RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 TRBV19A0A075B6N1 114 aa7.98□□□□□ -1.13
DDB1-222ENST00000543627 NUPR2A6NF83 97 aa7.98□□□□□ -1.13
DDB1-222ENST00000543627 ZNF705GA8MUZ8 300 aaPredicted RBP7.98□□□□□ -1.13
DDB1-222ENST00000543627 BOLA2-SMG1P6H3BVE0 249 aa7.98□□□□□ -1.13
DDB1-222ENST00000543627 M0R3E3 92 aa7.98□□□□□ -1.13
DDB1-222ENST00000543627 JTBO76095 146 aa7.98□□□□□ -1.13
DDB1-222ENST00000543627 INSP01308 110 aa7.98□□□□□ -1.13
DDB1-222ENST00000543627 RANP62826 216 aaKnown RBP7.98□□□□□ -1.13
DDB1-222ENST00000543627 ERCC8Q13216 396 aa7.98□□□□□ -1.13
DDB1-222ENST00000543627 ZNF266Q14584 549 aa7.98□□□□□ -1.13
DDB1-222ENST00000543627 RRN3P1Q2M238 152 aa7.98□□□□□ -1.13
DDB1-222ENST00000543627 AMTNQ6UX39 209 aa7.98□□□□□ -1.13
DDB1-222ENST00000543627 C1orf158Q8N1D5 194 aa7.98□□□□□ -1.13
DDB1-222ENST00000543627 IGF2BP2-AS1Q96M15 143 aa7.98□□□□□ -1.13
DDB1-222ENST00000543627 CLUHP3Q96NS8 147 aa7.98□□□□□ -1.13
DDB1-222ENST00000543627 TMEM14CQ9P0S9 112 aa7.98□□□□□ -1.13
DDB1-222ENST00000543627 ARPC5O15511 151 aa7.97□□□□□ -1.13
DDB1-222ENST00000543627 AMBPP02760 352 aa7.97□□□□□ -1.13
DDB1-222ENST00000543627 TAS2R45P59539 299 aa7.97□□□□□ -1.13
DDB1-222ENST00000543627 RAB2AP61019 212 aa7.97□□□□□ -1.13
DDB1-222ENST00000543627 UBE2L3P68036 154 aaKnown RBP7.97□□□□□ -1.13
DDB1-222ENST00000543627 ZNF705AQ6ZN79 300 aaPredicted RBP7.97□□□□□ -1.13
DDB1-222ENST00000543627 RPP25LQ8N5L8 163 aaKnown RBP7.97□□□□□ -1.13
DDB1-222ENST00000543627 OR10G4Q8NGN3 311 aa7.97□□□□□ -1.13
DDB1-222ENST00000543627 OR10G9Q8NGN4 311 aa7.97□□□□□ -1.13
DDB1-222ENST00000543627 OR10G7Q8NGN6 311 aa7.97□□□□□ -1.13
DDB1-222ENST00000543627 FAM167A-AS1Q96KT0 104 aa7.97□□□□□ -1.13
DDB1-222ENST00000543627 HYLS1Q96M11 299 aa7.97□□□□□ -1.13
DDB1-222ENST00000543627 AQP10Q96PS8 301 aa7.97□□□□□ -1.13
DDB1-222ENST00000543627 PLA2G2EQ9NZK7 142 aa7.97□□□□□ -1.13
DDB1-222ENST00000543627 RPH3ALQ9UNE2 315 aa7.97□□□□□ -1.13
DDB1-222ENST00000543627 CELA1Q9UNI1 258 aa7.97□□□□□ -1.13
DDB1-222ENST00000543627 BORCS7-ASMTA0A0B4J1R7 106 aa7.96□□□□□ -1.14
DDB1-222ENST00000543627 LOC102723971A0A1B0GUV8 181 aa7.96□□□□□ -1.14
DDB1-222ENST00000543627 SMIM9A6NGZ8 99 aa7.96□□□□□ -1.14
DDB1-222ENST00000543627 IGLL5B9A064 214 aa7.96□□□□□ -1.14
DDB1-222ENST00000543627 NDUFB4O95168 129 aa7.96□□□□□ -1.14
DDB1-222ENST00000543627 LY6G6CO95867 125 aa7.96□□□□□ -1.14
DDB1-222ENST00000543627 HTN3P15516 51 aa7.96□□□□□ -1.14
DDB1-222ENST00000543627 M6PRP20645 277 aa7.96□□□□□ -1.14
DDB1-222ENST00000543627 ATP6V0CP27449 155 aa7.96□□□□□ -1.14
DDB1-222ENST00000543627 CDKN1BP46527 198 aa7.96□□□□□ -1.14
DDB1-222ENST00000543627 KIR3DS1Q14943 382 aa7.96□□□□□ -1.14
DDB1-222ENST00000543627 KHDC3LQ587J8 217 aa7.96□□□□□ -1.14
DDB1-222ENST00000543627 Q6ZTC4 211 aa7.96□□□□□ -1.14
DDB1-222ENST00000543627 IQCF2Q8IXL9 164 aa7.96□□□□□ -1.14
DDB1-222ENST00000543627 ASB13Q8WXK3 278 aa7.96□□□□□ -1.14
DDB1-222ENST00000543627 FXYD5Q96DB9 178 aa7.96□□□□□ -1.14
DDB1-222ENST00000543627 STARD9Q9P2P6 4700 aa7.96□□□□□ -1.14
DDB1-222ENST00000543627 KMT2CQ8NEZ4 4911 aaKnown RBP7.95□□□□□ -1.14
DDB1-222ENST00000543627 IGKV2-40A0A087WW87 121 aaPredicted RBP7.95□□□□□ -1.14
DDB1-222ENST00000543627 CRXO43186 299 aaPredicted RBP7.95□□□□□ -1.14
DDB1-222ENST00000543627 ZNF253O75346 499 aa7.95□□□□□ -1.14
DDB1-222ENST00000543627 IGKV2D-40P01614 121 aaPredicted RBP7.95□□□□□ -1.14
DDB1-222ENST00000543627 SPART-AS1P0CW21 52 aa7.95□□□□□ -1.14
DDB1-222ENST00000543627 CT45A10P0DMU9 189 aa7.95□□□□□ -1.14
DDB1-222ENST00000543627 TSPOP30536 169 aa7.95□□□□□ -1.14
DDB1-222ENST00000543627 CSN1S1P47710 185 aa7.95□□□□□ -1.14
DDB1-222ENST00000543627 RPL7L1Q6DKI1 246 aaKnown RBP7.95□□□□□ -1.14
DDB1-222ENST00000543627 C2CD4CQ8TF44 421 aa7.95□□□□□ -1.14
DDB1-222ENST00000543627 PHYHIPLQ96FC7 376 aa7.95□□□□□ -1.14
DDB1-222ENST00000543627 SH3BGRL3Q9H299 93 aa7.95□□□□□ -1.14
DDB1-222ENST00000543627 TNFSF18Q9UNG2 199 aa7.95□□□□□ -1.14
DDB1-222ENST00000543627 PRELID1Q9Y255 219 aa7.95□□□□□ -1.14
DDB1-222ENST00000543627 CSMD3Q7Z407 3707 aa7.94□□□□□ -1.14
DDB1-222ENST00000543627 TENM2Q9NT68 2774 aa7.94□□□□□ -1.14
DDB1-222ENST00000543627 TRAV12-3A0A0B4J271 114 aa7.94□□□□□ -1.14
DDB1-222ENST00000543627 LCE6AA0A183 80 aa7.94□□□□□ -1.14
DDB1-222ENST00000543627 TMEM189A5PLL7 270 aa7.94□□□□□ -1.14
DDB1-222ENST00000543627 A8MTW9 85 aa7.94□□□□□ -1.14
DDB1-222ENST00000543627 AZU1P20160 251 aa7.94□□□□□ -1.14
DDB1-222ENST00000543627 LEPP41159 167 aa7.94□□□□□ -1.14
DDB1-222ENST00000543627 CDC34P49427 236 aaPredicted RBP7.94□□□□□ -1.14
DDB1-222ENST00000543627 PDE6HQ13956 83 aa7.94□□□□□ -1.14
DDB1-222ENST00000543627 C12orf74Q32Q52 190 aa7.94□□□□□ -1.14
DDB1-222ENST00000543627 FAM222AQ5U5X8 452 aa7.94□□□□□ -1.14
DDB1-222ENST00000543627 OR2G3Q8NGZ4 309 aa7.94□□□□□ -1.14
DDB1-222ENST00000543627 ZNF503Q96F45 646 aa7.94□□□□□ -1.14
DDB1-222ENST00000543627 NEU1Q99519 415 aa7.94□□□□□ -1.14
DDB1-222ENST00000543627 Q9H3A6 140 aa7.94□□□□□ -1.14
DDB1-222ENST00000543627 YTHDF2Q9Y5A9 579 aaKnown RBP7.94□□□□□ -1.14
DDB1-222ENST00000543627 DEFB131BA0A096LNP1 70 aa7.93□□□□□ -1.14
DDB1-222ENST00000543627 TRAV10A0A0B4J240 114 aa7.93□□□□□ -1.14
DDB1-222ENST00000543627 RNF222A6NCQ9 220 aa7.93□□□□□ -1.14
DDB1-222ENST00000543627 PGPA6NDG6 321 aa7.93□□□□□ -1.14
DDB1-222ENST00000543627 RNASE4P34096 147 aaKnown RBP7.93□□□□□ -1.14
DDB1-222ENST00000543627 TMEM78Q5T7P6 136 aa7.93□□□□□ -1.14
DDB1-222ENST00000543627 GFI1BQ5VTD9 330 aa7.93□□□□□ -1.14
DDB1-222ENST00000543627 CMTM2Q8TAZ6 248 aa7.93□□□□□ -1.14
DDB1-222ENST00000543627 MRPL53Q96EL3 112 aaKnown RBP7.93□□□□□ -1.14
DDB1-222ENST00000543627 VGLL1Q99990 258 aa7.93□□□□□ -1.14
DDB1-222ENST00000543627 AGPAT4-IT1Q9H0P7 198 aa7.93□□□□□ -1.14
DDB1-222ENST00000543627 C11orf94C9JXX5 98 aa7.92□□□□□ -1.14
DDB1-222ENST00000543627 NPIPB6E9PJ23 425 aa7.92□□□□□ -1.14
DDB1-222ENST00000543627 MBP02144 154 aa7.92□□□□□ -1.14
DDB1-222ENST00000543627 GPX1P07203 203 aa7.92□□□□□ -1.14
DDB1-222ENST00000543627 DEFB130BP0DP73 79 aa7.92□□□□□ -1.14
DDB1-222ENST00000543627 DEFB130AP0DP74 79 aa7.92□□□□□ -1.14
DDB1-222ENST00000543627 DAD1P61803 113 aa7.92□□□□□ -1.14
DDB1-222ENST00000543627 CCDC28AQ8IWP9 274 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms