RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 PRAF2O60831 178 aa9.27□□□□□ -0.93
TNFRSF1A-215ENST00000543359 FGF7P21781 194 aa9.27□□□□□ -0.93
TNFRSF1A-215ENST00000543359 H2BFSP57053 126 aa9.27□□□□□ -0.93
TNFRSF1A-215ENST00000543359 RHOBP62745 196 aa9.27□□□□□ -0.93
TNFRSF1A-215ENST00000543359 BAXQ07812 192 aa9.27□□□□□ -0.93
TNFRSF1A-215ENST00000543359 GCSAMLQ5JQS6 135 aa9.27□□□□□ -0.93
TNFRSF1A-215ENST00000543359 POM121L12Q8N7R1 296 aa9.27□□□□□ -0.93
TNFRSF1A-215ENST00000543359 PFDN5Q99471 154 aa9.27□□□□□ -0.93
TNFRSF1A-215ENST00000543359 NPCDR1Q9BY65 106 aa9.27□□□□□ -0.93
TNFRSF1A-215ENST00000543359 LYRM9A8MSI8 78 aa9.26□□□□□ -0.93
TNFRSF1A-215ENST00000543359 E5RGE8 158 aa9.26□□□□□ -0.93
TNFRSF1A-215ENST00000543359 ZNF253O75346 499 aa9.26□□□□□ -0.93
TNFRSF1A-215ENST00000543359 NDUFB4O95168 129 aa9.26□□□□□ -0.93
TNFRSF1A-215ENST00000543359 CT45A10P0DMU9 189 aa9.26□□□□□ -0.93
TNFRSF1A-215ENST00000543359 CDKN1BP46527 198 aa9.26□□□□□ -0.93
TNFRSF1A-215ENST00000543359 GUK1Q16774 197 aa9.26□□□□□ -0.93
TNFRSF1A-215ENST00000543359 TMEM256Q8N2U0 113 aa9.26□□□□□ -0.93
TNFRSF1A-215ENST00000543359 OR5C1Q8NGR4 320 aa9.26□□□□□ -0.93
TNFRSF1A-215ENST00000543359 LINC01587Q99440 93 aa9.26□□□□□ -0.93
TNFRSF1A-215ENST00000543359 PARD6GQ9BYG4 376 aaPredicted RBP9.26□□□□□ -0.93
TNFRSF1A-215ENST00000543359 TMEM14CQ9P0S9 112 aa9.26□□□□□ -0.93
TNFRSF1A-215ENST00000543359 TRBV19A0A075B6N1 114 aa9.25□□□□□ -0.93
TNFRSF1A-215ENST00000543359 MPDU1O75352 247 aa9.25□□□□□ -0.93
TNFRSF1A-215ENST00000543359 P0DMU3 169 aa9.25□□□□□ -0.93
TNFRSF1A-215ENST00000543359 FAM231AP0DMU4 169 aa9.25□□□□□ -0.93
TNFRSF1A-215ENST00000543359 FAM231CP0DMU5 169 aa9.25□□□□□ -0.93
TNFRSF1A-215ENST00000543359 TAS2R60P59551 318 aa9.25□□□□□ -0.93
TNFRSF1A-215ENST00000543359 DAD1P61803 113 aa9.25□□□□□ -0.93
TNFRSF1A-215ENST00000543359 FCN2Q15485 313 aa9.25□□□□□ -0.93
TNFRSF1A-215ENST00000543359 FAM167A-AS1Q96KT0 104 aa9.25□□□□□ -0.93
TNFRSF1A-215ENST00000543359 KIAA1109Q2LD37 5005 aa9.25□□□□□ -0.93
TNFRSF1A-215ENST00000543359 NPIPB6E9PJ23 425 aa9.24□□□□□ -0.93
TNFRSF1A-215ENST00000543359 CYCSP99999 105 aaKnown RBP9.24□□□□□ -0.93
TNFRSF1A-215ENST00000543359 GFI1BQ5VTD9 330 aa9.24□□□□□ -0.93
TNFRSF1A-215ENST00000543359 TMEM88Q6PEY1 159 aa9.24□□□□□ -0.93
TNFRSF1A-215ENST00000543359 RNASE8Q8TDE3 154 aaKnown RBP9.24□□□□□ -0.93
TNFRSF1A-215ENST00000543359 PPP1R1CQ8WVI7 109 aa9.24□□□□□ -0.93
TNFRSF1A-215ENST00000543359 SLC25A31Q9H0C2 315 aa9.24□□□□□ -0.93
TNFRSF1A-215ENST00000543359 PPP1R14DQ9NXH3 145 aa9.24□□□□□ -0.93
TNFRSF1A-215ENST00000543359 NACAE9PAV3 2078 aa9.24□□□□□ -0.93
TNFRSF1A-215ENST00000543359 H7BYZ3 331 aa9.23□□□□□ -0.93
TNFRSF1A-215ENST00000543359 M0R3E3 92 aa9.23□□□□□ -0.93
TNFRSF1A-215ENST00000543359 RLN2P04090 185 aa9.23□□□□□ -0.93
TNFRSF1A-215ENST00000543359 PYYP10082 97 aa9.23□□□□□ -0.93
TNFRSF1A-215ENST00000543359 HIST1H1EP10412 219 aaKnown RBP9.23□□□□□ -0.93
TNFRSF1A-215ENST00000543359 HTN3P15516 51 aa9.23□□□□□ -0.93
TNFRSF1A-215ENST00000543359 LRRC37A5PQ49AS3 106 aa9.23□□□□□ -0.93
TNFRSF1A-215ENST00000543359 OR10J6PQ8NGY7 276 aa9.23□□□□□ -0.93
TNFRSF1A-215ENST00000543359 THAP6Q8TBB0 222 aa9.23□□□□□ -0.93
TNFRSF1A-215ENST00000543359 ODF3Q96PU9 254 aa9.23□□□□□ -0.93
TNFRSF1A-215ENST00000543359 C20orf144Q9BQM9 153 aa9.23□□□□□ -0.93
TNFRSF1A-215ENST00000543359 SLC25A2Q9BXI2 301 aa9.23□□□□□ -0.93
TNFRSF1A-215ENST00000543359 PDE6HQ13956 83 aa9.22□□□□□ -0.93
TNFRSF1A-215ENST00000543359 CLINT1Q14677 625 aa9.22□□□□□ -0.93
TNFRSF1A-215ENST00000543359 ZNF493Q6ZR52 646 aa9.22□□□□□ -0.93
TNFRSF1A-215ENST00000543359 MIR17HGQ75NE6 70 aa9.22□□□□□ -0.93
TNFRSF1A-215ENST00000543359 LINC00612Q8N6U2 182 aa9.22□□□□□ -0.93
TNFRSF1A-215ENST00000543359 MRPL53Q96EL3 112 aaKnown RBP9.22□□□□□ -0.93
TNFRSF1A-215ENST00000543359 C16orf74Q96GX8 76 aa9.22□□□□□ -0.93
TNFRSF1A-215ENST00000543359 FAM19A4Q96LR4 140 aa9.22□□□□□ -0.93
TNFRSF1A-215ENST00000543359 WDR61Q9GZS3 305 aaKnown RBP9.22□□□□□ -0.93
TNFRSF1A-215ENST00000543359 CBY3A6NI87 242 aa9.21□□□□□ -0.94
TNFRSF1A-215ENST00000543359 MPC2O95563 127 aa9.21□□□□□ -0.94
TNFRSF1A-215ENST00000543359 DEFB130BP0DP73 79 aa9.21□□□□□ -0.94
TNFRSF1A-215ENST00000543359 DEFB130AP0DP74 79 aa9.21□□□□□ -0.94
TNFRSF1A-215ENST00000543359 HTN1P15515 57 aa9.21□□□□□ -0.94
TNFRSF1A-215ENST00000543359 RNF212Q495C1 297 aa9.21□□□□□ -0.94
TNFRSF1A-215ENST00000543359 EXOC3-AS1Q8N2X6 119 aa9.21□□□□□ -0.94
TNFRSF1A-215ENST00000543359 TMEM263Q8WUH6 116 aaKnown RBP9.21□□□□□ -0.94
TNFRSF1A-215ENST00000543359 AGPAT4-IT1Q9H0P7 198 aa9.21□□□□□ -0.94
TNFRSF1A-215ENST00000543359 LRP1BQ9NZR2 4599 aa9.21□□□□□ -0.94
TNFRSF1A-215ENST00000543359 DEFA1P59665 94 aa9.2□□□□□ -0.94
TNFRSF1A-215ENST00000543359 DEFA3P59666 94 aa9.2□□□□□ -0.94
TNFRSF1A-215ENST00000543359 ERCC8Q13216 396 aa9.2□□□□□ -0.94
TNFRSF1A-215ENST00000543359 LGALS9BQ3B8N2 356 aa9.2□□□□□ -0.94
TNFRSF1A-215ENST00000543359 Q6ZR54 194 aa9.2□□□□□ -0.94
TNFRSF1A-215ENST00000543359 FXYD5Q96DB9 178 aa9.2□□□□□ -0.94
TNFRSF1A-215ENST00000543359 ZNF503Q96F45 646 aa9.2□□□□□ -0.94
TNFRSF1A-215ENST00000543359 BATF3Q9NR55 127 aa9.2□□□□□ -0.94
TNFRSF1A-215ENST00000543359 HSPB11Q9Y547 144 aa9.2□□□□□ -0.94
TNFRSF1A-215ENST00000543359 TIMM8BQ9Y5J9 83 aaPredicted RBP9.2□□□□□ -0.94
TNFRSF1A-215ENST00000543359 TRAV12-3A0A0B4J271 114 aa9.19□□□□□ -0.94
TNFRSF1A-215ENST00000543359 KLLNB2CW77 178 aa9.19□□□□□ -0.94
TNFRSF1A-215ENST00000543359 RTL8CO15255 209 aa9.19□□□□□ -0.94
TNFRSF1A-215ENST00000543359 SSNA1O43805 119 aa9.19□□□□□ -0.94
TNFRSF1A-215ENST00000543359 ZNF324O75467 553 aaPredicted RBP9.19□□□□□ -0.94
TNFRSF1A-215ENST00000543359 LEPP41159 167 aa9.19□□□□□ -0.94
TNFRSF1A-215ENST00000543359 C9orf47Q6ZRZ4 202 aa9.19□□□□□ -0.94
TNFRSF1A-215ENST00000543359 BLNKQ8WV28 456 aa9.19□□□□□ -0.94
TNFRSF1A-215ENST00000543359 ATP5SQ99766 215 aa9.19□□□□□ -0.94
TNFRSF1A-215ENST00000543359 NOP10Q9NPE3 64 aaKnown RBP9.19□□□□□ -0.94
TNFRSF1A-215ENST00000543359 PRELID1Q9Y255 219 aa9.19□□□□□ -0.94
TNFRSF1A-215ENST00000543359 TIMM9Q9Y5J7 89 aa9.19□□□□□ -0.94
TNFRSF1A-215ENST00000543359 A0A1B0GVY2 172 aa9.18□□□□□ -0.94
TNFRSF1A-215ENST00000543359 J3KRW8 73 aa9.18□□□□□ -0.94
TNFRSF1A-215ENST00000543359 M0R2N4 97 aa9.18□□□□□ -0.94
TNFRSF1A-215ENST00000543359 NBEAP1P0C6P0 100 aa9.18□□□□□ -0.94
TNFRSF1A-215ENST00000543359 CD300CQ08708 224 aa9.18□□□□□ -0.94
TNFRSF1A-215ENST00000543359 C15orf53Q8NAA6 179 aa9.18□□□□□ -0.94
TNFRSF1A-215ENST00000543359 LINC00477Q96M19 166 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms