RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 TRAV8-3A0A0A6YYJ7 113 aa10.35□□□□□ -0.75
PTCH1-212ENST00000546744 C5orf63A6NC05 138 aa10.35□□□□□ -0.75
PTCH1-212ENST00000546744 UNQ6494/PRO21346Q6UXR6 183 aa10.35□□□□□ -0.75
PTCH1-212ENST00000546744 ZNF318Q5VUA4 2279 aa10.35□□□□□ -0.75
PTCH1-212ENST00000546744 PAX8Q06710 450 aa10.35□□□□□ -0.75
PTCH1-212ENST00000546744 LYPD6Q86Y78 171 aa10.35□□□□□ -0.75
PTCH1-212ENST00000546744 CD177Q8N6Q3 437 aa10.35□□□□□ -0.75
PTCH1-212ENST00000546744 THAP8Q8NA92 274 aa10.35□□□□□ -0.75
PTCH1-212ENST00000546744 A0A087WX48 190 aa10.34□□□□□ -0.75
PTCH1-212ENST00000546744 WIPF3A6NGB9 483 aa10.34□□□□□ -0.75
PTCH1-212ENST00000546744 CFHR1Q03591 330 aa10.34□□□□□ -0.75
PTCH1-212ENST00000546744 DTX1Q86Y01 620 aa10.34□□□□□ -0.75
PTCH1-212ENST00000546744 ANKRD29Q8N6D5 301 aa10.34□□□□□ -0.75
PTCH1-212ENST00000546744 CEP250Q9BV73 2442 aa10.34□□□□□ -0.75
PTCH1-212ENST00000546744 RANBP2P49792 3224 aaKnown RBP10.34□□□□□ -0.75
PTCH1-212ENST00000546744 BDP1A6H8Y1 2624 aa10.34□□□□□ -0.75
PTCH1-212ENST00000546744 IGHV3OR16-13A0A075B7E8 117 aa10.34□□□□□ -0.75
PTCH1-212ENST00000546744 TRBV7-1A0A0A6YYK4 115 aa10.34□□□□□ -0.75
PTCH1-212ENST00000546744 IGHV3-74A0A0B4J1X5 117 aa10.34□□□□□ -0.75
PTCH1-212ENST00000546744 B5MCH6 92 aa10.34□□□□□ -0.75
PTCH1-212ENST00000546744 SRD5A1P18405 259 aa10.34□□□□□ -0.75
PTCH1-212ENST00000546744 CFHR2P36980 270 aa10.34□□□□□ -0.75
PTCH1-212ENST00000546744 C10orf55Q5SWW7 151 aa10.34□□□□□ -0.75
PTCH1-212ENST00000546744 PRADC1Q9BSG0 188 aa10.34□□□□□ -0.75
PTCH1-212ENST00000546744 ZNF106Q9H2Y7 1883 aaKnown RBP10.34□□□□□ -0.75
PTCH1-212ENST00000546744 FGF6P10767 208 aa10.34□□□□□ -0.75
PTCH1-212ENST00000546744 FAM201AQ5SY85 155 aa10.34□□□□□ -0.75
PTCH1-212ENST00000546744 GLMPQ8WWB7 406 aa10.34□□□□□ -0.75
PTCH1-212ENST00000546744 MDC1Q14676 2089 aaKnown RBP10.33□□□□□ -0.76
PTCH1-212ENST00000546744 PI4KAP42356 2102 aa10.33□□□□□ -0.76
PTCH1-212ENST00000546744 PHLDA1Q8WV24 401 aaPredicted RBP10.33□□□□□ -0.76
PTCH1-212ENST00000546744 MCRIP2Q9BUT9 160 aaKnown RBP10.33□□□□□ -0.76
PTCH1-212ENST00000546744 CACNA1EQ15878 2313 aa10.33□□□□□ -0.76
PTCH1-212ENST00000546744 INTS1Q8N201 2190 aaKnown RBP10.33□□□□□ -0.76
PTCH1-212ENST00000546744 NDUFS7O75251 213 aa10.33□□□□□ -0.76
PTCH1-212ENST00000546744 IGHV1-8P0DP01 117 aa10.33□□□□□ -0.76
PTCH1-212ENST00000546744 TRPT1Q86TN4 253 aaKnown RBP10.33□□□□□ -0.76
PTCH1-212ENST00000546744 SMIM2Q9BVW6 85 aa10.33□□□□□ -0.76
PTCH1-212ENST00000546744 SELENOKQ9Y6D0 94 aa10.33□□□□□ -0.76
PTCH1-212ENST00000546744 IGHV1-18A0A0C4DH31 117 aa10.33□□□□□ -0.76
PTCH1-212ENST00000546744 IGLL5B9A064 214 aa10.33□□□□□ -0.76
PTCH1-212ENST00000546744 CCL21O00585 134 aa10.33□□□□□ -0.76
PTCH1-212ENST00000546744 IGHV1-46P01743 117 aa10.33□□□□□ -0.76
PTCH1-212ENST00000546744 LSM4Q9Y4Z0 139 aaKnown RBP10.33□□□□□ -0.76
PTCH1-212ENST00000546744 LTAP01374 205 aa10.33□□□□□ -0.76
PTCH1-212ENST00000546744 ATP5G1P05496 136 aa10.33□□□□□ -0.76
PTCH1-212ENST00000546744 IL17RELQ6ZVW7 336 aa10.33□□□□□ -0.76
PTCH1-212ENST00000546744 MRPL35Q9NZE8 188 aaKnown RBP10.33□□□□□ -0.76
PTCH1-212ENST00000546744 THADAQ6YHU6 1953 aa10.32□□□□□ -0.76
PTCH1-212ENST00000546744 IGHV1-69DA0A0B4J2H0 117 aa10.32□□□□□ -0.76
PTCH1-212ENST00000546744 IGHV1-3A0A0C4DH29 117 aa10.32□□□□□ -0.76
PTCH1-212ENST00000546744 K7EN84 100 aa10.32□□□□□ -0.76
PTCH1-212ENST00000546744 ZFP36L1Q07352 338 aaKnown RBP10.32□□□□□ -0.76
PTCH1-212ENST00000546744 ZNF876PQ49A33 203 aa10.32□□□□□ -0.76
PTCH1-212ENST00000546744 C8orf86Q6ZUL3 223 aa10.32□□□□□ -0.76
PTCH1-212ENST00000546744 C15orf53Q8NAA6 179 aa10.32□□□□□ -0.76
PTCH1-212ENST00000546744 PIMREGQ9BSJ6 248 aa10.32□□□□□ -0.76
PTCH1-212ENST00000546744 LAMA2P24043 3122 aaKnown RBP10.32□□□□□ -0.76
PTCH1-212ENST00000546744 TIMM23O14925 209 aa10.32□□□□□ -0.76
PTCH1-212ENST00000546744 SPATA12Q7Z6I5 190 aa10.32□□□□□ -0.76
PTCH1-212ENST00000546744 GPR179Q6PRD1 2367 aa10.32□□□□□ -0.76
PTCH1-212ENST00000546744 VWC2LB2RUY7 222 aa10.31□□□□□ -0.76
PTCH1-212ENST00000546744 NTN3O00634 580 aaPredicted RBP10.31□□□□□ -0.76
PTCH1-212ENST00000546744 SSC4DQ8WTU2 575 aa10.31□□□□□ -0.76
PTCH1-212ENST00000546744 ZNF581Q9P0T4 197 aa10.31□□□□□ -0.76
PTCH1-212ENST00000546744 RHODO00212 210 aa10.31□□□□□ -0.76
PTCH1-212ENST00000546744 CMC4P56277 68 aaPredicted RBP10.31□□□□□ -0.76
PTCH1-212ENST00000546744 C5orf64Q2M2E5 130 aa10.31□□□□□ -0.76
PTCH1-212ENST00000546744 UBL5Q9BZL1 73 aa10.31□□□□□ -0.76
PTCH1-212ENST00000546744 PEMTQ9UBM1 199 aa10.31□□□□□ -0.76
PTCH1-212ENST00000546744 IGHV3-49A0A0A0MS15 119 aa10.31□□□□□ -0.76
PTCH1-212ENST00000546744 CRYBA4P53673 196 aa10.31□□□□□ -0.76
PTCH1-212ENST00000546744 ANKRD39Q53RE8 183 aa10.31□□□□□ -0.76
PTCH1-212ENST00000546744 LINC00311Q8N616 119 aa10.31□□□□□ -0.76
PTCH1-212ENST00000546744 TMEM213A2RRL7 107 aa10.3□□□□□ -0.76
PTCH1-212ENST00000546744 C9orf106Q8NAJ2 232 aa10.3□□□□□ -0.76
PTCH1-212ENST00000546744 PRR25Q96S07 402 aa10.3□□□□□ -0.76
PTCH1-212ENST00000546744 PLA2G2EQ9NZK7 142 aa10.3□□□□□ -0.76
PTCH1-212ENST00000546744 SHANK1Q9Y566 2161 aa10.3□□□□□ -0.76
PTCH1-212ENST00000546744 KIAA1549LQ6ZVL6 1849 aa10.3□□□□□ -0.76
PTCH1-212ENST00000546744 TRBV25-1A0A075B6N4 114 aa10.3□□□□□ -0.76
PTCH1-212ENST00000546744 J3KT08 172 aa10.3□□□□□ -0.76
PTCH1-212ENST00000546744 ZNF474Q6S9Z5 364 aaPredicted RBP10.3□□□□□ -0.76
PTCH1-212ENST00000546744 S4R3C0 116 aa10.3□□□□□ -0.76
PTCH1-212ENST00000546744 ADARB2-AS1A8MUL3 147 aa10.3□□□□□ -0.76
PTCH1-212ENST00000546744 SMKR1H3BMG3 65 aa10.3□□□□□ -0.76
PTCH1-212ENST00000546744 IGHV3-23P01764 117 aa10.3□□□□□ -0.76
PTCH1-212ENST00000546744 FXYD5Q96DB9 178 aa10.3□□□□□ -0.76
PTCH1-212ENST00000546744 IGHV3-66A0A0C4DH42 116 aa10.3□□□□□ -0.76
PTCH1-212ENST00000546744 LINC00158P58513 81 aa10.3□□□□□ -0.76
PTCH1-212ENST00000546744 B3GALT5-AS1P59052 145 aa10.3□□□□□ -0.76
PTCH1-212ENST00000546744 RPL36AP83881 106 aaKnown RBP10.3□□□□□ -0.76
PTCH1-212ENST00000546744 ZNF493Q6ZR52 646 aa10.3□□□□□ -0.76
PTCH1-212ENST00000546744 Q6ZVH6 145 aa10.3□□□□□ -0.76
PTCH1-212ENST00000546744 RPL36ALQ969Q0 106 aaKnown RBP10.3□□□□□ -0.76
PTCH1-212ENST00000546744 PHF3Q92576 2039 aaKnown RBP10.3□□□□□ -0.76
PTCH1-212ENST00000546744 IGKV1D-17A0A075B6S4 117 aa10.29□□□□□ -0.76
PTCH1-212ENST00000546744 A0A1W2PPI3 338 aa10.29□□□□□ -0.76
PTCH1-212ENST00000546744 ATOX1O00244 68 aa10.29□□□□□ -0.76
PTCH1-212ENST00000546744 CFC1BP0CG36 223 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 134.8 ms