RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 SRSF9Q13242 221 aaKnown RBP eCLIP6.27□□□□□ -1.41
UBR1-202ENST00000546274 DUX4L9Q6RFH8 374 aaPredicted RBP6.27□□□□□ -1.41
UBR1-202ENST00000546274 ZFP2Q6ZN57 461 aa6.27□□□□□ -1.41
UBR1-202ENST00000546274 PPP1R27Q86WC6 154 aa6.27□□□□□ -1.41
UBR1-202ENST00000546274 RBMXL3Q8N7X1 1067 aaKnown RBP6.27□□□□□ -1.41
UBR1-202ENST00000546274 FDCSPQ8NFU4 85 aa6.27□□□□□ -1.41
UBR1-202ENST00000546274 DLX4Q92988 240 aaPredicted RBP6.27□□□□□ -1.41
UBR1-202ENST00000546274 S1PR3Q99500 378 aa6.27□□□□□ -1.41
UBR1-202ENST00000546274 ZNF71Q9NQZ8 489 aaPredicted RBP6.27□□□□□ -1.41
UBR1-202ENST00000546274 FOXA2Q9Y261 457 aaPredicted RBP6.27□□□□□ -1.41
UBR1-202ENST00000546274 A0A096LNJ9 63 aa6.26□□□□□ -1.41
UBR1-202ENST00000546274 PRB4P10163 310 aaPredicted RBP6.26□□□□□ -1.41
UBR1-202ENST00000546274 RPL7P18124 248 aaKnown RBP6.26□□□□□ -1.41
UBR1-202ENST00000546274 ATP6V0E2Q8NHE4 81 aa6.26□□□□□ -1.41
UBR1-202ENST00000546274 CALYQ9NYX4 217 aa6.26□□□□□ -1.41
UBR1-202ENST00000546274 TRAV8-1A0A0A6YYK1 113 aa6.26□□□□□ -1.41
UBR1-202ENST00000546274 PEX7O00628 323 aa6.26□□□□□ -1.41
UBR1-202ENST00000546274 ERVK-16P61578 105 aa6.26□□□□□ -1.41
UBR1-202ENST00000546274 MORN5Q5VZ52 161 aa6.26□□□□□ -1.41
UBR1-202ENST00000546274 SEM1Q6ZVN7 128 aa6.26□□□□□ -1.41
UBR1-202ENST00000546274 TEN1Q86WV5 123 aa6.26□□□□□ -1.41
UBR1-202ENST00000546274 RPRMLQ8N4K4 120 aa6.26□□□□□ -1.41
UBR1-202ENST00000546274 PLCE1Q9P212 2302 aa6.26□□□□□ -1.41
UBR1-202ENST00000546274 SLC25A15Q9Y619 301 aa6.26□□□□□ -1.41
UBR1-202ENST00000546274 SVILO95425 2214 aa6.26□□□□□ -1.41
UBR1-202ENST00000546274 IGKV1OR2-108A0A075B7D4 117 aa6.25□□□□□ -1.41
UBR1-202ENST00000546274 IL4P05112 153 aa6.25□□□□□ -1.41
UBR1-202ENST00000546274 SRSF1Q07955 248 aaKnown RBP eCLIP6.25□□□□□ -1.413e-6■■■■□ 22.2
UBR1-202ENST00000546274 IGFL2Q6UWQ7 119 aa6.25□□□□□ -1.41
UBR1-202ENST00000546274 RBPMS2Q6ZRY4 209 aaKnown RBP6.25□□□□□ -1.41
UBR1-202ENST00000546274 URB1O60287 2271 aaKnown RBP6.25□□□□□ -1.41
UBR1-202ENST00000546274 BSNQ9UPA5 3926 aa6.25□□□□□ -1.41
UBR1-202ENST00000546274 PRSS1P07477 247 aa6.25□□□□□ -1.41
UBR1-202ENST00000546274 KIR2DS2P43631 304 aa6.25□□□□□ -1.41
UBR1-202ENST00000546274 FAM201AQ5SY85 155 aa6.25□□□□□ -1.41
UBR1-202ENST00000546274 KLF12Q9Y4X4 402 aa6.25□□□□□ -1.41
UBR1-202ENST00000546274 TMEM262E9PQX1 116 aa6.25□□□□□ -1.41
UBR1-202ENST00000546274 PLAUP00749 431 aa6.25□□□□□ -1.41
UBR1-202ENST00000546274 WT1P19544 449 aaPredicted RBP6.25□□□□□ -1.41
UBR1-202ENST00000546274 CIARTQ8N365 385 aaPredicted RBP6.25□□□□□ -1.41
UBR1-202ENST00000546274 HIGD1BQ9P298 99 aa6.25□□□□□ -1.41
UBR1-202ENST00000546274 SLC25A10Q9UBX3 287 aaPredicted RBP6.25□□□□□ -1.41
UBR1-202ENST00000546274 CCL11P51671 97 aa6.24□□□□□ -1.41
UBR1-202ENST00000546274 HSPE1P61604 102 aaKnown RBP6.24□□□□□ -1.41
UBR1-202ENST00000546274 RASL11BQ9BPW5 248 aa6.24□□□□□ -1.41
UBR1-202ENST00000546274 CHCHD5Q9BSY4 110 aa6.24□□□□□ -1.41
UBR1-202ENST00000546274 DMXL1Q9Y485 3027 aa6.24□□□□□ -1.41
UBR1-202ENST00000546274 HOXA3O43365 443 aaPredicted RBP6.24□□□□□ -1.41
UBR1-202ENST00000546274 C8orf88P0DMB2 117 aa6.24□□□□□ -1.41
UBR1-202ENST00000546274 POU2AF1Q16633 256 aa6.24□□□□□ -1.41
UBR1-202ENST00000546274 ZC2HC1BQ5TFG8 222 aa6.24□□□□□ -1.41
UBR1-202ENST00000546274 ANKRD29Q8N6D5 301 aa6.24□□□□□ -1.41
UBR1-202ENST00000546274 MAPKAPK5-AS1Q8N8E1 139 aa6.24□□□□□ -1.41
UBR1-202ENST00000546274 SRRM4A7MD48 611 aaKnown RBP6.24□□□□□ -1.41
UBR1-202ENST00000546274 H3BTX0 84 aa6.24□□□□□ -1.41
UBR1-202ENST00000546274 NDUFS7O75251 213 aa6.24□□□□□ -1.41
UBR1-202ENST00000546274 IGKV1-16P04430 117 aa6.24□□□□□ -1.41
UBR1-202ENST00000546274 ARMS2P0C7Q2 107 aa6.24□□□□□ -1.41
UBR1-202ENST00000546274 COL8A1P27658 744 aa6.24□□□□□ -1.41
UBR1-202ENST00000546274 MZT1Q08AG7 82 aa6.24□□□□□ -1.41
UBR1-202ENST00000546274 MLANAQ16655 118 aa6.24□□□□□ -1.41
UBR1-202ENST00000546274 TNCP24821 2201 aa6.23□□□□□ -1.41
UBR1-202ENST00000546274 LINC01549A6NIU2 74 aa6.23□□□□□ -1.41
UBR1-202ENST00000546274 A8MWV9 139 aa6.23□□□□□ -1.41
UBR1-202ENST00000546274 MOSP00540 346 aa6.23□□□□□ -1.41
UBR1-202ENST00000546274 HBDP02042 147 aa6.23□□□□□ -1.41
UBR1-202ENST00000546274 C3orf36Q3SXR2 165 aa6.23□□□□□ -1.41
UBR1-202ENST00000546274 FAM19A5Q7Z5A7 132 aaPredicted RBP6.23□□□□□ -1.41
UBR1-202ENST00000546274 ITLN1Q8WWA0 313 aa6.23□□□□□ -1.41
UBR1-202ENST00000546274 SLC25A33Q9BSK2 321 aa6.23□□□□□ -1.41
UBR1-202ENST00000546274 TMEM160Q9NX00 188 aa6.23□□□□□ -1.41
UBR1-202ENST00000546274 ZNRD1Q9P1U0 126 aa6.23□□□□□ -1.41
UBR1-202ENST00000546274 D6R8Y8 96 aa6.23□□□□□ -1.41
UBR1-202ENST00000546274 MORN3Q6PF18 240 aaPredicted RBP6.23□□□□□ -1.41
UBR1-202ENST00000546274 RPEQ96AT9 228 aa6.23□□□□□ -1.41
UBR1-202ENST00000546274 TMEM133Q9H2Q1 129 aa6.23□□□□□ -1.41
UBR1-202ENST00000546274 ONECUT1Q9UBC0 465 aa6.23□□□□□ -1.41
UBR1-202ENST00000546274 PROCRQ9UNN8 238 aa6.23□□□□□ -1.41
UBR1-202ENST00000546274 SPTBN4Q9H254 2564 aa6.22□□□□□ -1.41
UBR1-202ENST00000546274 DCHS1Q96JQ0 3298 aa6.22□□□□□ -1.41
UBR1-202ENST00000546274 IGLV3-9A0A075B6K5 115 aa6.22□□□□□ -1.41
UBR1-202ENST00000546274 SPRY3O43610 288 aa6.22□□□□□ -1.41
UBR1-202ENST00000546274 KALRNO60229 2985 aa6.22□□□□□ -1.41
UBR1-202ENST00000546274 MFAP4P55083 255 aa6.22□□□□□ -1.41
UBR1-202ENST00000546274 UCNP55089 124 aa6.22□□□□□ -1.41
UBR1-202ENST00000546274 PRCDQ00LT1 54 aa6.22□□□□□ -1.41
UBR1-202ENST00000546274 ZNF329Q86UD4 541 aa6.22□□□□□ -1.41
UBR1-202ENST00000546274 OR9G1Q8NH87 305 aa6.22□□□□□ -1.41
UBR1-202ENST00000546274 RND1Q92730 232 aa6.22□□□□□ -1.41
UBR1-202ENST00000546274 RASL10AQ92737 203 aa6.22□□□□□ -1.41
UBR1-202ENST00000546274 FLYWCH2Q96CP2 140 aaKnown RBP6.22□□□□□ -1.41
UBR1-202ENST00000546274 GAFA1Q96PS6 74 aa6.22□□□□□ -1.41
UBR1-202ENST00000546274 ASCL2Q99929 193 aa6.22□□□□□ -1.41
UBR1-202ENST00000546274 TMEM126AQ9H061 195 aa6.22□□□□□ -1.41
UBR1-202ENST00000546274 LINC00574Q9H8X3 128 aa6.22□□□□□ -1.41
UBR1-202ENST00000546274 EDA2RQ9HAV5 297 aa6.22□□□□□ -1.41
UBR1-202ENST00000546274 EPDR1Q9UM22 224 aa6.22□□□□□ -1.41
UBR1-202ENST00000546274 RAXQ9Y2V3 346 aa6.22□□□□□ -1.41
UBR1-202ENST00000546274 CADP27708 2225 aa6.22□□□□□ -1.41
UBR1-202ENST00000546274 GATA4P43694 442 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms