RNA–Protein interactions for RNA: ENST00000544622.4

YBX3-216, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-216ENST00000544622 IGHV3OR16-12A0A075B7B8 117 aa8.16□□□□□ -1.1
YBX3-216ENST00000544622 C17orf112F2Z3M2 114 aa8.16□□□□□ -1.1
YBX3-216ENST00000544622 BOLA2-SMG1P6H3BVE0 249 aa8.16□□□□□ -1.1
YBX3-216ENST00000544622 PRB4P10163 310 aaPredicted RBP8.16□□□□□ -1.1
YBX3-216ENST00000544622 TCTAP57738 103 aa8.16□□□□□ -1.1
YBX3-216ENST00000544622 BAP18Q8IXM2 172 aa8.16□□□□□ -1.1
YBX3-216ENST00000544622 C2CD4CQ8TF44 421 aa8.16□□□□□ -1.1
YBX3-216ENST00000544622 ASB13Q8WXK3 278 aa8.16□□□□□ -1.1
YBX3-216ENST00000544622 ZNF503Q96F45 646 aa8.16□□□□□ -1.1
YBX3-216ENST00000544622 MRPL32Q9BYC8 188 aaKnown RBP8.16□□□□□ -1.1
YBX3-216ENST00000544622 DKK2Q9UBU2 259 aa8.16□□□□□ -1.1
YBX3-216ENST00000544622 FUT9Q9Y231 359 aa8.16□□□□□ -1.1
YBX3-216ENST00000544622 PLAC8L1A1L4L8 177 aa8.15□□□□□ -1.1
YBX3-216ENST00000544622 NPIPB6E9PJ23 425 aa8.15□□□□□ -1.1
YBX3-216ENST00000544622 M0R3E3 92 aa8.15□□□□□ -1.1
YBX3-216ENST00000544622 HBE1P02100 147 aa8.15□□□□□ -1.1
YBX3-216ENST00000544622 PRM2P04554 102 aa8.15□□□□□ -1.1
YBX3-216ENST00000544622 SPART-AS1P0CW21 52 aa8.15□□□□□ -1.1
YBX3-216ENST00000544622 TSPOP30536 169 aa8.15□□□□□ -1.1
YBX3-216ENST00000544622 CDKN1BP46527 198 aa8.15□□□□□ -1.1
YBX3-216ENST00000544622 KIR3DS1Q14943 382 aa8.15□□□□□ -1.1
YBX3-216ENST00000544622 RRN3P1Q2M238 152 aa8.15□□□□□ -1.1
YBX3-216ENST00000544622 RGS21Q2M5E4 152 aa8.15□□□□□ -1.1
YBX3-216ENST00000544622 FXYD5Q96DB9 178 aa8.15□□□□□ -1.1
YBX3-216ENST00000544622 AQP10Q96PS8 301 aa8.15□□□□□ -1.1
YBX3-216ENST00000544622 SMIM3Q9BZL3 60 aa8.15□□□□□ -1.1
YBX3-216ENST00000544622 OR51M1Q9H341 326 aa8.15□□□□□ -1.1
YBX3-216ENST00000544622 APLNQ9ULZ1 77 aa8.15□□□□□ -1.1
YBX3-216ENST00000544622 FRAS1Q86XX4 4008 aa8.15□□□□□ -1.11
YBX3-216ENST00000544622 TRAV10A0A0B4J240 114 aa8.14□□□□□ -1.11
YBX3-216ENST00000544622 LOC102723971A0A1B0GUV8 181 aa8.14□□□□□ -1.11
YBX3-216ENST00000544622 G3V3Q6 166 aa8.14□□□□□ -1.11
YBX3-216ENST00000544622 INSP01308 110 aa8.14□□□□□ -1.11
YBX3-216ENST00000544622 IFNA5P01569 189 aa8.14□□□□□ -1.11
YBX3-216ENST00000544622 GIPP09681 153 aaPredicted RBP8.14□□□□□ -1.11
YBX3-216ENST00000544622 NBEAP1P0C6P0 100 aa8.14□□□□□ -1.11
YBX3-216ENST00000544622 CT45A10P0DMU9 189 aa8.14□□□□□ -1.11
YBX3-216ENST00000544622 RHOBP62745 196 aa8.14□□□□□ -1.11
YBX3-216ENST00000544622 FAM222AQ5U5X8 452 aa8.14□□□□□ -1.11
YBX3-216ENST00000544622 LGALS9CQ6DKI2 356 aa8.14□□□□□ -1.11
YBX3-216ENST00000544622 ZNF767PQ75MW2 155 aa8.14□□□□□ -1.11
YBX3-216ENST00000544622 TMEM256Q8N2U0 113 aa8.14□□□□□ -1.11
YBX3-216ENST00000544622 RPP25LQ8N5L8 163 aaKnown RBP8.14□□□□□ -1.11
YBX3-216ENST00000544622 OR10J6PQ8NGY7 276 aa8.14□□□□□ -1.11
YBX3-216ENST00000544622 FAM19A4Q96LR4 140 aa8.14□□□□□ -1.11
YBX3-216ENST00000544622 ODF3Q96PU9 254 aa8.14□□□□□ -1.11
YBX3-216ENST00000544622 DNAH10Q8IVF4 4471 aa8.14□□□□□ -1.11
YBX3-216ENST00000544622 LY6G6CO95867 125 aa8.13□□□□□ -1.11
YBX3-216ENST00000544622 AZU1P20160 251 aa8.13□□□□□ -1.11
YBX3-216ENST00000544622 EMP1P54849 157 aa8.13□□□□□ -1.11
YBX3-216ENST00000544622 TAS2R60P59551 318 aa8.13□□□□□ -1.11
YBX3-216ENST00000544622 FFAR4Q5NUL3 377 aa8.13□□□□□ -1.11
YBX3-216ENST00000544622 EXOC3-AS1Q8N2X6 119 aa8.13□□□□□ -1.11
YBX3-216ENST00000544622 SCGB1C1Q8TD33 95 aa8.13□□□□□ -1.11
YBX3-216ENST00000544622 RNF141Q8WVD5 230 aa8.13□□□□□ -1.11
YBX3-216ENST00000544622 C20orf144Q9BQM9 153 aa8.13□□□□□ -1.11
YBX3-216ENST00000544622 PAXXQ9BUH6 204 aa8.13□□□□□ -1.11
YBX3-216ENST00000544622 PLA2G2EQ9NZK7 142 aa8.13□□□□□ -1.11
YBX3-216ENST00000544622 PRELID1Q9Y255 219 aa8.13□□□□□ -1.11
YBX3-216ENST00000544622 YTHDF2Q9Y5A9 579 aaKnown RBP8.13□□□□□ -1.11
YBX3-216ENST00000544622 TIMM9Q9Y5J7 89 aa8.13□□□□□ -1.11
YBX3-216ENST00000544622 DEFB131BA0A096LNP1 70 aa8.12□□□□□ -1.11
YBX3-216ENST00000544622 TEX48A0A1B0GUV7 120 aa8.12□□□□□ -1.11
YBX3-216ENST00000544622 RNF222A6NCQ9 220 aa8.12□□□□□ -1.11
YBX3-216ENST00000544622 ZNF705GA8MUZ8 300 aaPredicted RBP8.12□□□□□ -1.11
YBX3-216ENST00000544622 IGLL5B9A064 214 aa8.12□□□□□ -1.11
YBX3-216ENST00000544622 M6PRP20645 277 aa8.12□□□□□ -1.11
YBX3-216ENST00000544622 GFI1BQ5VTD9 330 aa8.12□□□□□ -1.11
YBX3-216ENST00000544622 C9orf47Q6ZRZ4 202 aa8.12□□□□□ -1.11
YBX3-216ENST00000544622 LYPD1Q8N2G4 141 aa8.12□□□□□ -1.11
YBX3-216ENST00000544622 BLNKQ8WV28 456 aa8.12□□□□□ -1.11
YBX3-216ENST00000544622 NIPSNAP3BQ9BS92 247 aa8.12□□□□□ -1.11
YBX3-216ENST00000544622 TMEM208Q9BTX3 173 aa8.12□□□□□ -1.11
YBX3-216ENST00000544622 AGPAT4-IT1Q9H0P7 198 aa8.12□□□□□ -1.11
YBX3-216ENST00000544622 PPP1R14DQ9NXH3 145 aa8.12□□□□□ -1.11
YBX3-216ENST00000544622 IGHV4-4A0A075B6R2 117 aa8.11□□□□□ -1.11
YBX3-216ENST00000544622 H7BYZ3 331 aa8.11□□□□□ -1.11
YBX3-216ENST00000544622 ZNF324O75467 553 aaPredicted RBP8.11□□□□□ -1.11
YBX3-216ENST00000544622 OR10J4P0C629 311 aa8.11□□□□□ -1.11
YBX3-216ENST00000544622 ZNF266Q14584 549 aa8.11□□□□□ -1.11
YBX3-216ENST00000544622 ICAM4Q14773 271 aa8.11□□□□□ -1.11
YBX3-216ENST00000544622 OR2G3Q8NGZ4 309 aa8.11□□□□□ -1.11
YBX3-216ENST00000544622 RNASE8Q8TDE3 154 aaKnown RBP8.11□□□□□ -1.11
YBX3-216ENST00000544622 PHYHIPLQ96FC7 376 aa8.11□□□□□ -1.11
YBX3-216ENST00000544622 LINC00477Q96M19 166 aa8.11□□□□□ -1.11
YBX3-216ENST00000544622 LINC01587Q99440 93 aa8.11□□□□□ -1.11
YBX3-216ENST00000544622 AAMDCQ9H7C9 122 aa8.11□□□□□ -1.11
YBX3-216ENST00000544622 TNFSF18Q9UNG2 199 aa8.11□□□□□ -1.11
YBX3-216ENST00000544622 LYRM9A8MSI8 78 aa8.1□□□□□ -1.11
YBX3-216ENST00000544622 KLLNB2CW77 178 aa8.1□□□□□ -1.11
YBX3-216ENST00000544622 CRISP2P16562 243 aa8.1□□□□□ -1.11
YBX3-216ENST00000544622 ERCC8Q13216 396 aa8.1□□□□□ -1.11
YBX3-216ENST00000544622 ZNF493Q6ZR52 646 aa8.1□□□□□ -1.11
YBX3-216ENST00000544622 OR2T35Q8NGX2 323 aa8.1□□□□□ -1.11
YBX3-216ENST00000544622 PSMG3Q9BT73 122 aaPredicted RBP8.1□□□□□ -1.11
YBX3-216ENST00000544622 OR7C2O60412 319 aa8.09□□□□□ -1.11
YBX3-216ENST00000544622 EIF3GO75821 320 aaKnown RBP eCLIP8.09□□□□□ -1.11
YBX3-216ENST00000544622 NMBP08949 121 aa8.09□□□□□ -1.11
YBX3-216ENST00000544622 ATP6V0CP27449 155 aa8.09□□□□□ -1.11
YBX3-216ENST00000544622 LEPP41159 167 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms