RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 KRTAP10-2P60368 255 aa9.38□□□□□ -0.91
TROAP-211ENST00000549891 DAZ2Q13117 558 aaKnown RBP9.38□□□□□ -0.91
TROAP-211ENST00000549891 GUK1Q16774 197 aa9.38□□□□□ -0.91
TROAP-211ENST00000549891 C10orf113Q5VZT2 155 aa9.38□□□□□ -0.91
TROAP-211ENST00000549891 PARD6GQ9BYG4 376 aaPredicted RBP9.38□□□□□ -0.91
TROAP-211ENST00000549891 PTTG2Q9NZH5 202 aa9.38□□□□□ -0.91
TROAP-211ENST00000549891 TRAV12-3A0A0B4J271 114 aa9.37□□□□□ -0.91
TROAP-211ENST00000549891 PRAC2D3DTV9 90 aa9.37□□□□□ -0.91
TROAP-211ENST00000549891 SLC17A3O00476 420 aa9.37□□□□□ -0.91
TROAP-211ENST00000549891 NDUFB6O95139 128 aa9.37□□□□□ -0.91
TROAP-211ENST00000549891 SNRPCP09234 159 aaKnown RBP9.37□□□□□ -0.91
TROAP-211ENST00000549891 OR4E1P0C645 316 aa9.37□□□□□ -0.91
TROAP-211ENST00000549891 RAB31Q13636 194 aa9.37□□□□□ -0.91
TROAP-211ENST00000549891 IAH1Q2TAA2 248 aaPredicted RBP9.37□□□□□ -0.91
TROAP-211ENST00000549891 Q6ZRG5 221 aa9.37□□□□□ -0.91
TROAP-211ENST00000549891 ZNF680Q8NEM1 530 aa9.37□□□□□ -0.91
TROAP-211ENST00000549891 TMPRSS5Q9H3S3 457 aa9.37□□□□□ -0.91
TROAP-211ENST00000549891 TRGV2A0A075B6R0 118 aa9.36□□□□□ -0.91
TROAP-211ENST00000549891 NPIPB6E9PJ23 425 aa9.36□□□□□ -0.91
TROAP-211ENST00000549891 J3KRW8 73 aa9.36□□□□□ -0.91
TROAP-211ENST00000549891 EREGO14944 169 aa9.36□□□□□ -0.91
TROAP-211ENST00000549891 CT45A10P0DMU9 189 aa9.36□□□□□ -0.91
TROAP-211ENST00000549891 IGLC2P0DOY2 106 aa9.36□□□□□ -0.91
TROAP-211ENST00000549891 OPCMLQ14982 345 aa9.36□□□□□ -0.91
TROAP-211ENST00000549891 SPANXN2Q5MJ10 180 aa9.36□□□□□ -0.91
TROAP-211ENST00000549891 ZNF431Q8TF32 576 aaPredicted RBP9.36□□□□□ -0.91
TROAP-211ENST00000549891 TMEM37Q8WXS4 190 aa9.36□□□□□ -0.91
TROAP-211ENST00000549891 C18orf15Q96N68 181 aa9.36□□□□□ -0.91
TROAP-211ENST00000549891 DNAJC4Q9NNZ3 241 aa9.36□□□□□ -0.91
TROAP-211ENST00000549891 A0A096LPF7 62 aa9.35□□□□□ -0.91
TROAP-211ENST00000549891 EPM2AB3EWF7 344 aa9.35□□□□□ -0.91
TROAP-211ENST00000549891 H3BTX0 84 aa9.35□□□□□ -0.91
TROAP-211ENST00000549891 SLC25A5P05141 298 aaKnown RBP9.35□□□□□ -0.91
TROAP-211ENST00000549891 LINC00315P59091 139 aa9.35□□□□□ -0.91
TROAP-211ENST00000549891 TRIQKQ629K1 86 aa9.35□□□□□ -0.91
TROAP-211ENST00000549891 Q6ZTI0 123 aa9.35□□□□□ -0.91
TROAP-211ENST00000549891 ZBTB8BQ8NAP8 495 aaPredicted RBP9.35□□□□□ -0.91
TROAP-211ENST00000549891 OR1L4Q8NGR5 311 aa9.35□□□□□ -0.91
TROAP-211ENST00000549891 SAT2Q96F10 170 aaPredicted RBP9.35□□□□□ -0.91
TROAP-211ENST00000549891 MGST2Q99735 147 aa9.35□□□□□ -0.91
TROAP-211ENST00000549891 PGPEP1Q9NXJ5 209 aa9.35□□□□□ -0.91
TROAP-211ENST00000549891 GSKIPQ9P0R6 139 aa9.35□□□□□ -0.91
TROAP-211ENST00000549891 RCL1Q9Y2P8 373 aaKnown RBP9.35□□□□□ -0.91
TROAP-211ENST00000549891 C7orf66A4D0T2 115 aa9.34□□□□□ -0.91
TROAP-211ENST00000549891 CENPXA8MT69 81 aa9.34□□□□□ -0.91
TROAP-211ENST00000549891 H3BQ15 152 aa9.34□□□□□ -0.91
TROAP-211ENST00000549891 L7N2F9 121 aa9.34□□□□□ -0.91
TROAP-211ENST00000549891 SIVA1O15304 175 aa9.34□□□□□ -0.91
TROAP-211ENST00000549891 ZNF253O75346 499 aa9.34□□□□□ -0.91
TROAP-211ENST00000549891 CAMLGP49069 296 aa9.34□□□□□ -0.91
TROAP-211ENST00000549891 VAMP2P63027 116 aa9.34□□□□□ -0.91
TROAP-211ENST00000549891 MORN5Q5VZ52 161 aa9.34□□□□□ -0.91
TROAP-211ENST00000549891 MRPL53Q96EL3 112 aaKnown RBP9.34□□□□□ -0.91
TROAP-211ENST00000549891 VSIG2Q96IQ7 327 aa9.34□□□□□ -0.91
TROAP-211ENST00000549891 PFDN5Q99471 154 aa9.34□□□□□ -0.91
TROAP-211ENST00000549891 FLVCR2Q9UPI3 526 aa9.34□□□□□ -0.91
TROAP-211ENST00000549891 TRGV1A0A0A0MS02 117 aa9.33□□□□□ -0.92
TROAP-211ENST00000549891 LINC00854A0A1B0GVQ3 168 aa9.33□□□□□ -0.92
TROAP-211ENST00000549891 C7orf71A4D174 169 aa9.33□□□□□ -0.92
TROAP-211ENST00000549891 CCDC160A6NGH7 325 aa9.33□□□□□ -0.92
TROAP-211ENST00000549891 ERVFC1-1P60608 527 aa9.33□□□□□ -0.92
TROAP-211ENST00000549891 ARL16Q0P5N6 197 aa9.33□□□□□ -0.92
TROAP-211ENST00000549891 CNPY1Q3B7I2 92 aa9.33□□□□□ -0.92
TROAP-211ENST00000549891 CDPF1Q6NVV7 123 aa9.33□□□□□ -0.92
TROAP-211ENST00000549891 C12orf45Q8N5I9 185 aaPredicted RBP9.33□□□□□ -0.92
TROAP-211ENST00000549891 LINC00467Q9BRT7 94 aa9.33□□□□□ -0.92
TROAP-211ENST00000549891 SRRQ9GZT4 340 aa9.33□□□□□ -0.92
TROAP-211ENST00000549891 GSN-AS1Q9NRJ2 163 aa9.33□□□□□ -0.92
TROAP-211ENST00000549891 FUT9Q9Y231 359 aa9.33□□□□□ -0.92
TROAP-211ENST00000549891 MBPP02686 304 aaPredicted RBP9.32□□□□□ -0.92
TROAP-211ENST00000549891 ZNF846Q147U1 533 aa9.32□□□□□ -0.92
TROAP-211ENST00000549891 ANXA2RQ3ZCQ2 193 aa9.32□□□□□ -0.92
TROAP-211ENST00000549891 NRARPQ7Z6K4 114 aa9.32□□□□□ -0.92
TROAP-211ENST00000549891 NFE4Q86UQ8 179 aa9.32□□□□□ -0.92
TROAP-211ENST00000549891 EIF4E3Q8N5X7 224 aaKnown RBP9.32□□□□□ -0.92
TROAP-211ENST00000549891 C11orf72Q8NBR9 251 aa9.32□□□□□ -0.92
TROAP-211ENST00000549891 MITD1Q8WV92 249 aa9.32□□□□□ -0.92
TROAP-211ENST00000549891 LINC00477Q96M19 166 aa9.32□□□□□ -0.92
TROAP-211ENST00000549891 PRELID1Q9Y255 219 aa9.32□□□□□ -0.92
TROAP-211ENST00000549891 ICOSQ9Y6W8 199 aa9.32□□□□□ -0.92
TROAP-211ENST00000549891 KLLNB2CW77 178 aa9.31□□□□□ -0.92
TROAP-211ENST00000549891 PAX4O43316 350 aa9.31□□□□□ -0.92
TROAP-211ENST00000549891 BCAP31P51572 246 aa9.31□□□□□ -0.92
TROAP-211ENST00000549891 SLAQ13239 276 aa9.31□□□□□ -0.92
TROAP-211ENST00000549891 MIC13Q5XKP0 118 aa9.31□□□□□ -0.92
TROAP-211ENST00000549891 Q6ZRN7 208 aaPredicted RBP9.31□□□□□ -0.92
TROAP-211ENST00000549891 C20orf85Q9H1P6 137 aa9.31□□□□□ -0.92
TROAP-211ENST00000549891 UQCC1Q9NVA1 299 aa9.31□□□□□ -0.92
TROAP-211ENST00000549891 TRBV19A0A075B6N1 114 aa9.3□□□□□ -0.92
TROAP-211ENST00000549891 TRAV9-2A0A087WT02 112 aa9.3□□□□□ -0.92
TROAP-211ENST00000549891 TRAV5A0A0B4J249 113 aa9.3□□□□□ -0.92
TROAP-211ENST00000549891 SPINK4O60575 86 aa9.3□□□□□ -0.92
TROAP-211ENST00000549891 MPDU1O75352 247 aa9.3□□□□□ -0.92
TROAP-211ENST00000549891 ZNF324O75467 553 aaPredicted RBP9.3□□□□□ -0.92
TROAP-211ENST00000549891 NXPH4O95158 308 aa9.3□□□□□ -0.92
TROAP-211ENST00000549891 GPX1P07203 203 aa9.3□□□□□ -0.92
TROAP-211ENST00000549891 CAV2P51636 162 aa9.3□□□□□ -0.92
TROAP-211ENST00000549891 TCL1AP56279 114 aa9.3□□□□□ -0.92
TROAP-211ENST00000549891 PDE6HQ13956 83 aa9.3□□□□□ -0.92
TROAP-211ENST00000549891 BAK1Q16611 211 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms