RNA–Protein interactions for RNA: ENST00000549328.1

CHMP1A-207, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-207ENST00000549328 INMT-MINDY4F8WBC2 141 aa13.21□□□□□ -0.29
CHMP1A-207ENST00000549328 H3BTX0 84 aa13.21□□□□□ -0.29
CHMP1A-207ENST00000549328 HTN3P15516 51 aa13.21□□□□□ -0.29
CHMP1A-207ENST00000549328 AZU1P20160 251 aa13.21□□□□□ -0.29
CHMP1A-207ENST00000549328 NHLH2Q02577 135 aa13.21□□□□□ -0.29
CHMP1A-207ENST00000549328 MARVELD1Q9BSK0 173 aa13.21□□□□□ -0.29
CHMP1A-207ENST00000549328 TMEM14CQ9P0S9 112 aa13.21□□□□□ -0.29
CHMP1A-207ENST00000549328 PLAC8L1A1L4L8 177 aa13.2□□□□□ -0.3
CHMP1A-207ENST00000549328 PRAC2D3DTV9 90 aa13.2□□□□□ -0.3
CHMP1A-207ENST00000549328 H7BYZ3 331 aa13.2□□□□□ -0.3
CHMP1A-207ENST00000549328 SIX6O95475 246 aa13.2□□□□□ -0.3
CHMP1A-207ENST00000549328 ZNF493Q6ZR52 646 aa13.2□□□□□ -0.3
CHMP1A-207ENST00000549328 NPCDR1Q9BY65 106 aa13.2□□□□□ -0.3
CHMP1A-207ENST00000549328 ZNF586Q9NXT0 402 aa13.2□□□□□ -0.3
CHMP1A-207ENST00000549328 PRB4P10163 310 aaPredicted RBP13.19□□□□□ -0.3
CHMP1A-207ENST00000549328 OR5C1Q8NGR4 320 aa13.19□□□□□ -0.3
CHMP1A-207ENST00000549328 C16orf74Q96GX8 76 aa13.19□□□□□ -0.3
CHMP1A-207ENST00000549328 ODF3Q96PU9 254 aa13.19□□□□□ -0.3
CHMP1A-207ENST00000549328 TRBV19A0A075B6N1 114 aa13.18□□□□□ -0.3
CHMP1A-207ENST00000549328 HIST1H1EP10412 219 aaKnown RBP13.18□□□□□ -0.3
CHMP1A-207ENST00000549328 PDE6HQ13956 83 aa13.18□□□□□ -0.3
CHMP1A-207ENST00000549328 RNF212Q495C1 297 aa13.18□□□□□ -0.3
CHMP1A-207ENST00000549328 MRPL53Q96EL3 112 aaKnown RBP13.18□□□□□ -0.3
CHMP1A-207ENST00000549328 OR5AC2Q9NZP5 309 aa13.18□□□□□ -0.3
CHMP1A-207ENST00000549328 TIMM8BQ9Y5J9 83 aaPredicted RBP13.18□□□□□ -0.3
CHMP1A-207ENST00000549328 NPIPB6E9PJ23 425 aa13.17□□□□□ -0.3
CHMP1A-207ENST00000549328 H0YIZ8 118 aa13.17□□□□□ -0.3
CHMP1A-207ENST00000549328 DEFB130BP0DP73 79 aa13.17□□□□□ -0.3
CHMP1A-207ENST00000549328 DEFB130AP0DP74 79 aa13.17□□□□□ -0.3
CHMP1A-207ENST00000549328 HTN1P15515 57 aa13.17□□□□□ -0.3
CHMP1A-207ENST00000549328 DEFA1P59665 94 aa13.17□□□□□ -0.3
CHMP1A-207ENST00000549328 DEFA3P59666 94 aa13.17□□□□□ -0.3
CHMP1A-207ENST00000549328 LRRC37A5PQ49AS3 106 aa13.17□□□□□ -0.3
CHMP1A-207ENST00000549328 TMEM88Q6PEY1 159 aa13.17□□□□□ -0.3
CHMP1A-207ENST00000549328 C15orf53Q8NAA6 179 aa13.17□□□□□ -0.3
CHMP1A-207ENST00000549328 TMEM263Q8WUH6 116 aaKnown RBP13.17□□□□□ -0.3
CHMP1A-207ENST00000549328 PRELID1Q9Y255 219 aa13.17□□□□□ -0.3
CHMP1A-207ENST00000549328 CBY3A6NI87 242 aa13.16□□□□□ -0.3
CHMP1A-207ENST00000549328 CT45A10P0DMU9 189 aa13.16□□□□□ -0.3
CHMP1A-207ENST00000549328 H2BFSP57053 126 aa13.16□□□□□ -0.3
CHMP1A-207ENST00000549328 KIR3DS1Q14943 382 aa13.16□□□□□ -0.3
CHMP1A-207ENST00000549328 GFI1BQ5VTD9 330 aa13.16□□□□□ -0.3
CHMP1A-207ENST00000549328 LINC00336Q6ZUF6 198 aa13.16□□□□□ -0.3
CHMP1A-207ENST00000549328 THAP6Q8TBB0 222 aa13.16□□□□□ -0.3
CHMP1A-207ENST00000549328 RNASE8Q8TDE3 154 aaKnown RBP13.16□□□□□ -0.3
CHMP1A-207ENST00000549328 KCNIP2Q9NS61 270 aa13.16□□□□□ -0.3
CHMP1A-207ENST00000549328 DNAH10Q8IVF4 4471 aa13.15□□□□□ -0.3
CHMP1A-207ENST00000549328 NDUFB4O95168 129 aa13.15□□□□□ -0.3
CHMP1A-207ENST00000549328 ATP5G1P05496 136 aa13.15□□□□□ -0.3
CHMP1A-207ENST00000549328 LEPP41159 167 aa13.15□□□□□ -0.3
CHMP1A-207ENST00000549328 ATP5G3P48201 142 aa13.15□□□□□ -0.3
CHMP1A-207ENST00000549328 FCN2Q15485 313 aa13.15□□□□□ -0.3
CHMP1A-207ENST00000549328 LGALS9BQ3B8N2 356 aa13.15□□□□□ -0.3
CHMP1A-207ENST00000549328 GCSAMLQ5JQS6 135 aa13.15□□□□□ -0.3
CHMP1A-207ENST00000549328 UBE2DNLQ8IWF7 75 aa13.15□□□□□ -0.3
CHMP1A-207ENST00000549328 PPP1R1CQ8WVI7 109 aa13.15□□□□□ -0.3
CHMP1A-207ENST00000549328 PARD6GQ9BYG4 376 aaPredicted RBP13.15□□□□□ -0.3
CHMP1A-207ENST00000549328 TIMM9Q9Y5J7 89 aa13.15□□□□□ -0.3
CHMP1A-207ENST00000549328 DNAH6Q9C0G6 4158 aa13.14□□□□□ -0.31
CHMP1A-207ENST00000549328 CLINT1Q14677 625 aa13.14□□□□□ -0.31
CHMP1A-207ENST00000549328 CCDC28AQ8IWP9 274 aa13.14□□□□□ -0.31
CHMP1A-207ENST00000549328 WDR61Q9GZS3 305 aaKnown RBP13.14□□□□□ -0.31
CHMP1A-207ENST00000549328 BATF3Q9NR55 127 aa13.14□□□□□ -0.31
CHMP1A-207ENST00000549328 M0R3E3 92 aa13.13□□□□□ -0.31
CHMP1A-207ENST00000549328 SSNA1O43805 119 aa13.13□□□□□ -0.31
CHMP1A-207ENST00000549328 PYYP10082 97 aa13.13□□□□□ -0.31
CHMP1A-207ENST00000549328 FAM167A-AS1Q96KT0 104 aa13.13□□□□□ -0.31
CHMP1A-207ENST00000549328 LINC00477Q96M19 166 aa13.13□□□□□ -0.31
CHMP1A-207ENST00000549328 SLC25A2Q9BXI2 301 aa13.13□□□□□ -0.31
CHMP1A-207ENST00000549328 NOP10Q9NPE3 64 aaKnown RBP13.13□□□□□ -0.31
CHMP1A-207ENST00000549328 C17orf112F2Z3M2 114 aa13.12□□□□□ -0.31
CHMP1A-207ENST00000549328 F5H768 121 aa13.12□□□□□ -0.31
CHMP1A-207ENST00000549328 MPC2O95563 127 aa13.12□□□□□ -0.31
CHMP1A-207ENST00000549328 PET100P0DJ07 73 aa13.12□□□□□ -0.31
CHMP1A-207ENST00000549328 FAM3BP58499 235 aaPredicted RBP13.12□□□□□ -0.31
CHMP1A-207ENST00000549328 PYGO2Q9BRQ0 406 aa13.12□□□□□ -0.31
CHMP1A-207ENST00000549328 MRPL32Q9BYC8 188 aaKnown RBP13.12□□□□□ -0.31
CHMP1A-207ENST00000549328 AAMDCQ9H7C9 122 aa13.12□□□□□ -0.31
CHMP1A-207ENST00000549328 TRAV12-3A0A0B4J271 114 aa13.11□□□□□ -0.31
CHMP1A-207ENST00000549328 SLC25A5P05141 298 aaKnown RBP13.11□□□□□ -0.31
CHMP1A-207ENST00000549328 NBEAP1P0C6P0 100 aa13.11□□□□□ -0.31
CHMP1A-207ENST00000549328 MIR17HGQ75NE6 70 aa13.11□□□□□ -0.31
CHMP1A-207ENST00000549328 BLNKQ8WV28 456 aa13.11□□□□□ -0.31
CHMP1A-207ENST00000549328 OR51M1Q9H341 326 aa13.11□□□□□ -0.31
CHMP1A-207ENST00000549328 M0R2N4 97 aa13.1□□□□□ -0.31
CHMP1A-207ENST00000549328 C9orf47Q6ZRZ4 202 aa13.1□□□□□ -0.31
CHMP1A-207ENST00000549328 EXOC3-AS1Q8N2X6 119 aa13.1□□□□□ -0.31
CHMP1A-207ENST00000549328 LINC00612Q8N6U2 182 aa13.1□□□□□ -0.31
CHMP1A-207ENST00000549328 FAM19A4Q96LR4 140 aa13.1□□□□□ -0.31
CHMP1A-207ENST00000549328 ATP5SQ99766 215 aa13.1□□□□□ -0.31
CHMP1A-207ENST00000549328 AGPAT4-IT1Q9H0P7 198 aa13.1□□□□□ -0.31
CHMP1A-207ENST00000549328 HSPB11Q9Y547 144 aa13.1□□□□□ -0.31
CHMP1A-207ENST00000549328 SNURFLB1AK76 121 aa13.09□□□□□ -0.31
CHMP1A-207ENST00000549328 KLLNB2CW77 178 aa13.09□□□□□ -0.31
CHMP1A-207ENST00000549328 J3KRW8 73 aa13.09□□□□□ -0.31
CHMP1A-207ENST00000549328 NMBP08949 121 aa13.09□□□□□ -0.31
CHMP1A-207ENST00000549328 ERCC8Q13216 396 aa13.09□□□□□ -0.31
CHMP1A-207ENST00000549328 ICAM4Q14773 271 aa13.09□□□□□ -0.31
CHMP1A-207ENST00000549328 Q6ZR54 194 aa13.09□□□□□ -0.31
CHMP1A-207ENST00000549328 FUT9Q9Y231 359 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 172.5 ms