RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 SELENOKQ9Y6D0 94 aa23.03■■□□□ 1.28
CCM2-219ENST00000544363 PGPEP1LA6NFU8 196 aa23.02■■□□□ 1.28
CCM2-219ENST00000544363 ISLRO14498 428 aa23.02■■□□□ 1.28
CCM2-219ENST00000544363 S100A9P06702 114 aaKnown RBP23.02■■□□□ 1.28
CCM2-219ENST00000544363 GNG4P50150 75 aa23.02■■□□□ 1.28
CCM2-219ENST00000544363 C16orf92Q96LL3 132 aa23.02■■□□□ 1.28
CCM2-219ENST00000544363 IGF2BP2-AS1Q96M15 143 aa23.02■■□□□ 1.28
CCM2-219ENST00000544363 CLEC5AQ9NY25 188 aa23.02■■□□□ 1.28
CCM2-219ENST00000544363 LY96Q9Y6Y9 160 aa23.02■■□□□ 1.28
CCM2-219ENST00000544363 UBE2G1P62253 170 aa23.01■■□□□ 1.27
CCM2-219ENST00000544363 LINC01551Q86U37 167 aa23.01■■□□□ 1.27
CCM2-219ENST00000544363 FMC1Q96HJ9 113 aa23.01■■□□□ 1.27
CCM2-219ENST00000544363 B4DEV8 164 aa23■■□□□ 1.27
CCM2-219ENST00000544363 SOCS3O14543 225 aa23■■□□□ 1.27
CCM2-219ENST00000544363 RNF182Q8N6D2 247 aa23■■□□□ 1.27
CCM2-219ENST00000544363 OCC1Q8TAD7 63 aa23■■□□□ 1.27
CCM2-219ENST00000544363 RPS10P5Q9NQ39 176 aa23■■□□□ 1.27
CCM2-219ENST00000544363 MLXQ9UH92 298 aa23■■□□□ 1.27
CCM2-219ENST00000544363 K7EQM0 130 aa23■■□□□ 1.27
CCM2-219ENST00000544363 LCN12Q6JVE5 192 aa23■■□□□ 1.27
CCM2-219ENST00000544363 NIPBLQ6KC79 2804 aaeCLIP23■■□□□ 1.271e-6■■■■■ 35.4
CCM2-219ENST00000544363 IGKV3-7A0A075B6H7 116 aa22.99■■□□□ 1.27
CCM2-219ENST00000544363 SERTM2A0A1B0GWG4 89 aa22.99■■□□□ 1.27
CCM2-219ENST00000544363 CSN3P07498 182 aa22.99■■□□□ 1.27
CCM2-219ENST00000544363 MRPL53Q96EL3 112 aaKnown RBP22.99■■□□□ 1.27
CCM2-219ENST00000544363 SGK494Q96LW2 274 aa22.99■■□□□ 1.27
CCM2-219ENST00000544363 AURKAIP1Q9NWT8 199 aaPredicted RBP22.99■■□□□ 1.27
CCM2-219ENST00000544363 ZNF705FA8MVS1 300 aaPredicted RBP22.97■■□□□ 1.27
CCM2-219ENST00000544363 TMEM75Q8N9X5 138 aa22.97■■□□□ 1.27
CCM2-219ENST00000544363 PRB4P10163 310 aaPredicted RBP22.97■■□□□ 1.27
CCM2-219ENST00000544363 PSG3Q16557 428 aa22.97■■□□□ 1.27
CCM2-219ENST00000544363 BAGE2Q86Y30 109 aa22.97■■□□□ 1.27
CCM2-219ENST00000544363 JMJD1CQ15652 2540 aa22.96■■□□□ 1.27
CCM2-219ENST00000544363 TRAV8-1A0A0A6YYK1 113 aa22.96■■□□□ 1.27
CCM2-219ENST00000544363 OVOL1O14753 267 aa22.96■■□□□ 1.27
CCM2-219ENST00000544363 IGLV2-11P01706 119 aa22.96■■□□□ 1.27
CCM2-219ENST00000544363 IGLV2-8P01709 118 aa22.96■■□□□ 1.27
CCM2-219ENST00000544363 SAMD13Q5VXD3 122 aa22.96■■□□□ 1.27
CCM2-219ENST00000544363 TRBV6-1A0A0K0K1D8 114 aa22.95■■□□□ 1.26
CCM2-219ENST00000544363 GBGT1Q8N5D6 347 aa22.95■■□□□ 1.26
CCM2-219ENST00000544363 DCANP1Q8TF63 244 aa22.95■■□□□ 1.26
CCM2-219ENST00000544363 ISOC2Q96AB3 205 aa22.95■■□□□ 1.26
CCM2-219ENST00000544363 MS4A6AQ9H2W1 248 aa22.95■■□□□ 1.26
CCM2-219ENST00000544363 TEP1Q99973 2627 aaKnown RBP22.95■■□□□ 1.26
CCM2-219ENST00000544363 K7EN84 100 aa22.94■■□□□ 1.26
CCM2-219ENST00000544363 A0A087WWC5 75 aa22.93■■□□□ 1.26
CCM2-219ENST00000544363 LTAP01374 205 aa22.93■■□□□ 1.26
CCM2-219ENST00000544363 FLI1Q01543 452 aaPredicted RBP22.93■■□□□ 1.26
CCM2-219ENST00000544363 C20orf173Q96LM9 149 aa22.93■■□□□ 1.26
CCM2-219ENST00000544363 IGKV2-40A0A087WW87 121 aaPredicted RBP22.93■■□□□ 1.26
CCM2-219ENST00000544363 IGKV2D-40P01614 121 aaPredicted RBP22.93■■□□□ 1.26
CCM2-219ENST00000544363 BTN1A1Q13410 526 aa22.93■■□□□ 1.26
CCM2-219ENST00000544363 Q86TA4 180 aa22.93■■□□□ 1.26
CCM2-219ENST00000544363 PRAC2D3DTV9 90 aa22.92■■□□□ 1.26
CCM2-219ENST00000544363 TSPAN4O14817 238 aa22.92■■□□□ 1.26
CCM2-219ENST00000544363 RNF212Q495C1 297 aa22.92■■□□□ 1.26
CCM2-219ENST00000544363 PRNTQ86SH4 94 aa22.92■■□□□ 1.26
CCM2-219ENST00000544363 SMIM12Q96EX1 92 aa22.92■■□□□ 1.26
CCM2-219ENST00000544363 PSG8Q9UQ74 426 aa22.92■■□□□ 1.26
CCM2-219ENST00000544363 ID1P41134 155 aa22.91■■□□□ 1.26
CCM2-219ENST00000544363 WFDC3Q8IUB2 231 aa22.91■■□□□ 1.26
CCM2-219ENST00000544363 NHLRC2Q8NBF2 726 aa22.91■■□□□ 1.26
CCM2-219ENST00000544363 DYNLRB2Q8TF09 96 aa22.91■■□□□ 1.26
CCM2-219ENST00000544363 CITED1Q99966 193 aa22.91■■□□□ 1.26
CCM2-219ENST00000544363 RBAKDNA6NC62 111 aa22.9■■□□□ 1.26
CCM2-219ENST00000544363 DNASE2O00115 360 aaPredicted RBP22.9■■□□□ 1.26
CCM2-219ENST00000544363 MT-ND4LP03901 98 aa22.9■■□□□ 1.26
CCM2-219ENST00000544363 KRTAP24-1Q3LI83 254 aa22.9■■□□□ 1.26
CCM2-219ENST00000544363 SIGLEC8Q9NYZ4 499 aa22.9■■□□□ 1.26
CCM2-219ENST00000544363 FBLL1A6NHQ2 334 aaKnown RBP22.9■■□□□ 1.26
CCM2-219ENST00000544363 GCGP01275 180 aa22.9■■□□□ 1.26
CCM2-219ENST00000544363 TMEM88Q6PEY1 159 aa22.9■■□□□ 1.26
CCM2-219ENST00000544363 ZNF738Q8NE65 137 aa22.9■■□□□ 1.26
CCM2-219ENST00000544363 MLST8Q9BVC4 326 aa22.9■■□□□ 1.26
CCM2-219ENST00000544363 MGST1P10620 155 aaKnown RBP22.89■■□□□ 1.25
CCM2-219ENST00000544363 OR5I1Q13606 314 aa22.89■■□□□ 1.25
CCM2-219ENST00000544363 DEFB114Q30KQ6 69 aa22.89■■□□□ 1.25
CCM2-219ENST00000544363 CBLN2Q8IUK8 224 aa22.89■■□□□ 1.25
CCM2-219ENST00000544363 MAST4O15021 2626 aa22.89■■□□□ 1.25
CCM2-219ENST00000544363 K7EQG2 157 aa22.88■■□□□ 1.25
CCM2-219ENST00000544363 TFPI2P48307 235 aa22.88■■□□□ 1.25
CCM2-219ENST00000544363 PAFAH1B2P68402 229 aa22.88■■□□□ 1.25
CCM2-219ENST00000544363 SFRP2Q96HF1 295 aa22.88■■□□□ 1.25
CCM2-219ENST00000544363 VGLL1Q99990 258 aa22.88■■□□□ 1.25
CCM2-219ENST00000544363 CTDSP1Q9GZU7 261 aa22.88■■□□□ 1.25
CCM2-219ENST00000544363 ZFP30Q9Y2G7 519 aa22.88■■□□□ 1.25
CCM2-219ENST00000544363 PRIMA1Q86XR5 153 aa22.87■■□□□ 1.25
CCM2-219ENST00000544363 ANAPC16Q96DE5 110 aa22.87■■□□□ 1.25
CCM2-219ENST00000544363 SMCO4Q9NRQ5 59 aa22.87■■□□□ 1.25
CCM2-219ENST00000544363 RBPMS2Q6ZRY4 209 aaKnown RBP22.86■■□□□ 1.25
CCM2-219ENST00000544363 TMEM183AQ8IXX5 376 aa22.86■■□□□ 1.25
CCM2-219ENST00000544363 TMEM242Q9NWH2 141 aa22.86■■□□□ 1.25
CCM2-219ENST00000544363 PF4P02776 101 aa22.85■■□□□ 1.25
CCM2-219ENST00000544363 TMEM61Q8N0U2 210 aa22.85■■□□□ 1.25
CCM2-219ENST00000544363 WNK1Q9H4A3 2382 aa22.85■■□□□ 1.25
CCM2-219ENST00000544363 ERCC8Q13216 396 aa22.84■■□□□ 1.25
CCM2-219ENST00000544363 FAM24BQ8N5W8 94 aa22.83■■□□□ 1.25
CCM2-219ENST00000544363 TRAV2A0A0B4J234 112 aa22.82■■□□□ 1.24
CCM2-219ENST00000544363 PPP1R2P9O14990 202 aa22.82■■□□□ 1.24
CCM2-219ENST00000544363 ERVFC1-1P60608 527 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms