RNA–Protein interactions for RNA: ENST00000548171.1

GATC-202, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-202ENST00000548171 PRAC2D3DTV9 90 aa13.73□□□□□ -0.21
GATC-202ENST00000548171 SLC38A11Q08AI6 406 aa13.73□□□□□ -0.21
GATC-202ENST00000548171 TMEM14EPQ6UXP3 125 aa13.73□□□□□ -0.21
GATC-202ENST00000548171 ZNF680Q8NEM1 530 aa13.73□□□□□ -0.21
GATC-202ENST00000548171 MCFD2Q8NI22 146 aa13.73□□□□□ -0.21
GATC-202ENST00000548171 FRZBQ92765 325 aa13.73□□□□□ -0.21
GATC-202ENST00000548171 SLIRPQ9GZT3 109 aaKnown RBP13.73□□□□□ -0.21
GATC-202ENST00000548171 TRAV12-3A0A0B4J271 114 aa13.72□□□□□ -0.21
GATC-202ENST00000548171 SSSCA1O60232 199 aa13.72□□□□□ -0.21
GATC-202ENST00000548171 TMBIM6P55061 237 aa13.72□□□□□ -0.21
GATC-202ENST00000548171 XGP55808 180 aa13.72□□□□□ -0.21
GATC-202ENST00000548171 Q5VSD8 79 aa13.72□□□□□ -0.21
GATC-202ENST00000548171 NPIPB6E9PJ23 425 aa13.71□□□□□ -0.21
GATC-202ENST00000548171 SLC17A3O00476 420 aa13.71□□□□□ -0.21
GATC-202ENST00000548171 CCNKO75909 580 aa13.71□□□□□ -0.21
GATC-202ENST00000548171 METTL15P1P0C7V9 234 aa13.71□□□□□ -0.21
GATC-202ENST00000548171 NFE4Q86UQ8 179 aa13.71□□□□□ -0.21
GATC-202ENST00000548171 ZNF431Q8TF32 576 aaPredicted RBP13.71□□□□□ -0.21
GATC-202ENST00000548171 J3KRW8 73 aa13.7□□□□□ -0.22
GATC-202ENST00000548171 COX7A2P2O60397 106 aa13.7□□□□□ -0.22
GATC-202ENST00000548171 IFNA5P01569 189 aa13.7□□□□□ -0.22
GATC-202ENST00000548171 SNRPCP09234 159 aaKnown RBP13.7□□□□□ -0.22
GATC-202ENST00000548171 CT45A10P0DMU9 189 aa13.7□□□□□ -0.22
GATC-202ENST00000548171 IGLC2P0DOY2 106 aa13.7□□□□□ -0.22
GATC-202ENST00000548171 GUK1Q16774 197 aa13.7□□□□□ -0.22
GATC-202ENST00000548171 PYDC2Q56P42 97 aa13.7□□□□□ -0.22
GATC-202ENST00000548171 ZBTB8BQ8NAP8 495 aaPredicted RBP13.7□□□□□ -0.22
GATC-202ENST00000548171 LINC00854A0A1B0GVQ3 168 aa13.69□□□□□ -0.22
GATC-202ENST00000548171 AGPAT2O15120 278 aa13.69□□□□□ -0.22
GATC-202ENST00000548171 TSC22D2O75157 780 aa13.69□□□□□ -0.22
GATC-202ENST00000548171 NXPH4O95158 308 aa13.69□□□□□ -0.22
GATC-202ENST00000548171 SLC25A5P05141 298 aaKnown RBP13.69□□□□□ -0.22
GATC-202ENST00000548171 C10orf113Q5VZT2 155 aa13.69□□□□□ -0.22
GATC-202ENST00000548171 C11orf72Q8NBR9 251 aa13.69□□□□□ -0.22
GATC-202ENST00000548171 TMEM37Q8WXS4 190 aa13.69□□□□□ -0.22
GATC-202ENST00000548171 SAT2Q96F10 170 aaPredicted RBP13.69□□□□□ -0.22
GATC-202ENST00000548171 GGACTQ9BVM4 153 aa13.69□□□□□ -0.22
GATC-202ENST00000548171 GSN-AS1Q9NRJ2 163 aa13.69□□□□□ -0.22
GATC-202ENST00000548171 ICOSQ9Y6W8 199 aa13.69□□□□□ -0.22
GATC-202ENST00000548171 C9orf170A2RU37 121 aa13.68□□□□□ -0.22
GATC-202ENST00000548171 H3BTX0 84 aa13.68□□□□□ -0.22
GATC-202ENST00000548171 ZNF324O75467 553 aaPredicted RBP13.68□□□□□ -0.22
GATC-202ENST00000548171 TAS2R30P59541 319 aa13.68□□□□□ -0.22
GATC-202ENST00000548171 LINC00467Q9BRT7 94 aa13.68□□□□□ -0.22
GATC-202ENST00000548171 FUT9Q9Y231 359 aa13.68□□□□□ -0.22
GATC-202ENST00000548171 TRGV1A0A0A0MS02 117 aa13.67□□□□□ -0.22
GATC-202ENST00000548171 H3BQ15 152 aa13.67□□□□□ -0.22
GATC-202ENST00000548171 OPCMLQ14982 345 aa13.67□□□□□ -0.22
GATC-202ENST00000548171 FLG2Q5D862 2391 aaPredicted RBP13.67□□□□□ -0.22
GATC-202ENST00000548171 TRAV9-2A0A087WT02 112 aa13.66□□□□□ -0.22
GATC-202ENST00000548171 C7orf71A4D174 169 aa13.66□□□□□ -0.22
GATC-202ENST00000548171 PAX4O43316 350 aa13.66□□□□□ -0.22
GATC-202ENST00000548171 ZNF253O75346 499 aa13.66□□□□□ -0.22
GATC-202ENST00000548171 FUSP35637 526 aaKnown RBP eCLIP13.66□□□□□ -0.22
GATC-202ENST00000548171 ANXA2RQ3ZCQ2 193 aa13.66□□□□□ -0.22
GATC-202ENST00000548171 MORN5Q5VZ52 161 aa13.66□□□□□ -0.22
GATC-202ENST00000548171 A0A087WTM6 91 aa13.65□□□□□ -0.22
GATC-202ENST00000548171 K7EP13 123 aa13.65□□□□□ -0.22
GATC-202ENST00000548171 NOL3O60936 208 aaKnown RBP13.65□□□□□ -0.22
GATC-202ENST00000548171 EIF4E3Q8N5X7 224 aaKnown RBP13.65□□□□□ -0.22
GATC-202ENST00000548171 MRPL53Q96EL3 112 aaKnown RBP13.65□□□□□ -0.22
GATC-202ENST00000548171 ST6GAL2Q96JF0 529 aa13.65□□□□□ -0.22
GATC-202ENST00000548171 MGST2Q99735 147 aa13.65□□□□□ -0.22
GATC-202ENST00000548171 DNAJC4Q9NNZ3 241 aa13.65□□□□□ -0.22
GATC-202ENST00000548171 V9GYH0 126 aa13.65□□□□□ -0.22
GATC-202ENST00000548171 KLLNB2CW77 178 aa13.64□□□□□ -0.23
GATC-202ENST00000548171 SPINK4O60575 86 aa13.64□□□□□ -0.23
GATC-202ENST00000548171 OR4E1P0C645 316 aa13.64□□□□□ -0.23
GATC-202ENST00000548171 TCL1AP56279 114 aa13.64□□□□□ -0.23
GATC-202ENST00000548171 KRTAP10-1P60331 282 aa13.64□□□□□ -0.23
GATC-202ENST00000548171 SLAQ13239 276 aa13.64□□□□□ -0.23
GATC-202ENST00000548171 RAB31Q13636 194 aa13.64□□□□□ -0.23
GATC-202ENST00000548171 ICAM4Q14773 271 aa13.64□□□□□ -0.23
GATC-202ENST00000548171 Q6ZRG5 221 aa13.64□□□□□ -0.23
GATC-202ENST00000548171 PRO0255Q9UI72 69 aa13.64□□□□□ -0.23
GATC-202ENST00000548171 H3BMQ9 156 aa13.63□□□□□ -0.23
GATC-202ENST00000548171 SCGB1D2O95969 90 aa13.63□□□□□ -0.23
GATC-202ENST00000548171 MRPL23Q16540 153 aaKnown RBP13.63□□□□□ -0.23
GATC-202ENST00000548171 IBA57Q5T440 356 aaKnown RBP13.63□□□□□ -0.23
GATC-202ENST00000548171 LYPD5Q6UWN5 251 aa13.63□□□□□ -0.23
GATC-202ENST00000548171 TNFRSF18Q9Y5U5 241 aa13.63□□□□□ -0.23
GATC-202ENST00000548171 MPDU1O75352 247 aa13.62□□□□□ -0.23
GATC-202ENST00000548171 DNAH10OSP0CZ25 163 aa13.62□□□□□ -0.23
GATC-202ENST00000548171 CAMLGP49069 296 aa13.62□□□□□ -0.23
GATC-202ENST00000548171 ARL16Q0P5N6 197 aa13.62□□□□□ -0.23
GATC-202ENST00000548171 IAH1Q2TAA2 248 aaPredicted RBP13.62□□□□□ -0.23
GATC-202ENST00000548171 OR1L4Q8NGR5 311 aa13.62□□□□□ -0.23
GATC-202ENST00000548171 LINC00477Q96M19 166 aa13.62□□□□□ -0.23
GATC-202ENST00000548171 PFDN5Q99471 154 aa13.62□□□□□ -0.23
GATC-202ENST00000548171 RCL1Q9Y2P8 373 aaKnown RBP13.62□□□□□ -0.23
GATC-202ENST00000548171 KLF12Q9Y4X4 402 aa13.62□□□□□ -0.23
GATC-202ENST00000548171 LY96Q9Y6Y9 160 aa13.62□□□□□ -0.23
GATC-202ENST00000548171 NDUFB6O95139 128 aa13.61□□□□□ -0.23
GATC-202ENST00000548171 GCSHP23434 173 aa13.61□□□□□ -0.23
GATC-202ENST00000548171 NEGR1Q7Z3B1 354 aa13.61□□□□□ -0.23
GATC-202ENST00000548171 FAM19A4Q96LR4 140 aa13.61□□□□□ -0.23
GATC-202ENST00000548171 C7orf66A4D0T2 115 aa13.6□□□□□ -0.23
GATC-202ENST00000548171 NMBP08949 121 aa13.6□□□□□ -0.23
GATC-202ENST00000548171 S100A5P33763 92 aa13.6□□□□□ -0.23
GATC-202ENST00000548171 CRYBA4P53673 196 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms