RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 SAV1Q9H4B6 383 aaPredicted RBP4.67□□□□□ -1.66
LTBR-212ENST00000543542 TMEM167BQ9NRX6 74 aa4.67□□□□□ -1.66
LTBR-212ENST00000543542 RPH3ALQ9UNE2 315 aa4.67□□□□□ -1.66
LTBR-212ENST00000543542 PRELID1Q9Y255 219 aa4.67□□□□□ -1.66
LTBR-212ENST00000543542 A0A0J9YX75 114 aa4.66□□□□□ -1.66
LTBR-212ENST00000543542 A0A1B0GV50 99 aa4.66□□□□□ -1.66
LTBR-212ENST00000543542 PGPA6NDG6 321 aa4.66□□□□□ -1.66
LTBR-212ENST00000543542 H3BMM0 161 aa4.66□□□□□ -1.66
LTBR-212ENST00000543542 TEX46H3BTG2 121 aa4.66□□□□□ -1.66
LTBR-212ENST00000543542 UBE2CO00762 179 aa4.66□□□□□ -1.66
LTBR-212ENST00000543542 NHLRC4P0CG21 123 aaPredicted RBP4.66□□□□□ -1.66
LTBR-212ENST00000543542 HLA-DRB4P13762 266 aa4.66□□□□□ -1.66
LTBR-212ENST00000543542 GCHFRP30047 84 aa4.66□□□□□ -1.66
LTBR-212ENST00000543542 FGF8P55075 233 aaPredicted RBP4.66□□□□□ -1.66
LTBR-212ENST00000543542 GDF5OSQ5U4N7 250 aa4.66□□□□□ -1.66
LTBR-212ENST00000543542 DPPA3Q6W0C5 159 aa4.66□□□□□ -1.66
LTBR-212ENST00000543542 TRPT1Q86TN4 253 aaKnown RBP4.66□□□□□ -1.66
LTBR-212ENST00000543542 LYPD1Q8N2G4 141 aa4.66□□□□□ -1.66
LTBR-212ENST00000543542 SFT2D1Q8WV19 159 aa4.66□□□□□ -1.66
LTBR-212ENST00000543542 SAT2Q96F10 170 aaPredicted RBP4.66□□□□□ -1.66
LTBR-212ENST00000543542 PHYHIPLQ96FC7 376 aa4.66□□□□□ -1.66
LTBR-212ENST00000543542 C1QTNF4Q9BXJ3 329 aa4.66□□□□□ -1.66
LTBR-212ENST00000543542 Q9H3A6 140 aa4.66□□□□□ -1.66
LTBR-212ENST00000543542 HLA-DRB4X5D2U9 266 aa4.66□□□□□ -1.66
LTBR-212ENST00000543542 NOTCH1P46531 2555 aa4.65□□□□□ -1.66
LTBR-212ENST00000543542 KIR2DL5BA0A0G2JN68 375 aa4.65□□□□□ -1.67
LTBR-212ENST00000543542 KIR2DL5BA0A0G2JPC4 375 aa4.65□□□□□ -1.67
LTBR-212ENST00000543542 M0R3E3 92 aa4.65□□□□□ -1.67
LTBR-212ENST00000543542 NDUFB4O95168 129 aa4.65□□□□□ -1.67
LTBR-212ENST00000543542 SLC25A5P05141 298 aaKnown RBP4.65□□□□□ -1.67
LTBR-212ENST00000543542 H2AFB1P0C5Y9 115 aa4.65□□□□□ -1.67
LTBR-212ENST00000543542 FHITP49789 147 aa4.65□□□□□ -1.67
LTBR-212ENST00000543542 RAB5CP51148 216 aa4.65□□□□□ -1.67
LTBR-212ENST00000543542 CNN1P51911 297 aaKnown RBP4.65□□□□□ -1.67
LTBR-212ENST00000543542 UBE2G2P60604 165 aa4.65□□□□□ -1.67
LTBR-212ENST00000543542 ZNF726P1Q15940 193 aa4.65□□□□□ -1.67
LTBR-212ENST00000543542 DEFB135Q30KP9 77 aa4.65□□□□□ -1.67
LTBR-212ENST00000543542 TMEM78Q5T7P6 136 aa4.65□□□□□ -1.67
LTBR-212ENST00000543542 LINC00322Q6ZN03 302 aaPredicted RBP4.65□□□□□ -1.67
LTBR-212ENST00000543542 SSX7Q7RTT5 188 aa4.65□□□□□ -1.67
LTBR-212ENST00000543542 KIR2DL5AQ8N109 375 aa4.65□□□□□ -1.67
LTBR-212ENST00000543542 OR8A1Q8NGG7 326 aa4.65□□□□□ -1.67
LTBR-212ENST00000543542 KIR2DL5BQ8NHK3 375 aa4.65□□□□□ -1.67
LTBR-212ENST00000543542 RXFP4Q8TDU9 374 aa4.65□□□□□ -1.67
LTBR-212ENST00000543542 MRPL53Q96EL3 112 aaKnown RBP4.65□□□□□ -1.67
LTBR-212ENST00000543542 ZNF503Q96F45 646 aa4.65□□□□□ -1.67
LTBR-212ENST00000543542 RCHY1Q96PM5 261 aa4.65□□□□□ -1.67
LTBR-212ENST00000543542 TMEM208Q9BTX3 173 aa4.65□□□□□ -1.67
LTBR-212ENST00000543542 RETNQ9HD89 108 aa4.65□□□□□ -1.67
LTBR-212ENST00000543542 OTORQ9NRC9 128 aa4.65□□□□□ -1.67
LTBR-212ENST00000543542 XCL2Q9UBD3 114 aa4.65□□□□□ -1.67
LTBR-212ENST00000543542 BOLA1Q9Y3E2 137 aa4.65□□□□□ -1.67
LTBR-212ENST00000543542 IGHV3OR16-12A0A075B7B8 117 aa4.64□□□□□ -1.67
LTBR-212ENST00000543542 ZNF705EA8MWA4 302 aaPredicted RBP4.64□□□□□ -1.67
LTBR-212ENST00000543542 PRAC2D3DTV9 90 aa4.64□□□□□ -1.67
LTBR-212ENST00000543542 BOLA2-SMG1P6H3BVE0 249 aa4.64□□□□□ -1.67
LTBR-212ENST00000543542 J3KRW8 73 aa4.64□□□□□ -1.67
LTBR-212ENST00000543542 K7EQM0 130 aa4.64□□□□□ -1.67
LTBR-212ENST00000543542 SPRY2O43597 315 aa4.64□□□□□ -1.67
LTBR-212ENST00000543542 IFNA7P01567 189 aa4.64□□□□□ -1.67
LTBR-212ENST00000543542 AMBPP02760 352 aa4.64□□□□□ -1.67
LTBR-212ENST00000543542 SULT1A2P50226 295 aa4.64□□□□□ -1.67
LTBR-212ENST00000543542 ERCC8Q13216 396 aa4.64□□□□□ -1.67
LTBR-212ENST00000543542 SPINK13Q1W4C9 94 aa4.64□□□□□ -1.67
LTBR-212ENST00000543542 CST9LP1Q5W188 147 aa4.64□□□□□ -1.67
LTBR-212ENST00000543542 ALKAL2Q6UX46 152 aa4.64□□□□□ -1.67
LTBR-212ENST00000543542 Q6ZWC4 215 aa4.64□□□□□ -1.67
LTBR-212ENST00000543542 SLC35B3Q9H1N7 401 aa4.64□□□□□ -1.67
LTBR-212ENST00000543542 TMPRSS5Q9H3S3 457 aa4.64□□□□□ -1.67
LTBR-212ENST00000543542 U3KQK5 164 aa4.64□□□□□ -1.67
LTBR-212ENST00000543542 IGKV2-40A0A087WW87 121 aaPredicted RBP4.63□□□□□ -1.67
LTBR-212ENST00000543542 M0R2Z0 102 aa4.63□□□□□ -1.67
LTBR-212ENST00000543542 INSP01308 110 aa4.63□□□□□ -1.67
LTBR-212ENST00000543542 IFNA1P01562 189 aa4.63□□□□□ -1.67
LTBR-212ENST00000543542 IGKV2D-40P01614 121 aaPredicted RBP4.63□□□□□ -1.67
LTBR-212ENST00000543542 HBE1P02100 147 aa4.63□□□□□ -1.67
LTBR-212ENST00000543542 TSPOP30536 169 aa4.63□□□□□ -1.67
LTBR-212ENST00000543542 LEPP41159 167 aa4.63□□□□□ -1.67
LTBR-212ENST00000543542 PPT1P50897 306 aa4.63□□□□□ -1.67
LTBR-212ENST00000543542 SUMO1P63165 101 aaKnown RBP4.63□□□□□ -1.67
LTBR-212ENST00000543542 GNG5P63218 68 aa4.63□□□□□ -1.67
LTBR-212ENST00000543542 GOLT1AQ6ZVE7 132 aa4.63□□□□□ -1.67
LTBR-212ENST00000543542 OR11H2Q8NH07 326 aa4.63□□□□□ -1.67
LTBR-212ENST00000543542 RNF183Q96D59 192 aa4.63□□□□□ -1.67
LTBR-212ENST00000543542 LINC00477Q96M19 166 aa4.63□□□□□ -1.67
LTBR-212ENST00000543542 RARRES2Q99969 163 aa4.63□□□□□ -1.67
LTBR-212ENST00000543542 TM2D3Q9BRN9 247 aa4.63□□□□□ -1.67
LTBR-212ENST00000543542 NKX6-2Q9C056 277 aaPredicted RBP4.63□□□□□ -1.67
LTBR-212ENST00000543542 PLA2G2EQ9NZK7 142 aa4.63□□□□□ -1.67
LTBR-212ENST00000543542 GOLT1BQ9Y3E0 138 aa4.63□□□□□ -1.67
LTBR-212ENST00000543542 AGRNO00468 2067 aa4.63□□□□□ -1.67
LTBR-212ENST00000543542 TRAV12-2A0A075B6T6 113 aa4.62□□□□□ -1.67
LTBR-212ENST00000543542 A0A1W2PRE2 83 aa4.62□□□□□ -1.67
LTBR-212ENST00000543542 DIRC3C9JPN6 131 aa4.62□□□□□ -1.67
LTBR-212ENST00000543542 NPIPB6E9PJ23 425 aa4.62□□□□□ -1.67
LTBR-212ENST00000543542 F6UZH7 168 aa4.62□□□□□ -1.67
LTBR-212ENST00000543542 PAGE4O60829 102 aa4.62□□□□□ -1.67
LTBR-212ENST00000543542 GPX1P07203 203 aa4.62□□□□□ -1.67
LTBR-212ENST00000543542 CDKN1BP46527 198 aa4.62□□□□□ -1.67
LTBR-212ENST00000543542 ZNF138P52744 262 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms