RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 SERF2P84101 59 aa4.71□□□□□ -1.66
PRKDC-211ENST00000546304 DEFA6Q01524 100 aa4.71□□□□□ -1.66
PRKDC-211ENST00000546304 LGALSLQ3ZCW2 172 aaPredicted RBP4.71□□□□□ -1.66
PRKDC-211ENST00000546304 KHDC3LQ587J8 217 aa4.71□□□□□ -1.66
PRKDC-211ENST00000546304 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.71□□□□□ -1.66
PRKDC-211ENST00000546304 MIR17HGQ75NE6 70 aa4.71□□□□□ -1.66
PRKDC-211ENST00000546304 BPIFA4PQ86YQ2 179 aa4.71□□□□□ -1.66
PRKDC-211ENST00000546304 FAM24BQ8N5W8 94 aa4.71□□□□□ -1.66
PRKDC-211ENST00000546304 SLC25A2Q9BXI2 301 aa4.71□□□□□ -1.66
PRKDC-211ENST00000546304 MAP6D1Q9H9H5 199 aa4.71□□□□□ -1.66
PRKDC-211ENST00000546304 FUT9Q9Y231 359 aa4.71□□□□□ -1.66
PRKDC-211ENST00000546304 TRAV5A0A0B4J249 113 aa4.7□□□□□ -1.66
PRKDC-211ENST00000546304 OR11H12B2RN74 326 aa4.7□□□□□ -1.66
PRKDC-211ENST00000546304 BOLA2-SMG1P6H3BVE0 249 aa4.7□□□□□ -1.66
PRKDC-211ENST00000546304 ISLRO14498 428 aa4.7□□□□□ -1.66
PRKDC-211ENST00000546304 OR7C2O60412 319 aa4.7□□□□□ -1.66
PRKDC-211ENST00000546304 PYYP10082 97 aa4.7□□□□□ -1.66
PRKDC-211ENST00000546304 C4BPBP20851 252 aa4.7□□□□□ -1.66
PRKDC-211ENST00000546304 TAS2R45P59539 299 aa4.7□□□□□ -1.66
PRKDC-211ENST00000546304 SNRPD3P62318 126 aaKnown RBP4.7□□□□□ -1.66
PRKDC-211ENST00000546304 UBE2L3P68036 154 aaKnown RBP4.7□□□□□ -1.66
PRKDC-211ENST00000546304 TMEM41BQ5BJD5 291 aa4.7□□□□□ -1.66
PRKDC-211ENST00000546304 AKR1C8PQ5T2L2 129 aa4.7□□□□□ -1.66
PRKDC-211ENST00000546304 FAM122CQ6P4D5 195 aa4.7□□□□□ -1.66
PRKDC-211ENST00000546304 LCN15Q6UWW0 184 aa4.7□□□□□ -1.66
PRKDC-211ENST00000546304 SLC51BQ86UW2 128 aa4.7□□□□□ -1.66
PRKDC-211ENST00000546304 BAP18Q8IXM2 172 aa4.7□□□□□ -1.66
PRKDC-211ENST00000546304 OR10G4Q8NGN3 311 aa4.7□□□□□ -1.66
PRKDC-211ENST00000546304 OR10G9Q8NGN4 311 aa4.7□□□□□ -1.66
PRKDC-211ENST00000546304 OR10G7Q8NGN6 311 aa4.7□□□□□ -1.66
PRKDC-211ENST00000546304 MRAPQ8TCY5 172 aa4.7□□□□□ -1.66
PRKDC-211ENST00000546304 TMED6Q8WW62 240 aa4.7□□□□□ -1.66
PRKDC-211ENST00000546304 FAM167A-AS1Q96KT0 104 aa4.7□□□□□ -1.66
PRKDC-211ENST00000546304 C17orf77Q96MU5 243 aa4.7□□□□□ -1.66
PRKDC-211ENST00000546304 FAM110AQ9BQ89 295 aa4.7□□□□□ -1.66
PRKDC-211ENST00000546304 TMEM14CQ9P0S9 112 aa4.7□□□□□ -1.66
PRKDC-211ENST00000546304 UBQLN2Q9UHD9 624 aa4.7□□□□□ -1.66
PRKDC-211ENST00000546304 SMAD5-AS1Q9Y6J3 95 aa4.7□□□□□ -1.66
PRKDC-211ENST00000546304 A0A1W2PPV4 95 aa4.69□□□□□ -1.66
PRKDC-211ENST00000546304 H3BTX0 84 aa4.69□□□□□ -1.66
PRKDC-211ENST00000546304 SLC17A3O00476 420 aa4.69□□□□□ -1.66
PRKDC-211ENST00000546304 EIF3GO75821 320 aaKnown RBP eCLIP4.69□□□□□ -1.66
PRKDC-211ENST00000546304 SNRPCP09234 159 aaKnown RBP4.69□□□□□ -1.66
PRKDC-211ENST00000546304 OR10J4P0C629 311 aa4.69□□□□□ -1.66
PRKDC-211ENST00000546304 SEC11BP0C7V7 166 aa4.69□□□□□ -1.66
PRKDC-211ENST00000546304 ARL14EPLP0DKL9 152 aa4.69□□□□□ -1.66
PRKDC-211ENST00000546304 IGHV4-30-4P0DP06 118 aa4.69□□□□□ -1.66
PRKDC-211ENST00000546304 DEFB131AP59861 70 aa4.69□□□□□ -1.66
PRKDC-211ENST00000546304 PDE6HQ13956 83 aa4.69□□□□□ -1.66
PRKDC-211ENST00000546304 GUK1Q16774 197 aa4.69□□□□□ -1.66
PRKDC-211ENST00000546304 PSMG4Q5JS54 123 aa4.69□□□□□ -1.66
PRKDC-211ENST00000546304 PQLC2Q6ZP29 291 aa4.69□□□□□ -1.66
PRKDC-211ENST00000546304 RPP25LQ8N5L8 163 aaKnown RBP4.69□□□□□ -1.66
PRKDC-211ENST00000546304 DEFB125Q8N687 156 aa4.69□□□□□ -1.66
PRKDC-211ENST00000546304 FXYD5Q96DB9 178 aa4.69□□□□□ -1.66
PRKDC-211ENST00000546304 SLC50A1Q9BRV3 221 aa4.69□□□□□ -1.66
PRKDC-211ENST00000546304 PAXXQ9BUH6 204 aa4.69□□□□□ -1.66
PRKDC-211ENST00000546304 ACTR3CQ9C0K3 210 aaPredicted RBP4.69□□□□□ -1.66
PRKDC-211ENST00000546304 HRH4Q9H3N8 390 aa4.69□□□□□ -1.66
PRKDC-211ENST00000546304 SRD5A3Q9H8P0 318 aa4.69□□□□□ -1.66
PRKDC-211ENST00000546304 RPRMQ9NS64 109 aa4.69□□□□□ -1.66
PRKDC-211ENST00000546304 TRBV19A0A075B6N1 114 aa4.68□□□□□ -1.66
PRKDC-211ENST00000546304 TRAV8-2A0A0B4J237 113 aa4.68□□□□□ -1.66
PRKDC-211ENST00000546304 CTXND1A0A1B0GTU2 59 aa4.68□□□□□ -1.66
PRKDC-211ENST00000546304 MAP1LC3B2A6NCE7 125 aa4.68□□□□□ -1.66
PRKDC-211ENST00000546304 UMAD1C9J7I0 102 aa4.68□□□□□ -1.66
PRKDC-211ENST00000546304 H3BQ15 152 aa4.68□□□□□ -1.66
PRKDC-211ENST00000546304 HMGB3O15347 200 aaKnown RBP4.68□□□□□ -1.66
PRKDC-211ENST00000546304 ZNF253O75346 499 aa4.68□□□□□ -1.66
PRKDC-211ENST00000546304 STAG3L2P0CL84 134 aa4.68□□□□□ -1.66
PRKDC-211ENST00000546304 STAG3L3P0CL85 134 aa4.68□□□□□ -1.66
PRKDC-211ENST00000546304 HIST1H1EP10412 219 aaKnown RBP4.68□□□□□ -1.66
PRKDC-211ENST00000546304 ID1P41134 155 aa4.68□□□□□ -1.66
PRKDC-211ENST00000546304 ZNF726P1Q15940 193 aa4.68□□□□□ -1.66
PRKDC-211ENST00000546304 EIF5AL1Q6IS14 154 aaKnown RBP4.68□□□□□ -1.66
PRKDC-211ENST00000546304 SSX7Q7RTT5 188 aa4.68□□□□□ -1.66
PRKDC-211ENST00000546304 APRG1Q8IVJ8 170 aa4.68□□□□□ -1.66
PRKDC-211ENST00000546304 RNF182Q8N6D2 247 aa4.68□□□□□ -1.66
PRKDC-211ENST00000546304 LRRC20Q8TCA0 184 aa4.68□□□□□ -1.66
PRKDC-211ENST00000546304 BLNKQ8WV28 456 aa4.68□□□□□ -1.66
PRKDC-211ENST00000546304 RAB24Q969Q5 203 aa4.68□□□□□ -1.66
PRKDC-211ENST00000546304 PHYHIPLQ96FC7 376 aa4.68□□□□□ -1.66
PRKDC-211ENST00000546304 MAP1LC3BQ9GZQ8 125 aa4.68□□□□□ -1.66
PRKDC-211ENST00000546304 OR51M1Q9H341 326 aa4.68□□□□□ -1.66
PRKDC-211ENST00000546304 ZNF331Q9NQX6 463 aaPredicted RBP4.68□□□□□ -1.66
PRKDC-211ENST00000546304 ZNF586Q9NXT0 402 aa4.68□□□□□ -1.66
PRKDC-211ENST00000546304 A8MZ25 164 aa4.67□□□□□ -1.66
PRKDC-211ENST00000546304 NDUFB4O95168 129 aa4.67□□□□□ -1.66
PRKDC-211ENST00000546304 FRMD6-AS1P0C7T7 363 aa4.67□□□□□ -1.66
PRKDC-211ENST00000546304 HLA-DMBP28068 263 aa4.67□□□□□ -1.66
PRKDC-211ENST00000546304 GCHFRP30047 84 aa4.67□□□□□ -1.66
PRKDC-211ENST00000546304 FHITP49789 147 aa4.67□□□□□ -1.66
PRKDC-211ENST00000546304 CMC4P56277 68 aaPredicted RBP4.67□□□□□ -1.66
PRKDC-211ENST00000546304 DEFB1P60022 68 aa4.67□□□□□ -1.66
PRKDC-211ENST00000546304 DPPA3Q6W0C5 159 aa4.67□□□□□ -1.66
PRKDC-211ENST00000546304 FOXI2Q6ZQN5 318 aa4.67□□□□□ -1.66
PRKDC-211ENST00000546304 IQCF2Q8IXL9 164 aa4.67□□□□□ -1.66
PRKDC-211ENST00000546304 ZNF738Q8NE65 137 aa4.67□□□□□ -1.66
PRKDC-211ENST00000546304 FAM213BQ8TBF2 198 aa4.67□□□□□ -1.66
PRKDC-211ENST00000546304 SAT2Q96F10 170 aaPredicted RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms