUP188-211ENST00000550219 PSMB3P49720 205 aa9.77□□□□□ -0.85
NUP188-211ENST00000550219 SLC50A1Q9BRV3 221 aa9.77□□□□□ -0.85
NUP188-211ENST00000550219 TMPRSS5Q9H3S3 457 aa9.77□□□□□ -0.85
NUP188-211ENST00000550219 KNCNA6PVL3 124 aa9.76□□□□□ -0.85
NUP188-211ENST00000550219 TEX46H3BTG2 121 aa9.76□□□□□ -0.85
NUP188-211ENST00000550219 H3BTX0 84 aa9.76□□□□□ -0.85
NUP188-211ENST00000550219 SLC17A3O00476 420 aa9.76□□□□□ -0.85
NUP188-211ENST00000550219 NMBP08949 121 aa9.76□□□□□ -0.85
NUP188-211ENST00000550219 CCL20P78556 96 aa9.76□□□□□ -0.85
NUP188-211ENST00000550219 LYPD1Q8N2G4 141 aa9.76□□□□□ -0.85
NUP188-211ENST00000550219 BLNKQ8WV28 456 aa9.76□□□□□ -0.85
NUP188-211ENST00000550219 RGS13O14921 159 aa9.75□□□□□ -0.85
NUP188-211ENST00000550219 ID1P41134 155 aa9.75□□□□□ -0.85
NUP188-211ENST00000550219 PSG9Q00887 426 aa9.75□□□□□ -0.85
NUP188-211ENST00000550219 C16orf92Q96LL3 132 aa9.75□□□□□ -0.85
NUP188-211ENST00000550219 CLEC5AQ9NY25 188 aa9.75□□□□□ -0.85
NUP188-211ENST00000550219 ARL2-SNX15V9GYD0 113 aa9.75□□□□□ -0.85
NUP188-211ENST00000550219 IGHV4-28A0A0C4DH34 117 aa9.74□□□□□ -0.85
NUP188-211ENST00000550219 A0A1W2PRE2 83 aa9.74□□□□□ -0.85
NUP188-211ENST00000550219 PPT1P50897 306 aa9.74□□□□□ -0.85
NUP188-211ENST00000550219 ACTL10Q5JWF8 245 aa9.74□□□□□ -0.85
NUP188-211ENST00000550219 LGALS9CQ6DKI2 356 aa9.74□□□□□ -0.85
NUP188-211ENST00000550219 TRPT1Q86TN4 253 aaKnown RBP9.74□□□□□ -0.85
NUP188-211ENST00000550219 C2CD4CQ8TF44 421 aa9.74□□□□□ -0.85
NUP188-211ENST00000550219 C20orf173Q96LM9 149 aa9.74□□□□□ -0.85
NUP188-211ENST00000550219 A0A1B0GV50 99 aa9.73□□□□□ -0.85
NUP188-211ENST00000550219 FAM74A7A6NL05 159 aa9.73□□□□□ -0.85
NUP188-211ENST00000550219 SNRPD3P62318 126 aaKnown RBP9.73□□□□□ -0.85
NUP188-211ENST00000550219 RANP62826 216 aaKnown RBP9.73□□□□□ -0.85
NUP188-211ENST00000550219 PSG3Q16557 428 aa9.73□□□□□ -0.85
NUP188-211ENST00000550219 PSMG4Q5JS54 123 aa9.73□□□□□ -0.85
NUP188-211ENST00000550219 IGFL4Q6B9Z1 124 aa9.73□□□□□ -0.85
NUP188-211ENST00000550219 IQCF2Q8IXL9 164 aa9.73□□□□□ -0.85
NUP188-211ENST00000550219 ARL6IP6Q8N6S5 226 aa9.73□□□□□ -0.85
NUP188-211ENST00000550219 Q8NAQ8 132 aa9.73□□□□□ -0.85
NUP188-211ENST00000550219 MRPL53Q96EL3 112 aaKnown RBP9.73□□□□□ -0.85
NUP188-211ENST00000550219 Q9H3A6 140 aa9.73□□□□□ -0.85
NUP188-211ENST00000550219 OTORQ9NRC9 128 aa9.73□□□□□ -0.85
NUP188-211ENST00000550219 PRELID1Q9Y255 219 aa9.73□□□□□ -0.85
NUP188-211ENST00000550219 YTHDF2Q9Y5A9 579 aaKnown RBP9.73□□□□□ -0.85
NUP188-211ENST00000550219 IGLL5B9A064 214 aa9.72□□□□□ -0.85
NUP188-211ENST00000550219 HLA-DMBP28068 263 aa9.72□□□□□ -0.85
NUP188-211ENST00000550219 CLLU1Q5K131 121 aa9.72□□□□□ -0.85
NUP188-211ENST00000550219 MORN3Q6PF18 240 aaPredicted RBP9.72□□□□□ -0.85
NUP188-211ENST00000550219 EXOC3-AS1Q8N2X6 119 aa9.72□□□□□ -0.85
NUP188-211ENST00000550219 RNF182Q8N6D2 247 aa9.72□□□□□ -0.85
NUP188-211ENST00000550219 PCNPQ8WW12 178 aaKnown RBP9.72□□□□□ -0.85
NUP188-211ENST00000550219 NKX6-2Q9C056 277 aaPredicted RBP9.72□□□□□ -0.85
NUP188-211ENST00000550219 MANBALQ9NQG1 85 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms