RNA–Protein interactions for RNA: ENST00000546079.5

CLPTM1-203, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-203ENST00000546079 CCL13Q99616 98 aa13.06□□□□□ -0.32
CLPTM1-203ENST00000546079 LINC00312Q9Y6C7 94 aa13.06□□□□□ -0.32
CLPTM1-203ENST00000546079 SPRY3O43610 288 aa13.05□□□□□ -0.32
CLPTM1-203ENST00000546079 LYZP61626 148 aa13.05□□□□□ -0.32
CLPTM1-203ENST00000546079 ZNF418Q8TF45 676 aaPredicted RBP13.05□□□□□ -0.32
CLPTM1-203ENST00000546079 CFAP47Q6ZTR5 3102 aa13.05□□□□□ -0.32
CLPTM1-203ENST00000546079 TANC2Q9HCD6 1990 aa13.05□□□□□ -0.32
CLPTM1-203ENST00000546079 PRR14LQ5THK1 2151 aa13.05□□□□□ -0.32
CLPTM1-203ENST00000546079 VMA21Q3ZAQ7 101 aa13.05□□□□□ -0.32
CLPTM1-203ENST00000546079 AMTNQ6UX39 209 aa13.05□□□□□ -0.32
CLPTM1-203ENST00000546079 FAM216BQ8N7L0 139 aa13.05□□□□□ -0.32
CLPTM1-203ENST00000546079 ASCL2Q99929 193 aa13.05□□□□□ -0.32
CLPTM1-203ENST00000546079 FCER1GP30273 86 aa13.04□□□□□ -0.32
CLPTM1-203ENST00000546079 MRGPRG-AS1Q2M3A8 158 aa13.04□□□□□ -0.32
CLPTM1-203ENST00000546079 SIGLEC15Q6ZMC9 328 aa13.04□□□□□ -0.32
CLPTM1-203ENST00000546079 C9orf106Q8NAJ2 232 aa13.04□□□□□ -0.32
CLPTM1-203ENST00000546079 DEFB108BQ8NET1 73 aa13.04□□□□□ -0.32
CLPTM1-203ENST00000546079 NGBQ9NPG2 151 aa13.04□□□□□ -0.32
CLPTM1-203ENST00000546079 PRSS1P07477 247 aa13.04□□□□□ -0.32
CLPTM1-203ENST00000546079 RRN3P1Q2M238 152 aa13.04□□□□□ -0.32
CLPTM1-203ENST00000546079 Q6ZS92 163 aa13.04□□□□□ -0.32
CLPTM1-203ENST00000546079 GTSCR1Q86UQ5 136 aa13.04□□□□□ -0.32
CLPTM1-203ENST00000546079 FAM169BQ8N8A8 192 aa13.04□□□□□ -0.32
CLPTM1-203ENST00000546079 SMKR1H3BMG3 65 aa13.03□□□□□ -0.32
CLPTM1-203ENST00000546079 K7EM74 188 aa13.03□□□□□ -0.32
CLPTM1-203ENST00000546079 DPM2O94777 84 aa13.03□□□□□ -0.32
CLPTM1-203ENST00000546079 ZC2HC1BQ5TFG8 222 aa13.03□□□□□ -0.32
CLPTM1-203ENST00000546079 C8orf86Q6ZUL3 223 aa13.03□□□□□ -0.32
CLPTM1-203ENST00000546079 SCNM1Q9BWG6 230 aa13.03□□□□□ -0.32
CLPTM1-203ENST00000546079 MAP1LC3AQ9H492 121 aa13.03□□□□□ -0.32
CLPTM1-203ENST00000546079 TPSG1Q9NRR2 321 aa13.03□□□□□ -0.32
CLPTM1-203ENST00000546079 SPENQ96T58 3664 aaKnown RBP13.03□□□□□ -0.32
CLPTM1-203ENST00000546079 INTS1Q8N201 2190 aaKnown RBP13.03□□□□□ -0.32
CLPTM1-203ENST00000546079 ATP5LO75964 103 aa13.02□□□□□ -0.32
CLPTM1-203ENST00000546079 LEPP41159 167 aa13.02□□□□□ -0.32
CLPTM1-203ENST00000546079 C20orf78Q9BR46 151 aa13.02□□□□□ -0.32
CLPTM1-203ENST00000546079 CYSLTR1Q9Y271 337 aa13.02□□□□□ -0.32
CLPTM1-203ENST00000546079 IGHV3-21A0A0B4J1V1 117 aa13.02□□□□□ -0.33
CLPTM1-203ENST00000546079 A0A1B0GWB2 263 aa13.02□□□□□ -0.33
CLPTM1-203ENST00000546079 K7EMI3 77 aa13.02□□□□□ -0.33
CLPTM1-203ENST00000546079 TSPAN13O95857 204 aa13.02□□□□□ -0.33
CLPTM1-203ENST00000546079 NBL1P41271 181 aa13.02□□□□□ -0.33
CLPTM1-203ENST00000546079 FOXI1Q12951 378 aa13.02□□□□□ -0.33
CLPTM1-203ENST00000546079 KLRD1Q13241 179 aa13.02□□□□□ -0.33
CLPTM1-203ENST00000546079 ATP6V0E2Q8NHE4 81 aa13.02□□□□□ -0.33
CLPTM1-203ENST00000546079 C17orf77Q96MU5 243 aa13.02□□□□□ -0.33
CLPTM1-203ENST00000546079 C8orf49Q96NF6 230 aa13.02□□□□□ -0.33
CLPTM1-203ENST00000546079 APOMO95445 188 aa13.01□□□□□ -0.33
CLPTM1-203ENST00000546079 LCNL1Q6ZST4 164 aa13.01□□□□□ -0.33
CLPTM1-203ENST00000546079 TMEM133Q9H2Q1 129 aa13.01□□□□□ -0.33
CLPTM1-203ENST00000546079 CDIP1Q9H305 208 aa13.01□□□□□ -0.33
CLPTM1-203ENST00000546079 SVILO95425 2214 aa13.01□□□□□ -0.33
CLPTM1-203ENST00000546079 ZFHX2Q9C0A1 2572 aaPredicted RBP13.01□□□□□ -0.33
CLPTM1-203ENST00000546079 TMSB15BA0A087X1C1 80 aa13.01□□□□□ -0.33
CLPTM1-203ENST00000546079 DIAPH2-AS1Q14236 149 aa13.01□□□□□ -0.33
CLPTM1-203ENST00000546079 TWIST1Q15672 202 aa13.01□□□□□ -0.33
CLPTM1-203ENST00000546079 NXT2Q9NPJ8 142 aaKnown RBP13.01□□□□□ -0.33
CLPTM1-203ENST00000546079 MUC6Q6W4X9 2439 aa13.01□□□□□ -0.33
CLPTM1-203ENST00000546079 PRRG2O14669 202 aa13□□□□□ -0.33
CLPTM1-203ENST00000546079 SHANK2-AS3Q9BTD1 123 aa13□□□□□ -0.33
CLPTM1-203ENST00000546079 GVINP1Q7Z2Y8 2422 aa13□□□□□ -0.33
CLPTM1-203ENST00000546079 CEP250Q9BV73 2442 aa13□□□□□ -0.33
CLPTM1-203ENST00000546079 TMEM8BA6NDV4 472 aa13□□□□□ -0.33
CLPTM1-203ENST00000546079 SH2D1AO60880 128 aa13□□□□□ -0.33
CLPTM1-203ENST00000546079 SPINK8P0C7L1 97 aa13□□□□□ -0.33
CLPTM1-203ENST00000546079 COX8CQ7Z4L0 72 aa13□□□□□ -0.33
CLPTM1-203ENST00000546079 MAPKAPK5-AS1Q8N8E1 139 aa13□□□□□ -0.33
CLPTM1-203ENST00000546079 C1QTNF4Q9BXJ3 329 aa13□□□□□ -0.33
CLPTM1-203ENST00000546079 OR11H12B2RN74 326 aa12.99□□□□□ -0.33
CLPTM1-203ENST00000546079 GLRXP35754 106 aa12.99□□□□□ -0.33
CLPTM1-203ENST00000546079 RPL27AP46776 148 aaKnown RBP12.99□□□□□ -0.33
CLPTM1-203ENST00000546079 C5orf64Q2M2E5 130 aa12.99□□□□□ -0.33
CLPTM1-203ENST00000546079 IGFL3Q6UXB1 125 aa12.99□□□□□ -0.33
CLPTM1-203ENST00000546079 SYT8Q8NBV8 401 aa12.99□□□□□ -0.33
CLPTM1-203ENST00000546079 OR11H1Q8NG94 326 aa12.99□□□□□ -0.33
CLPTM1-203ENST00000546079 OR11H2Q8NH07 326 aa12.99□□□□□ -0.33
CLPTM1-203ENST00000546079 FOXC2Q99958 501 aa12.99□□□□□ -0.33
CLPTM1-203ENST00000546079 SLC25A15Q9Y619 301 aa12.99□□□□□ -0.33
CLPTM1-203ENST00000546079 IGLV3-9A0A075B6K5 115 aa12.99□□□□□ -0.33
CLPTM1-203ENST00000546079 LINC00311Q8N616 119 aa12.99□□□□□ -0.33
CLPTM1-203ENST00000546079 ARFGEF3Q5TH69 2177 aa12.98□□□□□ -0.33
CLPTM1-203ENST00000546079 LINC01619G3V211 115 aa12.98□□□□□ -0.33
CLPTM1-203ENST00000546079 C8orf31Q8N9H6 132 aa12.98□□□□□ -0.33
CLPTM1-203ENST00000546079 RNF185Q96GF1 192 aa12.98□□□□□ -0.33
CLPTM1-203ENST00000546079 HIST1H4GQ99525 98 aa12.98□□□□□ -0.33
CLPTM1-203ENST00000546079 RASL11BQ9BPW5 248 aa12.98□□□□□ -0.33
CLPTM1-203ENST00000546079 H3BRN7 92 aa12.97□□□□□ -0.33
CLPTM1-203ENST00000546079 M0R3E3 92 aa12.97□□□□□ -0.33
CLPTM1-203ENST00000546079 CCL3L1P16619 93 aa12.97□□□□□ -0.33
CLPTM1-203ENST00000546079 TEX36Q5VZQ5 186 aa12.97□□□□□ -0.33
CLPTM1-203ENST00000546079 SEM1Q6ZVN7 128 aa12.97□□□□□ -0.33
CLPTM1-203ENST00000546079 TMEM158Q8WZ71 300 aa12.97□□□□□ -0.33
CLPTM1-203ENST00000546079 AKAP13Q12802 2813 aa12.97□□□□□ -0.33
CLPTM1-203ENST00000546079 TRBV7-3A0A075B6L6 115 aa12.97□□□□□ -0.33
CLPTM1-203ENST00000546079 TNFAIP6P98066 277 aaPredicted RBP12.97□□□□□ -0.33
CLPTM1-203ENST00000546079 CFAP126Q5VTH2 177 aa12.97□□□□□ -0.33
CLPTM1-203ENST00000546079 HEATR1Q9H583 2144 aaKnown RBP12.97□□□□□ -0.33
CLPTM1-203ENST00000546079 TRAV40A0A0B4J280 105 aa12.96□□□□□ -0.33
CLPTM1-203ENST00000546079 MRPS12O15235 138 aaKnown RBP12.96□□□□□ -0.33
CLPTM1-203ENST00000546079 IGKV1-17P01599 117 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms