RNA–Protein interactions for RNA: ENST00000547204.5

ARFGAP1-220, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2 BASIC

Gene ARFGAP1, Length 1,327 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-220ENST00000547204 TCRAP04437 139 aa12.71□□□□□ -0.37
ARFGAP1-220ENST00000547204 CSN1S1P47710 185 aa12.71□□□□□ -0.37
ARFGAP1-220ENST00000547204 DEFB114Q30KQ6 69 aa12.71□□□□□ -0.37
ARFGAP1-220ENST00000547204 C10orf91Q5T1B1 145 aa12.71□□□□□ -0.37
ARFGAP1-220ENST00000547204 IGFL4Q6B9Z1 124 aa12.71□□□□□ -0.37
ARFGAP1-220ENST00000547204 ARL6IP6Q8N6S5 226 aa12.71□□□□□ -0.37
ARFGAP1-220ENST00000547204 C2CD4CQ8TF44 421 aa12.71□□□□□ -0.37
ARFGAP1-220ENST00000547204 MRPL53Q96EL3 112 aaKnown RBP12.71□□□□□ -0.37
ARFGAP1-220ENST00000547204 MS4A6AQ9H2W1 248 aa12.71□□□□□ -0.37
ARFGAP1-220ENST00000547204 PARLQ9H300 379 aa12.71□□□□□ -0.37
ARFGAP1-220ENST00000547204 RPH3ALQ9UNE2 315 aa12.71□□□□□ -0.37
ARFGAP1-220ENST00000547204 M0R3E3 92 aa12.7□□□□□ -0.38
ARFGAP1-220ENST00000547204 ISLRO14498 428 aa12.7□□□□□ -0.38
ARFGAP1-220ENST00000547204 HLA-DMBP28068 263 aa12.7□□□□□ -0.38
ARFGAP1-220ENST00000547204 AKR1C3P42330 323 aa12.7□□□□□ -0.38
ARFGAP1-220ENST00000547204 ZNF674Q2M3X9 581 aa12.7□□□□□ -0.38
ARFGAP1-220ENST00000547204 FAM74A3Q4VXF1 159 aa12.7□□□□□ -0.38
ARFGAP1-220ENST00000547204 RBPMS2Q6ZRY4 209 aaKnown RBP12.7□□□□□ -0.38
ARFGAP1-220ENST00000547204 GBGT1Q8N5D6 347 aa12.7□□□□□ -0.38
ARFGAP1-220ENST00000547204 RNF182Q8N6D2 247 aa12.7□□□□□ -0.38
ARFGAP1-220ENST00000547204 DCANP1Q8TF63 244 aa12.7□□□□□ -0.38
ARFGAP1-220ENST00000547204 SMIM7Q9BQ49 75 aa12.7□□□□□ -0.38
ARFGAP1-220ENST00000547204 DERL1Q9BUN8 251 aa12.7□□□□□ -0.38
ARFGAP1-220ENST00000547204 CARHSP1Q9Y2V2 147 aaKnown RBP12.7□□□□□ -0.38
ARFGAP1-220ENST00000547204 ZNF727A8MUV8 499 aa12.69□□□□□ -0.38
ARFGAP1-220ENST00000547204 DIRC3C9JPN6 131 aa12.69□□□□□ -0.38
ARFGAP1-220ENST00000547204 DNASE2O00115 360 aaPredicted RBP12.69□□□□□ -0.38
ARFGAP1-220ENST00000547204 SAP30O75446 220 aa12.69□□□□□ -0.38
ARFGAP1-220ENST00000547204 ID1P41134 155 aa12.69□□□□□ -0.38
ARFGAP1-220ENST00000547204 CNN1P51911 297 aaKnown RBP12.69□□□□□ -0.38
ARFGAP1-220ENST00000547204 PAFAH1B2P68402 229 aa12.69□□□□□ -0.38
ARFGAP1-220ENST00000547204 DEFA6Q01524 100 aa12.69□□□□□ -0.38
ARFGAP1-220ENST00000547204 TMEM61Q8N0U2 210 aa12.69□□□□□ -0.38
ARFGAP1-220ENST00000547204 TRAV2A0A0B4J234 112 aa12.68□□□□□ -0.38
ARFGAP1-220ENST00000547204 TRAV25A0A0B4J276 109 aa12.68□□□□□ -0.38
ARFGAP1-220ENST00000547204 SERTM2A0A1B0GWG4 89 aa12.68□□□□□ -0.38
ARFGAP1-220ENST00000547204 K7EQG2 157 aa12.68□□□□□ -0.38
ARFGAP1-220ENST00000547204 TSPAN4O14817 238 aa12.68□□□□□ -0.38
ARFGAP1-220ENST00000547204 RPL35P42766 123 aaKnown RBP12.68□□□□□ -0.38
ARFGAP1-220ENST00000547204 TFPI2P48307 235 aa12.68□□□□□ -0.38
ARFGAP1-220ENST00000547204 PSG3Q16557 428 aa12.68□□□□□ -0.38
ARFGAP1-220ENST00000547204 CD300EQ496F6 205 aaPredicted RBP12.68□□□□□ -0.38
ARFGAP1-220ENST00000547204 LCN12Q6JVE5 192 aa12.68□□□□□ -0.38
ARFGAP1-220ENST00000547204 GOLT1AQ6ZVE7 132 aa12.68□□□□□ -0.38
ARFGAP1-220ENST00000547204 WFDC3Q8IUB2 231 aa12.68□□□□□ -0.38
ARFGAP1-220ENST00000547204 NOTCH1P46531 2555 aa12.67□□□□□ -0.38
ARFGAP1-220ENST00000547204 K7EQM0 130 aa12.67□□□□□ -0.38
ARFGAP1-220ENST00000547204 C20orf173Q96LM9 149 aa12.67□□□□□ -0.38
ARFGAP1-220ENST00000547204 NIPSNAP3BQ9BS92 247 aa12.67□□□□□ -0.38
ARFGAP1-220ENST00000547204 ZNF705FA8MVS1 300 aaPredicted RBP12.66□□□□□ -0.38
ARFGAP1-220ENST00000547204 APOC3P02656 99 aa12.66□□□□□ -0.38
ARFGAP1-220ENST00000547204 S100A9P06702 114 aaKnown RBP12.66□□□□□ -0.38
ARFGAP1-220ENST00000547204 TAS2R60P59551 318 aa12.66□□□□□ -0.38
ARFGAP1-220ENST00000547204 UBE2G1P62253 170 aa12.66□□□□□ -0.38
ARFGAP1-220ENST00000547204 TMEM183BQ1AE95 376 aa12.66□□□□□ -0.38
ARFGAP1-220ENST00000547204 ZNF738Q8NE65 137 aa12.66□□□□□ -0.38
ARFGAP1-220ENST00000547204 FMC1Q96HJ9 113 aa12.66□□□□□ -0.38
ARFGAP1-220ENST00000547204 LINC00479Q96M42 142 aa12.66□□□□□ -0.38
ARFGAP1-220ENST00000547204 SPAG8Q99932 426 aaPredicted RBP12.66□□□□□ -0.38
ARFGAP1-220ENST00000547204 KLF12Q9Y4X4 402 aa12.66□□□□□ -0.38
ARFGAP1-220ENST00000547204 WNK1Q9H4A3 2382 aa12.66□□□□□ -0.38
ARFGAP1-220ENST00000547204 TRAV34A0A0B4J273 112 aa12.65□□□□□ -0.38
ARFGAP1-220ENST00000547204 C9JCJ5 164 aa12.65□□□□□ -0.38
ARFGAP1-220ENST00000547204 IGLV1-51P01701 117 aa12.65□□□□□ -0.38
ARFGAP1-220ENST00000547204 SNRPD3P62318 126 aaKnown RBP12.65□□□□□ -0.38
ARFGAP1-220ENST00000547204 TMEM75Q8N9X5 138 aa12.65□□□□□ -0.38
ARFGAP1-220ENST00000547204 OR2K2Q8NGT1 345 aa12.65□□□□□ -0.38
ARFGAP1-220ENST00000547204 NAT8Q9UHE5 227 aa12.65□□□□□ -0.38
ARFGAP1-220ENST00000547204 IGKV2-40A0A087WW87 121 aaPredicted RBP12.64□□□□□ -0.39
ARFGAP1-220ENST00000547204 OR4C46A6NHA9 309 aa12.64□□□□□ -0.39
ARFGAP1-220ENST00000547204 PRAC2D3DTV9 90 aa12.64□□□□□ -0.39
ARFGAP1-220ENST00000547204 IGKV2D-40P01614 121 aaPredicted RBP12.64□□□□□ -0.39
ARFGAP1-220ENST00000547204 GNG4P50150 75 aa12.64□□□□□ -0.39
ARFGAP1-220ENST00000547204 GUCA2BQ16661 112 aa12.64□□□□□ -0.39
ARFGAP1-220ENST00000547204 TMEM241Q24JQ0 296 aa12.64□□□□□ -0.39
ARFGAP1-220ENST00000547204 CENPWQ5EE01 88 aa12.64□□□□□ -0.39
ARFGAP1-220ENST00000547204 FAM24BQ8N5W8 94 aa12.64□□□□□ -0.39
ARFGAP1-220ENST00000547204 IGF2BP2-AS1Q96M15 143 aa12.64□□□□□ -0.39
ARFGAP1-220ENST00000547204 TRBV20OR9-2A0A075B6H5 130 aa12.63□□□□□ -0.39
ARFGAP1-220ENST00000547204 TRBV6-1A0A0K0K1D8 114 aa12.63□□□□□ -0.39
ARFGAP1-220ENST00000547204 RBAKDNA6NC62 111 aa12.63□□□□□ -0.39
ARFGAP1-220ENST00000547204 FBLL1A6NHQ2 334 aaKnown RBP12.63□□□□□ -0.39
ARFGAP1-220ENST00000547204 ZNF688P0C7X2 276 aa12.63□□□□□ -0.39
ARFGAP1-220ENST00000547204 PRB4P10163 310 aaPredicted RBP12.63□□□□□ -0.39
ARFGAP1-220ENST00000547204 Q86TA4 180 aa12.63□□□□□ -0.39
ARFGAP1-220ENST00000547204 SVBPQ8N300 66 aa12.63□□□□□ -0.39
ARFGAP1-220ENST00000547204 TVP23CQ96ET8 276 aa12.63□□□□□ -0.39
ARFGAP1-220ENST00000547204 SDF2L1Q9HCN8 221 aa12.63□□□□□ -0.39
ARFGAP1-220ENST00000547204 TRAV8-1A0A0A6YYK1 113 aa12.62□□□□□ -0.39
ARFGAP1-220ENST00000547204 IZUMO1RA6ND01 250 aa12.62□□□□□ -0.39
ARFGAP1-220ENST00000547204 IGLV2-11P01706 119 aa12.62□□□□□ -0.39
ARFGAP1-220ENST00000547204 CD33P20138 364 aa12.62□□□□□ -0.39
ARFGAP1-220ENST00000547204 INSL3P51460 131 aa12.62□□□□□ -0.39
ARFGAP1-220ENST00000547204 FLI1Q01543 452 aaPredicted RBP12.62□□□□□ -0.39
ARFGAP1-220ENST00000547204 PNRC1Q12796 327 aaPredicted RBP12.62□□□□□ -0.39
ARFGAP1-220ENST00000547204 PSMG4Q5JS54 123 aa12.62□□□□□ -0.39
ARFGAP1-220ENST00000547204 C9orf66Q5T8R8 295 aa12.62□□□□□ -0.39
ARFGAP1-220ENST00000547204 SGK494Q96LW2 274 aa12.62□□□□□ -0.39
ARFGAP1-220ENST00000547204 MCRIP2Q9BUT9 160 aaKnown RBP12.62□□□□□ -0.39
ARFGAP1-220ENST00000547204 LY96Q9Y6Y9 160 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms