RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 C15orf32Q32M92 178 aa11.25□□□□□ -0.61
CACNB3-209ENST00000548860 NUP37Q8NFH4 326 aa11.25□□□□□ -0.61
CACNB3-209ENST00000548860 SHISA9B4DS77 424 aa11.25□□□□□ -0.61
CACNB3-209ENST00000548860 SYS1-DBNDD2H3BUS1 97 aa11.25□□□□□ -0.61
CACNB3-209ENST00000548860 IGLC1P0CG04 106 aa11.25□□□□□ -0.61
CACNB3-209ENST00000548860 RHOGP84095 191 aa11.25□□□□□ -0.61
CACNB3-209ENST00000548860 ANKRD39Q53RE8 183 aa11.25□□□□□ -0.61
CACNB3-209ENST00000548860 AMMECR1LQ6DCA0 310 aa11.25□□□□□ -0.61
CACNB3-209ENST00000548860 TEX43Q6ZNM6 134 aa11.25□□□□□ -0.61
CACNB3-209ENST00000548860 TRGV9Q99603 122 aa11.25□□□□□ -0.61
CACNB3-209ENST00000548860 IGHV1-24A0A0C4DH33 117 aa11.25□□□□□ -0.61
CACNB3-209ENST00000548860 DEFB1P60022 68 aa11.25□□□□□ -0.61
CACNB3-209ENST00000548860 FAM71F2Q6NXP2 309 aa11.25□□□□□ -0.61
CACNB3-209ENST00000548860 C20orf144Q9BQM9 153 aa11.25□□□□□ -0.61
CACNB3-209ENST00000548860 ATP5IP56385 69 aaPredicted RBP11.24□□□□□ -0.61
CACNB3-209ENST00000548860 POU2AF1Q16633 256 aa11.24□□□□□ -0.61
CACNB3-209ENST00000548860 VMO1Q7Z5L0 202 aa11.24□□□□□ -0.61
CACNB3-209ENST00000548860 IGF2BP2-AS1Q96M15 143 aa11.24□□□□□ -0.61
CACNB3-209ENST00000548860 KIR2DL5BA0A0G2JN68 375 aa11.24□□□□□ -0.61
CACNB3-209ENST00000548860 KIR2DL5BA0A0G2JPC4 375 aa11.24□□□□□ -0.61
CACNB3-209ENST00000548860 GOSR1O95249 250 aa11.24□□□□□ -0.61
CACNB3-209ENST00000548860 RPL7P18124 248 aaKnown RBP11.24□□□□□ -0.61
CACNB3-209ENST00000548860 KIR2DL5AQ8N109 375 aa11.24□□□□□ -0.61
CACNB3-209ENST00000548860 FAM169BQ8N8A8 192 aa11.24□□□□□ -0.61
CACNB3-209ENST00000548860 MSRB1Q9NZV6 116 aa11.24□□□□□ -0.61
CACNB3-209ENST00000548860 LY96Q9Y6Y9 160 aa11.24□□□□□ -0.61
CACNB3-209ENST00000548860 IGKV1-17P01599 117 aa11.23□□□□□ -0.61
CACNB3-209ENST00000548860 FER1L6-AS1Q8NA97 138 aa11.23□□□□□ -0.61
CACNB3-209ENST00000548860 IGLV2-23P01705 113 aa11.23□□□□□ -0.61
CACNB3-209ENST00000548860 FAM106CPP0CH98 169 aa11.23□□□□□ -0.61
CACNB3-209ENST00000548860 FAM106AQ4KMX7 169 aa11.23□□□□□ -0.61
CACNB3-209ENST00000548860 LDLRAD2Q5SZI1 272 aa11.23□□□□□ -0.61
CACNB3-209ENST00000548860 ITGB1BP1O14713 200 aa11.23□□□□□ -0.61
CACNB3-209ENST00000548860 TOMM40O96008 361 aa11.23□□□□□ -0.61
CACNB3-209ENST00000548860 FAM120AOSQ5T036 256 aa11.23□□□□□ -0.61
CACNB3-209ENST00000548860 TMEM78Q5T7P6 136 aa11.23□□□□□ -0.61
CACNB3-209ENST00000548860 VGLL1Q99990 258 aa11.23□□□□□ -0.61
CACNB3-209ENST00000548860 VWC2LB2RUY7 222 aa11.22□□□□□ -0.61
CACNB3-209ENST00000548860 SH2D1AO60880 128 aa11.22□□□□□ -0.61
CACNB3-209ENST00000548860 GATA1P15976 413 aaPredicted RBP11.22□□□□□ -0.61
CACNB3-209ENST00000548860 ZNF414Q96IQ9 312 aa11.22□□□□□ -0.61
CACNB3-209ENST00000548860 C5orf64Q2M2E5 130 aa11.22□□□□□ -0.61
CACNB3-209ENST00000548860 TTTY13Q9BZ97 58 aa11.22□□□□□ -0.61
CACNB3-209ENST00000548860 H3BUT2 72 aa11.22□□□□□ -0.61
CACNB3-209ENST00000548860 Q8NA96 180 aa11.22□□□□□ -0.61
CACNB3-209ENST00000548860 TCF15Q12870 199 aa11.21□□□□□ -0.61
CACNB3-209ENST00000548860 IGFL3Q6UXB1 125 aa11.21□□□□□ -0.61
CACNB3-209ENST00000548860 FOXC2Q99958 501 aa11.21□□□□□ -0.61
CACNB3-209ENST00000548860 TRAV26-2A0A0B4J265 109 aa11.21□□□□□ -0.61
CACNB3-209ENST00000548860 GAGE10A6NGK3 116 aa11.21□□□□□ -0.61
CACNB3-209ENST00000548860 FCN3O75636 299 aa11.21□□□□□ -0.61
CACNB3-209ENST00000548860 TMEM30BQ3MIR4 351 aa11.21□□□□□ -0.61
CACNB3-209ENST00000548860 FAM74A4Q5TZK3 123 aa11.21□□□□□ -0.61
CACNB3-209ENST00000548860 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.21□□□□□ -0.61
CACNB3-209ENST00000548860 MAPK1IP1LQ8NDC0 245 aa11.21□□□□□ -0.61
CACNB3-209ENST00000548860 C1RLQ9NZP8 487 aa11.21□□□□□ -0.61
CACNB3-209ENST00000548860 CCDC144NLQ6NUI1 221 aa11.21□□□□□ -0.62
CACNB3-209ENST00000548860 ORMDL3Q8N138 153 aa11.21□□□□□ -0.62
CACNB3-209ENST00000548860 HIST1H1AQ02539 215 aaPredicted RBP11.2□□□□□ -0.62
CACNB3-209ENST00000548860 LEPP41159 167 aa11.2□□□□□ -0.62
CACNB3-209ENST00000548860 VKORC1Q9BQB6 163 aa11.2□□□□□ -0.62
CACNB3-209ENST00000548860 ZFP30Q9Y2G7 519 aa11.2□□□□□ -0.62
CACNB3-209ENST00000548860 TRGV3P03979 118 aa11.2□□□□□ -0.62
CACNB3-209ENST00000548860 PAX1P15863 534 aa11.2□□□□□ -0.62
CACNB3-209ENST00000548860 ZNF502Q8TBZ5 544 aa11.2□□□□□ -0.62
CACNB3-209ENST00000548860 TRBV19A0A075B6N1 114 aa11.19□□□□□ -0.62
CACNB3-209ENST00000548860 NDUFA3O95167 84 aa11.19□□□□□ -0.62
CACNB3-209ENST00000548860 LOXL1Q08397 574 aaPredicted RBP11.19□□□□□ -0.62
CACNB3-209ENST00000548860 CR1LQ2VPA4 569 aa11.19□□□□□ -0.62
CACNB3-209ENST00000548860 ZNF491Q8N8L2 437 aa11.19□□□□□ -0.62
CACNB3-209ENST00000548860 CSMD1Q96PZ7 3565 aa11.19□□□□□ -0.62
CACNB3-209ENST00000548860 CDSNQ15517 529 aa11.19□□□□□ -0.62
CACNB3-209ENST00000548860 DUX5Q96PT3 197 aa11.19□□□□□ -0.62
CACNB3-209ENST00000548860 BPESC1Q9GZL8 116 aa11.19□□□□□ -0.62
CACNB3-209ENST00000548860 HIVEP2P31629 2446 aa11.19□□□□□ -0.62
CACNB3-209ENST00000548860 EMP1P54849 157 aa11.19□□□□□ -0.62
CACNB3-209ENST00000548860 DLX6P56179 175 aa11.19□□□□□ -0.62
CACNB3-209ENST00000548860 PSG3Q16557 428 aa11.19□□□□□ -0.62
CACNB3-209ENST00000548860 TMEM249Q2WGJ8 235 aa11.19□□□□□ -0.62
CACNB3-209ENST00000548860 MTURNQ8N3F0 131 aa11.19□□□□□ -0.62
CACNB3-209ENST00000548860 GP9P14770 177 aa11.19□□□□□ -0.62
CACNB3-209ENST00000548860 GTSCR1Q86UQ5 136 aa11.19□□□□□ -0.62
CACNB3-209ENST00000548860 TNRC6BQ9UPQ9 1833 aaKnown RBP11.18□□□□□ -0.62
CACNB3-209ENST00000548860 H3BVH4 76 aa11.18□□□□□ -0.62
CACNB3-209ENST00000548860 C16orf54Q6UWD8 224 aa11.18□□□□□ -0.62
CACNB3-209ENST00000548860 SHANK2-AS3Q9BTD1 123 aa11.18□□□□□ -0.62
CACNB3-209ENST00000548860 TGFAP01135 160 aa11.18□□□□□ -0.62
CACNB3-209ENST00000548860 C12orf54Q6X4T0 127 aa11.18□□□□□ -0.62
CACNB3-209ENST00000548860 MAP1LC3AQ9H492 121 aa11.18□□□□□ -0.62
CACNB3-209ENST00000548860 FNDC10F2Z333 226 aa11.18□□□□□ -0.62
CACNB3-209ENST00000548860 BMI1P35226 326 aa11.18□□□□□ -0.62
CACNB3-209ENST00000548860 METTL26Q96S19 204 aa11.18□□□□□ -0.62
CACNB3-209ENST00000548860 JKAMPQ9P055 326 aa11.17□□□□□ -0.62
CACNB3-209ENST00000548860 TRAV40A0A0B4J280 105 aa11.17□□□□□ -0.62
CACNB3-209ENST00000548860 A1L4Q6 167 aa11.17□□□□□ -0.62
CACNB3-209ENST00000548860 K7EIM0 57 aa11.17□□□□□ -0.62
CACNB3-209ENST00000548860 CEACAM4O75871 244 aa11.17□□□□□ -0.62
CACNB3-209ENST00000548860 DNLZQ5SXM8 178 aa11.17□□□□□ -0.62
CACNB3-209ENST00000548860 MRPL27Q9P0M9 148 aaKnown RBP11.17□□□□□ -0.62
CACNB3-209ENST00000548860 EPG5Q9HCE0 2579 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms