RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	NISCH	Q9Y2I1	1504 aa		0.32	□□□□□ -2.36
RAP1B-231	ENST00000544639	MEGF8	Q7Z7M0	2845 aa		0.31	□□□□□ -2.36
RAP1B-231	ENST00000544639	PTPRD	P23468	1912 aa		0.31	□□□□□ -2.36
RAP1B-231	ENST00000544639		A0A096LPI6	279 aa		0.31	□□□□□ -2.36
RAP1B-231	ENST00000544639	ZNF727	A8MUV8	499 aa		0.31	□□□□□ -2.36
RAP1B-231	ENST00000544639	SPINK7	P58062	85 aa		0.31	□□□□□ -2.36
RAP1B-231	ENST00000544639	HBB	P68871	147 aa		0.31	□□□□□ -2.36
RAP1B-231	ENST00000544639	OCIAD2	Q56VL3	154 aa		0.31	□□□□□ -2.36
RAP1B-231	ENST00000544639	FAM216B	Q8N7L0	139 aa		0.31	□□□□□ -2.36
RAP1B-231	ENST00000544639	OR13C6P	Q8NH95	151 aa		0.31	□□□□□ -2.36
RAP1B-231	ENST00000544639	CD109	Q6YHK3	1445 aa		0.3	□□□□□ -2.36
RAP1B-231	ENST00000544639	NCAPD3	P42695	1498 aa		0.3	□□□□□ -2.36
RAP1B-231	ENST00000544639	MFSD11	O43934	449 aa		0.3	□□□□□ -2.36
RAP1B-231	ENST00000544639	PPP1R2	P41236	205 aa		0.3	□□□□□ -2.36
RAP1B-231	ENST00000544639	ZNF137P	P52743	207 aa		0.3	□□□□□ -2.36
RAP1B-231	ENST00000544639		Q6ZS92	163 aa		0.3	□□□□□ -2.36
RAP1B-231	ENST00000544639	RTL8A	Q9BWD3	113 aa		0.3	□□□□□ -2.36
RAP1B-231	ENST00000544639	FAT4	Q6V0I7	4981 aa		0.3	□□□□□ -2.36
RAP1B-231	ENST00000544639	FRMPD1	Q5SYB0	1578 aa		0.3	□□□□□ -2.36
RAP1B-231	ENST00000544639	GPR31	O00270	319 aa		0.29	□□□□□ -2.36
RAP1B-231	ENST00000544639	PIAS1	O75925	651 aa		0.29	□□□□□ -2.36
RAP1B-231	ENST00000544639	CSN2	P05814	226 aa		0.29	□□□□□ -2.36
RAP1B-231	ENST00000544639	SPINT3	P49223	89 aa		0.29	□□□□□ -2.36
RAP1B-231	ENST00000544639	RPL19	P84098	196 aa	Known RBP	0.29	□□□□□ -2.36
RAP1B-231	ENST00000544639		Q6ZQY7	126 aa		0.29	□□□□□ -2.36
RAP1B-231	ENST00000544639	BDP1	A6H8Y1	2624 aa		0.29	□□□□□ -2.36
RAP1B-231	ENST00000544639	TNC	P24821	2201 aa		0.29	□□□□□ -2.36
RAP1B-231	ENST00000544639	KCP	Q6ZWJ8	1503 aa		0.28	□□□□□ -2.36
RAP1B-231	ENST00000544639		A0A0J9YY99	117 aa		0.28	□□□□□ -2.36
RAP1B-231	ENST00000544639	GNG3	P63215	75 aa		0.28	□□□□□ -2.36
RAP1B-231	ENST00000544639	RTL8B	Q17RB0	113 aa		0.28	□□□□□ -2.36
RAP1B-231	ENST00000544639	C6orf52	Q5T4I8	152 aa		0.28	□□□□□ -2.36
RAP1B-231	ENST00000544639	LINC00299	Q6ZSB3	139 aa		0.28	□□□□□ -2.36
RAP1B-231	ENST00000544639	TMED4	Q7Z7H5	227 aa		0.28	□□□□□ -2.36
RAP1B-231	ENST00000544639	LINC00269	Q8N2A0	174 aa		0.28	□□□□□ -2.36
RAP1B-231	ENST00000544639	LIMD2	Q9BT23	127 aa		0.28	□□□□□ -2.36
RAP1B-231	ENST00000544639	OR2H1	Q9GZK4	316 aa		0.28	□□□□□ -2.36
RAP1B-231	ENST00000544639	CST11	Q9H112	138 aa		0.28	□□□□□ -2.36
RAP1B-231	ENST00000544639	JPT1	Q9UK76	154 aa		0.28	□□□□□ -2.36
RAP1B-231	ENST00000544639	BOK	Q9UMX3	212 aa	Predicted RBP	0.28	□□□□□ -2.36
RAP1B-231	ENST00000544639	CAMSAP2	Q08AD1	1489 aa		0.28	□□□□□ -2.37
RAP1B-231	ENST00000544639	SYNE1	Q8NF91	8797 aa	Known RBP	0.28	□□□□□ -2.37
RAP1B-231	ENST00000544639	RPL35	P42766	123 aa	Known RBP	0.27	□□□□□ -2.37
RAP1B-231	ENST00000544639	DIAPH2-AS1	Q14236	149 aa		0.27	□□□□□ -2.37
RAP1B-231	ENST00000544639	FKBP1C	Q5VVH2	108 aa		0.27	□□□□□ -2.37
RAP1B-231	ENST00000544639	SMIM20	Q8N5G0	67 aa		0.27	□□□□□ -2.37
RAP1B-231	ENST00000544639	PLAC4	Q8WY50	150 aa		0.27	□□□□□ -2.37
RAP1B-231	ENST00000544639	PLEKHB2	Q96CS7	222 aa		0.27	□□□□□ -2.37
RAP1B-231	ENST00000544639	FAM103A1	Q9BTL3	118 aa	Known RBP	0.27	□□□□□ -2.37
RAP1B-231	ENST00000544639	STOML2	Q9UJZ1	356 aa		0.27	□□□□□ -2.37
RAP1B-231	ENST00000544639	MAST4	O15021	2626 aa		0.27	□□□□□ -2.37
RAP1B-231	ENST00000544639	CST7	O76096	145 aa		0.26	□□□□□ -2.37
RAP1B-231	ENST00000544639	CCL4	P13236	92 aa		0.26	□□□□□ -2.37
RAP1B-231	ENST00000544639	PDE6G	P18545	87 aa		0.26	□□□□□ -2.37
RAP1B-231	ENST00000544639	KDELR1	P24390	212 aa		0.26	□□□□□ -2.37
RAP1B-231	ENST00000544639	LTC4S	Q16873	150 aa		0.26	□□□□□ -2.37
RAP1B-231	ENST00000544639	ZCCHC23	Q6ZST2	131 aa		0.26	□□□□□ -2.37
RAP1B-231	ENST00000544639		Q86TA4	180 aa		0.26	□□□□□ -2.37
RAP1B-231	ENST00000544639	AP3S1	Q92572	193 aa		0.26	□□□□□ -2.37
RAP1B-231	ENST00000544639	RMND5B	Q96G75	393 aa	Predicted RBP	0.26	□□□□□ -2.37
RAP1B-231	ENST00000544639	CARD19	Q96LW7	228 aa		0.26	□□□□□ -2.37
RAP1B-231	ENST00000544639	CCL19	Q99731	98 aa		0.26	□□□□□ -2.37
RAP1B-231	ENST00000544639	EIF3A	Q14152	1382 aa	Known RBP	0.26	□□□□□ -2.37
RAP1B-231	ENST00000544639	RTL9	Q8NET4	1388 aa		0.26	□□□□□ -2.37
RAP1B-231	ENST00000544639	MYH3	P11055	1940 aa		0.26	□□□□□ -2.37
RAP1B-231	ENST00000544639	FXYD6P3	P58550	94 aa		0.25	□□□□□ -2.37
RAP1B-231	ENST00000544639	POU6F1	Q14863	301 aa		0.25	□□□□□ -2.37
RAP1B-231	ENST00000544639	VMA21	Q3ZAQ7	101 aa		0.25	□□□□□ -2.37
RAP1B-231	ENST00000544639	LYG2	Q86SG7	212 aa		0.25	□□□□□ -2.37
RAP1B-231	ENST00000544639	OTOR	Q9NRC9	128 aa		0.25	□□□□□ -2.37
RAP1B-231	ENST00000544639	GLRX	P35754	106 aa		0.24	□□□□□ -2.37
RAP1B-231	ENST00000544639	TAS2R41	P59536	307 aa		0.24	□□□□□ -2.37
RAP1B-231	ENST00000544639	RPL37A	P61513	92 aa	Known RBP	0.24	□□□□□ -2.37
RAP1B-231	ENST00000544639	BASP1	P80723	227 aa	Known RBP	0.24	□□□□□ -2.37
RAP1B-231	ENST00000544639	NEK7	Q8TDX7	302 aa		0.24	□□□□□ -2.37
RAP1B-231	ENST00000544639	TPRKB	Q9Y3C4	175 aa		0.24	□□□□□ -2.37
RAP1B-231	ENST00000544639	UFC1	Q9Y3C8	167 aa		0.24	□□□□□ -2.37
RAP1B-231	ENST00000544639		A6NN06	94 aa		0.23	□□□□□ -2.37
RAP1B-231	ENST00000544639	C10orf111	Q8N326	155 aa		0.23	□□□□□ -2.37
RAP1B-231	ENST00000544639	CCL4L1	Q8NHW4	92 aa		0.23	□□□□□ -2.37
RAP1B-231	ENST00000544639	OR4C12	Q96R67	309 aa		0.23	□□□□□ -2.37
RAP1B-231	ENST00000544639	EFCAB11	Q9BUY7	163 aa		0.23	□□□□□ -2.37
RAP1B-231	ENST00000544639	TAF9B	Q9HBM6	251 aa		0.23	□□□□□ -2.37
RAP1B-231	ENST00000544639	IL20	Q9NYY1	176 aa		0.23	□□□□□ -2.37
RAP1B-231	ENST00000544639	PIK3C2A	O00443	1686 aa		0.23	□□□□□ -2.37
RAP1B-231	ENST00000544639		H3BQV1	296 aa		0.22	□□□□□ -2.37
RAP1B-231	ENST00000544639	KPNA4	O00629	521 aa	Predicted RBP	0.22	□□□□□ -2.37
RAP1B-231	ENST00000544639	IGHV3-30	P01768	117 aa		0.22	□□□□□ -2.37
RAP1B-231	ENST00000544639	MT-ND6	P03923	174 aa		0.22	□□□□□ -2.37
RAP1B-231	ENST00000544639	IGHV3-30-5	P0DP03	117 aa		0.22	□□□□□ -2.37
RAP1B-231	ENST00000544639	TCTA	P57738	103 aa		0.22	□□□□□ -2.37
RAP1B-231	ENST00000544639	MRPS36	P82909	103 aa	Known RBP	0.22	□□□□□ -2.37
RAP1B-231	ENST00000544639	PRR15	Q8IV56	129 aa		0.22	□□□□□ -2.37
RAP1B-231	ENST00000544639	STX19	Q8N4C7	294 aa		0.22	□□□□□ -2.37
RAP1B-231	ENST00000544639	BORCS8	Q96FH0	119 aa		0.22	□□□□□ -2.37
RAP1B-231	ENST00000544639	MCEE	Q96PE7	176 aa		0.22	□□□□□ -2.37
RAP1B-231	ENST00000544639	LAMTOR3	Q9UHA4	124 aa		0.22	□□□□□ -2.37
RAP1B-231	ENST00000544639	FABP4	P15090	132 aa		0.21	□□□□□ -2.38
RAP1B-231	ENST00000544639	CROCCP2	Q86T23	111 aa		0.21	□□□□□ -2.38
RAP1B-231	ENST00000544639	DIRC1	Q969H9	104 aa		0.21	□□□□□ -2.38

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