RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 CHAC2Q8WUX2 184 aa9.43□□□□□ -0.9
GCN1-206ENST00000549815 C16orf74Q96GX8 76 aa9.43□□□□□ -0.9
GCN1-206ENST00000549815 C20orf144Q9BQM9 153 aa9.43□□□□□ -0.9
GCN1-206ENST00000549815 UQCC1Q9NVA1 299 aa9.43□□□□□ -0.9
GCN1-206ENST00000549815 PPP1R14DQ9NXH3 145 aa9.43□□□□□ -0.9
GCN1-206ENST00000549815 PXMP4Q9Y6I8 212 aa9.43□□□□□ -0.9
GCN1-206ENST00000549815 CBY3A6NI87 242 aa9.42□□□□□ -0.9
GCN1-206ENST00000549815 RPL29P47914 159 aaKnown RBP9.42□□□□□ -0.9
GCN1-206ENST00000549815 RAB32Q13637 225 aa9.42□□□□□ -0.9
GCN1-206ENST00000549815 Q6ZRG5 221 aa9.42□□□□□ -0.9
GCN1-206ENST00000549815 LINC00299Q6ZSB3 139 aa9.42□□□□□ -0.9
GCN1-206ENST00000549815 OR1L4Q8NGR5 311 aa9.42□□□□□ -0.9
GCN1-206ENST00000549815 TMEM263Q8WUH6 116 aaKnown RBP9.42□□□□□ -0.9
GCN1-206ENST00000549815 HSPG2P98160 4391 aa9.41□□□□□ -0.9
GCN1-206ENST00000549815 H7BYZ3 331 aa9.41□□□□□ -0.9
GCN1-206ENST00000549815 ATP5G1P05496 136 aa9.41□□□□□ -0.9
GCN1-206ENST00000549815 PVALBP20472 110 aaPredicted RBP9.41□□□□□ -0.9
GCN1-206ENST00000549815 S100A11P31949 105 aa9.41□□□□□ -0.9
GCN1-206ENST00000549815 ATP5G3P48201 142 aa9.41□□□□□ -0.9
GCN1-206ENST00000549815 FAM3BP58499 235 aaPredicted RBP9.41□□□□□ -0.9
GCN1-206ENST00000549815 S100A10P60903 97 aa9.41□□□□□ -0.9
GCN1-206ENST00000549815 RAB31Q13636 194 aa9.41□□□□□ -0.9
GCN1-206ENST00000549815 GFI1BQ5VTD9 330 aa9.41□□□□□ -0.9
GCN1-206ENST00000549815 ZNF493Q6ZR52 646 aa9.41□□□□□ -0.9
GCN1-206ENST00000549815 LINC00612Q8N6U2 182 aa9.41□□□□□ -0.9
GCN1-206ENST00000549815 PFDN5Q99471 154 aa9.41□□□□□ -0.9
GCN1-206ENST00000549815 SLC39A9Q9NUM3 307 aa9.41□□□□□ -0.9
GCN1-206ENST00000549815 ZNF586Q9NXT0 402 aa9.41□□□□□ -0.9
GCN1-206ENST00000549815 TIMM8BQ9Y5J9 83 aaPredicted RBP9.41□□□□□ -0.9
GCN1-206ENST00000549815 UBE2L5PA0A1B0GUS4 154 aa9.4□□□□□ -0.9
GCN1-206ENST00000549815 FAM240BA0A1B0GVZ2 78 aa9.4□□□□□ -0.9
GCN1-206ENST00000549815 NPIPB6E9PJ23 425 aa9.4□□□□□ -0.9
GCN1-206ENST00000549815 F5H768 121 aa9.4□□□□□ -0.9
GCN1-206ENST00000549815 ZNF253O75346 499 aa9.4□□□□□ -0.9
GCN1-206ENST00000549815 CT45A10P0DMU9 189 aa9.4□□□□□ -0.9
GCN1-206ENST00000549815 HTN1P15515 57 aa9.4□□□□□ -0.9
GCN1-206ENST00000549815 ASAH1Q13510 395 aa9.4□□□□□ -0.9
GCN1-206ENST00000549815 GUK1Q16774 197 aa9.4□□□□□ -0.9
GCN1-206ENST00000549815 OR10J6PQ8NGY7 276 aa9.4□□□□□ -0.9
GCN1-206ENST00000549815 ODF3Q96PU9 254 aa9.4□□□□□ -0.9
GCN1-206ENST00000549815 NOP10Q9NPE3 64 aaKnown RBP9.4□□□□□ -0.9
GCN1-206ENST00000549815 APOBP04114 4563 aaKnown RBP9.39□□□□□ -0.91
GCN1-206ENST00000549815 NDUFB4O95168 129 aa9.39□□□□□ -0.91
GCN1-206ENST00000549815 BAXQ07812 192 aa9.39□□□□□ -0.91
GCN1-206ENST00000549815 ATP6V1FQ16864 119 aa9.39□□□□□ -0.91
GCN1-206ENST00000549815 ZNRF2Q8NHG8 242 aa9.39□□□□□ -0.91
GCN1-206ENST00000549815 RNF141Q8WVD5 230 aa9.39□□□□□ -0.91
GCN1-206ENST00000549815 TMEM14CQ9P0S9 112 aa9.39□□□□□ -0.91
GCN1-206ENST00000549815 TRBV19A0A075B6N1 114 aa9.38□□□□□ -0.91
GCN1-206ENST00000549815 M0R3E3 92 aa9.38□□□□□ -0.91
GCN1-206ENST00000549815 FGF7P21781 194 aa9.38□□□□□ -0.91
GCN1-206ENST00000549815 HBG1P69891 147 aa9.38□□□□□ -0.91
GCN1-206ENST00000549815 HBG2P69892 147 aa9.38□□□□□ -0.91
GCN1-206ENST00000549815 STX12Q86Y82 276 aa9.38□□□□□ -0.91
GCN1-206ENST00000549815 MRPL53Q96EL3 112 aaKnown RBP9.38□□□□□ -0.91
GCN1-206ENST00000549815 FAM19A4Q96LR4 140 aa9.38□□□□□ -0.91
GCN1-206ENST00000549815 MPDU1O75352 247 aa9.37□□□□□ -0.91
GCN1-206ENST00000549815 NUDT3O95989 172 aa9.37□□□□□ -0.91
GCN1-206ENST00000549815 HIST1H1EP10412 219 aaKnown RBP9.37□□□□□ -0.91
GCN1-206ENST00000549815 LEPP41159 167 aa9.37□□□□□ -0.91
GCN1-206ENST00000549815 IFITM3Q01628 133 aa9.37□□□□□ -0.91
GCN1-206ENST00000549815 GCSAMLQ5JQS6 135 aa9.37□□□□□ -0.91
GCN1-206ENST00000549815 MZT2BQ6NZ67 158 aa9.37□□□□□ -0.91
GCN1-206ENST00000549815 S100ZQ8WXG8 99 aa9.37□□□□□ -0.91
GCN1-206ENST00000549815 ATG101Q9BSB4 218 aa9.37□□□□□ -0.91
GCN1-206ENST00000549815 NPCDR1Q9BY65 106 aa9.37□□□□□ -0.91
GCN1-206ENST00000549815 GPN1Q9HCN4 374 aaPredicted RBP9.37□□□□□ -0.91
GCN1-206ENST00000549815 LINC00588Q9Y4M8 146 aa9.37□□□□□ -0.91
GCN1-206ENST00000549815 TRAV12-3A0A0B4J271 114 aa9.36□□□□□ -0.91
GCN1-206ENST00000549815 H0YIZ8 118 aa9.36□□□□□ -0.91
GCN1-206ENST00000549815 J3KRW8 73 aa9.36□□□□□ -0.91
GCN1-206ENST00000549815 MED14OSP0DP75 135 aa9.36□□□□□ -0.91
GCN1-206ENST00000549815 PYYP10082 97 aa9.36□□□□□ -0.91
GCN1-206ENST00000549815 NHLH2Q02577 135 aa9.36□□□□□ -0.91
GCN1-206ENST00000549815 ERCC8Q13216 396 aa9.36□□□□□ -0.91
GCN1-206ENST00000549815 PDE6HQ13956 83 aa9.36□□□□□ -0.91
GCN1-206ENST00000549815 SOHLH1Q5JUK2 328 aa9.36□□□□□ -0.91
GCN1-206ENST00000549815 C1orf134Q5TEV5 83 aa9.36□□□□□ -0.91
GCN1-206ENST00000549815 CCDC28AQ8IWP9 274 aa9.36□□□□□ -0.91
GCN1-206ENST00000549815 FAM167A-AS1Q96KT0 104 aa9.36□□□□□ -0.91
GCN1-206ENST00000549815 SLC25A2Q9BXI2 301 aa9.36□□□□□ -0.91
GCN1-206ENST00000549815 NBDYA0A0U1RRE5 68 aa9.35□□□□□ -0.91
GCN1-206ENST00000549815 KLLNB2CW77 178 aa9.35□□□□□ -0.91
GCN1-206ENST00000549815 UPK1BO75841 260 aa9.35□□□□□ -0.91
GCN1-206ENST00000549815 SIX6O95475 246 aa9.35□□□□□ -0.91
GCN1-206ENST00000549815 HOXA5P20719 270 aa9.35□□□□□ -0.91
GCN1-206ENST00000549815 OR5C1Q8NGR4 320 aa9.35□□□□□ -0.91
GCN1-206ENST00000549815 PYGO2Q9BRQ0 406 aa9.35□□□□□ -0.91
GCN1-206ENST00000549815 OR5AC2Q9NZP5 309 aa9.35□□□□□ -0.91
GCN1-206ENST00000549815 PRELID1Q9Y255 219 aa9.35□□□□□ -0.91
GCN1-206ENST00000549815 GAGE12BA1L429 117 aa9.34□□□□□ -0.91
GCN1-206ENST00000549815 ZNF324O75467 553 aaPredicted RBP9.34□□□□□ -0.91
GCN1-206ENST00000549815 GAGE7O76087 117 aa9.34□□□□□ -0.91
GCN1-206ENST00000549815 SLC25A5P05141 298 aaKnown RBP9.34□□□□□ -0.91
GCN1-206ENST00000549815 GAGE12FP0CL80 117 aa9.34□□□□□ -0.91
GCN1-206ENST00000549815 GAGE12GP0CL81 117 aa9.34□□□□□ -0.91
GCN1-206ENST00000549815 GAGE12IP0CL82 117 aa9.34□□□□□ -0.91
GCN1-206ENST00000549815 DAZ2Q13117 558 aaKnown RBP9.34□□□□□ -0.91
GCN1-206ENST00000549815 MIR17HGQ75NE6 70 aa9.34□□□□□ -0.91
GCN1-206ENST00000549815 EXOC3-AS1Q8N2X6 119 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms