RNA–Protein interactions for RNA: ENST00000549347.1

RAPGEF3-220, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 4

Gene RAPGEF3, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-220ENST00000549347 CSNK1G2-AS1Q8NCQ2 148 aa12.89□□□□□ -0.35
RAPGEF3-220ENST00000549347 PHYHIPLQ96FC7 376 aa12.89□□□□□ -0.35
RAPGEF3-220ENST00000549347 ZNF705FA8MVS1 300 aaPredicted RBP12.88□□□□□ -0.35
RAPGEF3-220ENST00000549347 ZNF705DP0CH99 300 aaPredicted RBP12.88□□□□□ -0.35
RAPGEF3-220ENST00000549347 ZNF705BP0CI00 300 aaPredicted RBP12.88□□□□□ -0.35
RAPGEF3-220ENST00000549347 STAG3L2P0CL84 134 aa12.88□□□□□ -0.35
RAPGEF3-220ENST00000549347 STAG3L3P0CL85 134 aa12.88□□□□□ -0.35
RAPGEF3-220ENST00000549347 HIST1H1AQ02539 215 aaPredicted RBP12.88□□□□□ -0.35
RAPGEF3-220ENST00000549347 TMUB2Q71RG4 321 aa12.88□□□□□ -0.35
RAPGEF3-220ENST00000549347 RAB24Q969Q5 203 aa12.88□□□□□ -0.35
RAPGEF3-220ENST00000549347 HYLS1Q96M11 299 aa12.88□□□□□ -0.35
RAPGEF3-220ENST00000549347 SLC35B3Q9H1N7 401 aa12.88□□□□□ -0.35
RAPGEF3-220ENST00000549347 AAMDCQ9H7C9 122 aa12.88□□□□□ -0.35
RAPGEF3-220ENST00000549347 PRAC2D3DTV9 90 aa12.87□□□□□ -0.35
RAPGEF3-220ENST00000549347 M0R3E3 92 aa12.87□□□□□ -0.35
RAPGEF3-220ENST00000549347 PFDN1O60925 122 aa12.87□□□□□ -0.35
RAPGEF3-220ENST00000549347 AKR1C8PQ5T2L2 129 aa12.87□□□□□ -0.35
RAPGEF3-220ENST00000549347 LYPD1Q8N2G4 141 aa12.87□□□□□ -0.35
RAPGEF3-220ENST00000549347 EXOC3-AS1Q8N2X6 119 aa12.87□□□□□ -0.35
RAPGEF3-220ENST00000549347 ZNF471Q9BX82 626 aaPredicted RBP12.87□□□□□ -0.35
RAPGEF3-220ENST00000549347 ACTR3CQ9C0K3 210 aaPredicted RBP12.87□□□□□ -0.35
RAPGEF3-220ENST00000549347 XCL2Q9UBD3 114 aa12.87□□□□□ -0.35
RAPGEF3-220ENST00000549347 ZNF705EA8MWA4 302 aaPredicted RBP12.86□□□□□ -0.35
RAPGEF3-220ENST00000549347 HMGB3O15347 200 aaKnown RBP12.86□□□□□ -0.35
RAPGEF3-220ENST00000549347 ARL14EPLP0DKL9 152 aa12.86□□□□□ -0.35
RAPGEF3-220ENST00000549347 EIF5AP63241 154 aaKnown RBP12.86□□□□□ -0.35
RAPGEF3-220ENST00000549347 CD300CQ08708 224 aa12.86□□□□□ -0.35
RAPGEF3-220ENST00000549347 ICAM4Q14773 271 aa12.86□□□□□ -0.35
RAPGEF3-220ENST00000549347 LGALSLQ3ZCW2 172 aaPredicted RBP12.86□□□□□ -0.35
RAPGEF3-220ENST00000549347 OR10J6PQ8NGY7 276 aa12.86□□□□□ -0.35
RAPGEF3-220ENST00000549347 OR11H2Q8NH07 326 aa12.86□□□□□ -0.35
RAPGEF3-220ENST00000549347 RARRES2Q99969 163 aa12.86□□□□□ -0.35
RAPGEF3-220ENST00000549347 BOLA2-SMG1P6H3BVE0 249 aa12.85□□□□□ -0.35
RAPGEF3-220ENST00000549347 AMBPP02760 352 aa12.85□□□□□ -0.35
RAPGEF3-220ENST00000549347 SEC11BP0C7V7 166 aa12.85□□□□□ -0.35
RAPGEF3-220ENST00000549347 PRB4P10163 310 aaPredicted RBP12.85□□□□□ -0.35
RAPGEF3-220ENST00000549347 FXYD7P58549 80 aa12.85□□□□□ -0.35
RAPGEF3-220ENST00000549347 ZNF726P1Q15940 193 aa12.85□□□□□ -0.35
RAPGEF3-220ENST00000549347 SSX7Q7RTT5 188 aa12.85□□□□□ -0.35
RAPGEF3-220ENST00000549347 STOML3Q8TAV4 291 aa12.85□□□□□ -0.35
RAPGEF3-220ENST00000549347 Q9H3A6 140 aa12.85□□□□□ -0.35
RAPGEF3-220ENST00000549347 CTXND1A0A1B0GTU2 59 aa12.84□□□□□ -0.35
RAPGEF3-220ENST00000549347 NPIPB6E9PJ23 425 aa12.84□□□□□ -0.35
RAPGEF3-220ENST00000549347 SUN5Q8TC36 379 aa12.84□□□□□ -0.35
RAPGEF3-220ENST00000549347 CXorf1O96002 111 aa12.83□□□□□ -0.36
RAPGEF3-220ENST00000549347 TPT1P13693 172 aaKnown RBP12.83□□□□□ -0.36
RAPGEF3-220ENST00000549347 GCHFRP30047 84 aa12.83□□□□□ -0.36
RAPGEF3-220ENST00000549347 RANP62826 216 aaKnown RBP12.83□□□□□ -0.36
RAPGEF3-220ENST00000549347 SPINK13Q1W4C9 94 aa12.83□□□□□ -0.36
RAPGEF3-220ENST00000549347 ZNF705AQ6ZN79 300 aaPredicted RBP12.83□□□□□ -0.36
RAPGEF3-220ENST00000549347 BAP18Q8IXM2 172 aa12.83□□□□□ -0.36
RAPGEF3-220ENST00000549347 ODF3Q96PU9 254 aa12.83□□□□□ -0.36
RAPGEF3-220ENST00000549347 C11orf68Q9H3H3 251 aaKnown RBP12.83□□□□□ -0.36
RAPGEF3-220ENST00000549347 X6R8D5 127 aa12.83□□□□□ -0.36
RAPGEF3-220ENST00000549347 NBEAL2Q6ZNJ1 2754 aa12.82□□□□□ -0.36
RAPGEF3-220ENST00000549347 A0A0J9YWU9 116 aa12.82□□□□□ -0.36
RAPGEF3-220ENST00000549347 M0R2Z0 102 aa12.82□□□□□ -0.36
RAPGEF3-220ENST00000549347 CRXO43186 299 aaPredicted RBP12.82□□□□□ -0.36
RAPGEF3-220ENST00000549347 ZFP69Q49AA0 526 aa12.82□□□□□ -0.36
RAPGEF3-220ENST00000549347 Q8NAQ8 132 aa12.82□□□□□ -0.36
RAPGEF3-220ENST00000549347 IGF2BP2-AS1Q96M15 143 aa12.82□□□□□ -0.36
RAPGEF3-220ENST00000549347 OTORQ9NRC9 128 aa12.82□□□□□ -0.36
RAPGEF3-220ENST00000549347 TMEM167BQ9NRX6 74 aa12.82□□□□□ -0.36
RAPGEF3-220ENST00000549347 STAB2Q8WWQ8 2551 aa12.82□□□□□ -0.36
RAPGEF3-220ENST00000549347 UMAD1C9J7I0 102 aa12.81□□□□□ -0.36
RAPGEF3-220ENST00000549347 MIFP14174 115 aa12.81□□□□□ -0.36
RAPGEF3-220ENST00000549347 C9orf62Q8N4C0 152 aa12.81□□□□□ -0.36
RAPGEF3-220ENST00000549347 PLA2G2EQ9NZK7 142 aa12.81□□□□□ -0.36
RAPGEF3-220ENST00000549347 IGKV2-40A0A087WW87 121 aaPredicted RBP12.8□□□□□ -0.36
RAPGEF3-220ENST00000549347 INSP01308 110 aa12.8□□□□□ -0.36
RAPGEF3-220ENST00000549347 IGKV2D-40P01614 121 aaPredicted RBP12.8□□□□□ -0.36
RAPGEF3-220ENST00000549347 CDKN1BP46527 198 aa12.8□□□□□ -0.36
RAPGEF3-220ENST00000549347 CSN1S1P47710 185 aa12.8□□□□□ -0.36
RAPGEF3-220ENST00000549347 C9orf47Q6ZRZ4 202 aa12.8□□□□□ -0.36
RAPGEF3-220ENST00000549347 C1orf158Q8N1D5 194 aa12.8□□□□□ -0.36
RAPGEF3-220ENST00000549347 ARL6IP6Q8N6S5 226 aa12.8□□□□□ -0.36
RAPGEF3-220ENST00000549347 NEU1Q99519 415 aa12.8□□□□□ -0.36
RAPGEF3-220ENST00000549347 PPP1R14DQ9NXH3 145 aa12.8□□□□□ -0.36
RAPGEF3-220ENST00000549347 GOLT1BQ9Y3E0 138 aa12.8□□□□□ -0.36
RAPGEF3-220ENST00000549347 DNAH7Q8WXX0 4024 aa12.8□□□□□ -0.36
RAPGEF3-220ENST00000549347 RBAKDNA6NC62 111 aa12.79□□□□□ -0.36
RAPGEF3-220ENST00000549347 MAP1LC3B2A6NCE7 125 aa12.79□□□□□ -0.36
RAPGEF3-220ENST00000549347 CT45A10P0DMU9 189 aa12.79□□□□□ -0.36
RAPGEF3-220ENST00000549347 FAM74A1Q5RGS3 127 aa12.79□□□□□ -0.36
RAPGEF3-220ENST00000549347 SLC51BQ86UW2 128 aa12.79□□□□□ -0.36
RAPGEF3-220ENST00000549347 MUC7Q8TAX7 377 aa12.79□□□□□ -0.36
RAPGEF3-220ENST00000549347 RXFP4Q8TDU9 374 aa12.79□□□□□ -0.36
RAPGEF3-220ENST00000549347 TMED6Q8WW62 240 aa12.79□□□□□ -0.36
RAPGEF3-220ENST00000549347 MAP1LC3BQ9GZQ8 125 aa12.79□□□□□ -0.36
RAPGEF3-220ENST00000549347 IGHV4-28A0A0C4DH34 117 aa12.78□□□□□ -0.36
RAPGEF3-220ENST00000549347 PGPA6NDG6 321 aa12.78□□□□□ -0.36
RAPGEF3-220ENST00000549347 SLC25A5P05141 298 aaKnown RBP12.78□□□□□ -0.36
RAPGEF3-220ENST00000549347 TSPOP30536 169 aa12.78□□□□□ -0.36
RAPGEF3-220ENST00000549347 LEPP41159 167 aa12.78□□□□□ -0.36
RAPGEF3-220ENST00000549347 ERCC8Q13216 396 aa12.78□□□□□ -0.36
RAPGEF3-220ENST00000549347 DPPA3Q6W0C5 159 aa12.78□□□□□ -0.36
RAPGEF3-220ENST00000549347 FAM19A4Q96LR4 140 aa12.78□□□□□ -0.36
RAPGEF3-220ENST00000549347 LINC00477Q96M19 166 aa12.78□□□□□ -0.36
RAPGEF3-220ENST00000549347 AGPAT4-IT1Q9H0P7 198 aa12.78□□□□□ -0.36
RAPGEF3-220ENST00000549347 TRAV12-2A0A075B6T6 113 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms