RNA–Protein interactions for RNA: ENST00000549131.1

LINC00661-203, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-203ENST00000549131 MARVELD1Q9BSK0 173 aa10.47□□□□□ -0.73
LINC00661-203ENST00000549131 PLA2G2EQ9NZK7 142 aa10.47□□□□□ -0.73
LINC00661-203ENST00000549131 PRAC2D3DTV9 90 aa10.46□□□□□ -0.73
LINC00661-203ENST00000549131 HTN1P15515 57 aa10.46□□□□□ -0.73
LINC00661-203ENST00000549131 H2BFSP57053 126 aa10.46□□□□□ -0.73
LINC00661-203ENST00000549131 GCSAMLQ5JQS6 135 aa10.46□□□□□ -0.73
LINC00661-203ENST00000549131 TMEM256Q8N2U0 113 aa10.46□□□□□ -0.73
LINC00661-203ENST00000549131 CHAC2Q8WUX2 184 aa10.46□□□□□ -0.73
LINC00661-203ENST00000549131 PPP1R1CQ8WVI7 109 aa10.46□□□□□ -0.73
LINC00661-203ENST00000549131 SAT2Q96F10 170 aaPredicted RBP10.46□□□□□ -0.73
LINC00661-203ENST00000549131 LINC01587Q99440 93 aa10.46□□□□□ -0.73
LINC00661-203ENST00000549131 PARD6GQ9BYG4 376 aaPredicted RBP10.46□□□□□ -0.73
LINC00661-203ENST00000549131 BATF3Q9NR55 127 aa10.46□□□□□ -0.73
LINC00661-203ENST00000549131 ZNF586Q9NXT0 402 aa10.46□□□□□ -0.73
LINC00661-203ENST00000549131 H0YIZ8 118 aa10.45□□□□□ -0.74
LINC00661-203ENST00000549131 PET100P0DJ07 73 aa10.45□□□□□ -0.74
LINC00661-203ENST00000549131 OXA1LQ15070 435 aa10.45□□□□□ -0.74
LINC00661-203ENST00000549131 KCNIP2Q9NS61 270 aa10.45□□□□□ -0.74
LINC00661-203ENST00000549131 J3KRW8 73 aa10.44□□□□□ -0.74
LINC00661-203ENST00000549131 ZNF253O75346 499 aa10.44□□□□□ -0.74
LINC00661-203ENST00000549131 P0DMU3 169 aa10.44□□□□□ -0.74
LINC00661-203ENST00000549131 FAM231AP0DMU4 169 aa10.44□□□□□ -0.74
LINC00661-203ENST00000549131 FAM231CP0DMU5 169 aa10.44□□□□□ -0.74
LINC00661-203ENST00000549131 PYYP10082 97 aa10.44□□□□□ -0.74
LINC00661-203ENST00000549131 TSPOP30536 169 aa10.44□□□□□ -0.74
LINC00661-203ENST00000549131 BLNKQ8WV28 456 aa10.44□□□□□ -0.74
LINC00661-203ENST00000549131 TMEM14CQ9P0S9 112 aa10.44□□□□□ -0.74
LINC00661-203ENST00000549131 DNAH10Q8IVF4 4471 aa10.44□□□□□ -0.74
LINC00661-203ENST00000549131 TRBV19A0A075B6N1 114 aa10.43□□□□□ -0.74
LINC00661-203ENST00000549131 LYRM9A8MSI8 78 aa10.43□□□□□ -0.74
LINC00661-203ENST00000549131 DEFB130BP0DP73 79 aa10.43□□□□□ -0.74
LINC00661-203ENST00000549131 DEFB130AP0DP74 79 aa10.43□□□□□ -0.74
LINC00661-203ENST00000549131 AZU1P20160 251 aa10.43□□□□□ -0.74
LINC00661-203ENST00000549131 TAS2R60P59551 318 aa10.43□□□□□ -0.74
LINC00661-203ENST00000549131 UBE2DNLQ8IWF7 75 aa10.43□□□□□ -0.74
LINC00661-203ENST00000549131 C16orf74Q96GX8 76 aa10.43□□□□□ -0.74
LINC00661-203ENST00000549131 ATP5SQ99766 215 aa10.43□□□□□ -0.74
LINC00661-203ENST00000549131 WDR61Q9GZS3 305 aaKnown RBP10.43□□□□□ -0.74
LINC00661-203ENST00000549131 TIMM9Q9Y5J7 89 aa10.43□□□□□ -0.74
LINC00661-203ENST00000549131 NPIPB6E9PJ23 425 aa10.42□□□□□ -0.74
LINC00661-203ENST00000549131 C17orf112F2Z3M2 114 aa10.42□□□□□ -0.74
LINC00661-203ENST00000549131 H7BYZ3 331 aa10.42□□□□□ -0.74
LINC00661-203ENST00000549131 M0R3E3 92 aa10.42□□□□□ -0.74
LINC00661-203ENST00000549131 MPC2O95563 127 aa10.42□□□□□ -0.74
LINC00661-203ENST00000549131 HIST1H1EP10412 219 aaKnown RBP10.42□□□□□ -0.74
LINC00661-203ENST00000549131 LEPP41159 167 aa10.42□□□□□ -0.74
LINC00661-203ENST00000549131 KIR3DS1Q14943 382 aa10.42□□□□□ -0.74
LINC00661-203ENST00000549131 GFI1BQ5VTD9 330 aa10.42□□□□□ -0.74
LINC00661-203ENST00000549131 MIR17HGQ75NE6 70 aa10.42□□□□□ -0.74
LINC00661-203ENST00000549131 MRPL53Q96EL3 112 aaKnown RBP10.42□□□□□ -0.74
LINC00661-203ENST00000549131 FAM210BQ96KR6 192 aa10.42□□□□□ -0.74
LINC00661-203ENST00000549131 SLC25A2Q9BXI2 301 aa10.42□□□□□ -0.74
LINC00661-203ENST00000549131 NACAE9PAV3 2078 aa10.42□□□□□ -0.74
LINC00661-203ENST00000549131 PLAC8L1A1L4L8 177 aa10.41□□□□□ -0.74
LINC00661-203ENST00000549131 PDE6HQ13956 83 aa10.41□□□□□ -0.74
LINC00661-203ENST00000549131 TMEM88Q6PEY1 159 aa10.41□□□□□ -0.74
LINC00661-203ENST00000549131 POM121L12Q8N7R1 296 aa10.41□□□□□ -0.74
LINC00661-203ENST00000549131 TMEM263Q8WUH6 116 aaKnown RBP10.41□□□□□ -0.74
LINC00661-203ENST00000549131 C20orf144Q9BQM9 153 aa10.41□□□□□ -0.74
LINC00661-203ENST00000549131 MRPL32Q9BYC8 188 aaKnown RBP10.41□□□□□ -0.74
LINC00661-203ENST00000549131 SMIM3Q9BZL3 60 aa10.41□□□□□ -0.74
LINC00661-203ENST00000549131 AAMDCQ9H7C9 122 aa10.41□□□□□ -0.74
LINC00661-203ENST00000549131 MBD2Q9UBB5 411 aa10.41□□□□□ -0.74
LINC00661-203ENST00000549131 HSPB11Q9Y547 144 aa10.41□□□□□ -0.74
LINC00661-203ENST00000549131 NDUFB4O95168 129 aa10.4□□□□□ -0.74
LINC00661-203ENST00000549131 CT45A10P0DMU9 189 aa10.4□□□□□ -0.74
LINC00661-203ENST00000549131 FCN2Q15485 313 aa10.4□□□□□ -0.74
LINC00661-203ENST00000549131 EXOC3-AS1Q8N2X6 119 aa10.4□□□□□ -0.74
LINC00661-203ENST00000549131 RNASE8Q8TDE3 154 aaKnown RBP10.4□□□□□ -0.74
LINC00661-203ENST00000549131 ODF3Q96PU9 254 aa10.4□□□□□ -0.74
LINC00661-203ENST00000549131 TRAV12-3A0A0B4J271 114 aa10.39□□□□□ -0.75
LINC00661-203ENST00000549131 RPL12P30050 165 aaKnown RBP10.39□□□□□ -0.75
LINC00661-203ENST00000549131 ZNF493Q6ZR52 646 aa10.39□□□□□ -0.75
LINC00661-203ENST00000549131 FAM167A-AS1Q96KT0 104 aa10.39□□□□□ -0.75
LINC00661-203ENST00000549131 FUT9Q9Y231 359 aa10.39□□□□□ -0.75
LINC00661-203ENST00000549131 PRELID1Q9Y255 219 aa10.39□□□□□ -0.75
LINC00661-203ENST00000549131 TIMM8BQ9Y5J9 83 aaPredicted RBP10.39□□□□□ -0.75
LINC00661-203ENST00000549131 ALG5Q9Y673 324 aa10.39□□□□□ -0.75
LINC00661-203ENST00000549131 F5H768 121 aa10.38□□□□□ -0.75
LINC00661-203ENST00000549131 OR7C2O60412 319 aa10.38□□□□□ -0.75
LINC00661-203ENST00000549131 IFNA5P01569 189 aa10.38□□□□□ -0.75
LINC00661-203ENST00000549131 ATP5G1P05496 136 aa10.38□□□□□ -0.75
LINC00661-203ENST00000549131 OR10J4P0C629 311 aa10.38□□□□□ -0.75
LINC00661-203ENST00000549131 ATP5G3P48201 142 aa10.38□□□□□ -0.75
LINC00661-203ENST00000549131 ERCC8Q13216 396 aa10.38□□□□□ -0.75
LINC00661-203ENST00000549131 ICAM4Q14773 271 aa10.38□□□□□ -0.75
LINC00661-203ENST00000549131 FFAR4Q5NUL3 377 aa10.38□□□□□ -0.75
LINC00661-203ENST00000549131 FAM122CQ6P4D5 195 aa10.38□□□□□ -0.75
LINC00661-203ENST00000549131 CCDC28AQ8IWP9 274 aa10.38□□□□□ -0.75
LINC00661-203ENST00000549131 PAXXQ9BUH6 204 aa10.38□□□□□ -0.75
LINC00661-203ENST00000549131 OR51M1Q9H341 326 aa10.38□□□□□ -0.75
LINC00661-203ENST00000549131 NOP10Q9NPE3 64 aaKnown RBP10.38□□□□□ -0.75
LINC00661-203ENST00000549131 IGKV2-40A0A087WW87 121 aaPredicted RBP10.37□□□□□ -0.75
LINC00661-203ENST00000549131 PTTG1O95997 202 aa10.37□□□□□ -0.75
LINC00661-203ENST00000549131 IGKV2D-40P01614 121 aaPredicted RBP10.37□□□□□ -0.75
LINC00661-203ENST00000549131 UBE2L3P68036 154 aaKnown RBP10.37□□□□□ -0.75
LINC00661-203ENST00000549131 C15orf53Q8NAA6 179 aa10.37□□□□□ -0.75
LINC00661-203ENST00000549131 SCGB1C1Q8TD33 95 aa10.37□□□□□ -0.75
LINC00661-203ENST00000549131 PHYHIPLQ96FC7 376 aa10.37□□□□□ -0.75
LINC00661-203ENST00000549131 HECTD4Q9Y4D8 3996 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms