RNA–Protein interactions for RNA: ENST00000546588.1

VPS29-203, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-203ENST00000546588 DNAJC9-AS1A6NH13 148 aa6.5□□□□□ -1.37
VPS29-203ENST00000546588 PPP5D1E7EU14 171 aa6.5□□□□□ -1.37
VPS29-203ENST00000546588 PAGE4O60829 102 aa6.5□□□□□ -1.37
VPS29-203ENST00000546588 NDUFB8O95169 186 aa6.5□□□□□ -1.37
VPS29-203ENST00000546588 CTSGP08311 255 aa6.5□□□□□ -1.37
VPS29-203ENST00000546588 APELAP0DMC3 54 aa6.5□□□□□ -1.37
VPS29-203ENST00000546588 PMCHP20382 165 aa6.5□□□□□ -1.37
VPS29-203ENST00000546588 PSMB3P49720 205 aa6.5□□□□□ -1.37
VPS29-203ENST00000546588 RHOBP62745 196 aa6.5□□□□□ -1.37
VPS29-203ENST00000546588 MRPL23Q16540 153 aaKnown RBP6.5□□□□□ -1.37
VPS29-203ENST00000546588 ECSCRQ19T08 205 aa6.5□□□□□ -1.37
VPS29-203ENST00000546588 OCIAD2Q56VL3 154 aa6.5□□□□□ -1.37
VPS29-203ENST00000546588 C6orf226Q5I0X4 101 aa6.5□□□□□ -1.37
VPS29-203ENST00000546588 SERTAD4-AS1Q5TG53 156 aa6.5□□□□□ -1.37
VPS29-203ENST00000546588 OR1L4Q8NGR5 311 aa6.5□□□□□ -1.37
VPS29-203ENST00000546588 TMEM37Q8WXS4 190 aa6.5□□□□□ -1.37
VPS29-203ENST00000546588 ACTR3CQ9C0K3 210 aaPredicted RBP6.5□□□□□ -1.37
VPS29-203ENST00000546588 C16orf95Q9H693 158 aa6.5□□□□□ -1.37
VPS29-203ENST00000546588 ESM1Q9NQ30 184 aa6.5□□□□□ -1.37
VPS29-203ENST00000546588 TNFRSF19Q9NS68 423 aa6.5□□□□□ -1.37
VPS29-203ENST00000546588 TECRQ9NZ01 308 aaKnown RBP6.5□□□□□ -1.37
VPS29-203ENST00000546588 MRPL27Q9P0M9 148 aaKnown RBP6.5□□□□□ -1.37
VPS29-203ENST00000546588 MAP1LC3B2A6NCE7 125 aa6.49□□□□□ -1.37
VPS29-203ENST00000546588 ZFP92A6NM28 416 aa6.49□□□□□ -1.37
VPS29-203ENST00000546588 LY6G6DO95868 133 aa6.49□□□□□ -1.37
VPS29-203ENST00000546588 PRH1P02810 166 aa6.49□□□□□ -1.37
VPS29-203ENST00000546588 RHOGP84095 191 aa6.49□□□□□ -1.37
VPS29-203ENST00000546588 ZNF90Q03938 601 aa6.49□□□□□ -1.37
VPS29-203ENST00000546588 FOXE3Q13461 319 aa6.49□□□□□ -1.37
VPS29-203ENST00000546588 C15orf32Q32M92 178 aa6.49□□□□□ -1.37
VPS29-203ENST00000546588 ZNF506Q5JVG8 444 aa6.49□□□□□ -1.37
VPS29-203ENST00000546588 C10orf91Q5T1B1 145 aa6.49□□□□□ -1.37
VPS29-203ENST00000546588 ZNF343Q6P1L6 599 aa6.49□□□□□ -1.37
VPS29-203ENST00000546588 PATE2Q6UY27 113 aa6.49□□□□□ -1.37
VPS29-203ENST00000546588 PQLC2Q6ZP29 291 aa6.49□□□□□ -1.37
VPS29-203ENST00000546588 ZNF491Q8N8L2 437 aa6.49□□□□□ -1.37
VPS29-203ENST00000546588 FAM213BQ8TBF2 198 aa6.49□□□□□ -1.37
VPS29-203ENST00000546588 PCNPQ8WW12 178 aaKnown RBP6.49□□□□□ -1.37
VPS29-203ENST00000546588 EEF1AKMT3Q96AZ1 226 aa6.49□□□□□ -1.37
VPS29-203ENST00000546588 ACY3Q96HD9 319 aa6.49□□□□□ -1.37
VPS29-203ENST00000546588 TXNDC17Q9BRA2 123 aa6.49□□□□□ -1.37
VPS29-203ENST00000546588 MAP1LC3BQ9GZQ8 125 aa6.49□□□□□ -1.37
VPS29-203ENST00000546588 FUT9Q9Y231 359 aa6.49□□□□□ -1.37
VPS29-203ENST00000546588 CCDC168Q8NDH2 2452 aa6.49□□□□□ -1.37
VPS29-203ENST00000546588 A0A0G2JLM5 398 aa6.48□□□□□ -1.37
VPS29-203ENST00000546588 FAM74A7A6NL05 159 aa6.48□□□□□ -1.37
VPS29-203ENST00000546588 OR2J3O76001 311 aa6.48□□□□□ -1.37
VPS29-203ENST00000546588 NDUFA7O95182 113 aa6.48□□□□□ -1.37
VPS29-203ENST00000546588 PSG1P11464 419 aa6.48□□□□□ -1.37
VPS29-203ENST00000546588 CD99P14209 185 aa6.48□□□□□ -1.37
VPS29-203ENST00000546588 SRD5A1P18405 259 aa6.48□□□□□ -1.37
VPS29-203ENST00000546588 EDN2P20800 178 aa6.48□□□□□ -1.37
VPS29-203ENST00000546588 SRP14P37108 136 aaKnown RBP6.48□□□□□ -1.37
VPS29-203ENST00000546588 FAM74A3Q4VXF1 159 aa6.48□□□□□ -1.37
VPS29-203ENST00000546588 KHDC3LQ587J8 217 aa6.48□□□□□ -1.37
VPS29-203ENST00000546588 COL5A1-AS1Q5SY13 56 aa6.48□□□□□ -1.37
VPS29-203ENST00000546588 IL17RELQ6ZVW7 336 aa6.48□□□□□ -1.37
VPS29-203ENST00000546588 LINC01551Q86U37 167 aa6.48□□□□□ -1.37
VPS29-203ENST00000546588 SVBPQ8N300 66 aa6.48□□□□□ -1.37
VPS29-203ENST00000546588 OR51G1Q8NGK1 321 aa6.48□□□□□ -1.37
VPS29-203ENST00000546588 MRAP2Q96G30 205 aa6.48□□□□□ -1.37
VPS29-203ENST00000546588 FAM167A-AS1Q96KT0 104 aa6.48□□□□□ -1.37
VPS29-203ENST00000546588 SNHG12Q9BXW3 62 aa6.48□□□□□ -1.37
VPS29-203ENST00000546588 MANBALQ9NQG1 85 aa6.48□□□□□ -1.37
VPS29-203ENST00000546588 GNG7O60262 68 aa6.47□□□□□ -1.37
VPS29-203ENST00000546588 CXorf1O96002 111 aa6.47□□□□□ -1.37
VPS29-203ENST00000546588 APOC3P02656 99 aa6.47□□□□□ -1.37
VPS29-203ENST00000546588 HSPB1P04792 205 aaKnown RBP6.47□□□□□ -1.37
VPS29-203ENST00000546588 CRYBA1P05813 215 aa6.47□□□□□ -1.37
VPS29-203ENST00000546588 C8orf88P0DMB2 117 aa6.47□□□□□ -1.37
VPS29-203ENST00000546588 BCL2P10415 239 aa6.47□□□□□ -1.37
VPS29-203ENST00000546588 CCL20P78556 96 aa6.47□□□□□ -1.37
VPS29-203ENST00000546588 UBE2V1Q13404 147 aa6.47□□□□□ -1.37
VPS29-203ENST00000546588 FAM78BQ5VT40 261 aa6.47□□□□□ -1.37
VPS29-203ENST00000546588 PRR27Q6MZM9 219 aa6.47□□□□□ -1.37
VPS29-203ENST00000546588 Q6ZSV7 163 aa6.47□□□□□ -1.37
VPS29-203ENST00000546588 Q8N1X5 172 aa6.47□□□□□ -1.37
VPS29-203ENST00000546588 ZNF503Q96F45 646 aa6.47□□□□□ -1.37
VPS29-203ENST00000546588 MCRIP2Q9BUT9 160 aaKnown RBP6.47□□□□□ -1.37
VPS29-203ENST00000546588 PBDC1Q9BVG4 233 aa6.47□□□□□ -1.37
VPS29-203ENST00000546588 SLC25A22Q9H936 323 aa6.47□□□□□ -1.37
VPS29-203ENST00000546588 TMEM14CQ9P0S9 112 aa6.47□□□□□ -1.37
VPS29-203ENST00000546588 H3BRN7 92 aa6.46□□□□□ -1.38
VPS29-203ENST00000546588 MRPS12O15235 138 aaKnown RBP6.46□□□□□ -1.38
VPS29-203ENST00000546588 ORM1P02763 201 aa6.46□□□□□ -1.38
VPS29-203ENST00000546588 TRGV3P03979 118 aa6.46□□□□□ -1.38
VPS29-203ENST00000546588 GP9P14770 177 aa6.46□□□□□ -1.38
VPS29-203ENST00000546588 GATA2P23769 480 aaPredicted RBP6.46□□□□□ -1.38
VPS29-203ENST00000546588 TAS2R45P59539 299 aa6.46□□□□□ -1.38
VPS29-203ENST00000546588 SLC35B1P78383 322 aa6.46□□□□□ -1.38
VPS29-203ENST00000546588 TIGITQ495A1 244 aa6.46□□□□□ -1.38
VPS29-203ENST00000546588 PYY3Q5JQD4 70 aa6.46□□□□□ -1.38
VPS29-203ENST00000546588 C10orf113Q5VZT2 155 aa6.46□□□□□ -1.38
VPS29-203ENST00000546588 TEX38Q6PEX7 206 aa6.46□□□□□ -1.38
VPS29-203ENST00000546588 C15orf54Q8N8G6 183 aa6.46□□□□□ -1.38
VPS29-203ENST00000546588 ZNF418Q8TF45 676 aaPredicted RBP6.46□□□□□ -1.38
VPS29-203ENST00000546588 UBE2E2Q96LR5 201 aa6.46□□□□□ -1.38
VPS29-203ENST00000546588 SMR3AQ99954 134 aa6.46□□□□□ -1.38
VPS29-203ENST00000546588 SLC25A2Q9BXI2 301 aa6.46□□□□□ -1.38
VPS29-203ENST00000546588 CARHSP1Q9Y2V2 147 aaKnown RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms