RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 LYZL1Q6UWQ5 148 aa12.1□□□□□ -0.47
CNOT9-208ENST00000542068 IGKV2-40A0A087WW87 121 aaPredicted RBP12.1□□□□□ -0.47
CNOT9-208ENST00000542068 IGKV2D-40P01614 121 aaPredicted RBP12.1□□□□□ -0.47
CNOT9-208ENST00000542068 RIPPLY3P57055 190 aa12.1□□□□□ -0.47
CNOT9-208ENST00000542068 OCIAD2Q56VL3 154 aa12.1□□□□□ -0.47
CNOT9-208ENST00000542068 OR10AG1Q8NH19 301 aa12.1□□□□□ -0.47
CNOT9-208ENST00000542068 ZNF747Q9BV97 191 aa12.1□□□□□ -0.47
CNOT9-208ENST00000542068 K7EP13 123 aa12.09□□□□□ -0.47
CNOT9-208ENST00000542068 HAX1O00165 279 aa12.09□□□□□ -0.47
CNOT9-208ENST00000542068 CRXO43186 299 aaPredicted RBP12.09□□□□□ -0.47
CNOT9-208ENST00000542068 SAP30O75446 220 aa12.09□□□□□ -0.47
CNOT9-208ENST00000542068 IGHV3OR16-13A0A075B7E8 117 aa12.09□□□□□ -0.47
CNOT9-208ENST00000542068 IGHV3-74A0A0B4J1X5 117 aa12.09□□□□□ -0.47
CNOT9-208ENST00000542068 GAGE12BA1L429 117 aa12.09□□□□□ -0.47
CNOT9-208ENST00000542068 PPIFP30405 207 aaKnown RBP12.09□□□□□ -0.47
CNOT9-208ENST00000542068 CDKN1BP46527 198 aa12.09□□□□□ -0.47
CNOT9-208ENST00000542068 SOX21Q9Y651 276 aaPredicted RBP12.09□□□□□ -0.47
CNOT9-208ENST00000542068 FAM231BA6NCW3 169 aa12.08□□□□□ -0.47
CNOT9-208ENST00000542068 TEX22C9J3V5 150 aa12.08□□□□□ -0.47
CNOT9-208ENST00000542068 H3BUT2 72 aa12.08□□□□□ -0.47
CNOT9-208ENST00000542068 CT83Q5H943 113 aa12.08□□□□□ -0.47
CNOT9-208ENST00000542068 TIMD4Q96H15 378 aa12.08□□□□□ -0.47
CNOT9-208ENST00000542068 HIST1H1AQ02539 215 aaPredicted RBP12.08□□□□□ -0.48
CNOT9-208ENST00000542068 SAPCD1Q5SSQ6 148 aa12.08□□□□□ -0.48
CNOT9-208ENST00000542068 VKORC1Q9BQB6 163 aa12.08□□□□□ -0.48
CNOT9-208ENST00000542068 GAGE10A6NGK3 116 aa12.08□□□□□ -0.48
CNOT9-208ENST00000542068 INS-IGF2F8WCM5 200 aa12.08□□□□□ -0.48
CNOT9-208ENST00000542068 K7ENP7 123 aa12.08□□□□□ -0.48
CNOT9-208ENST00000542068 LY6DQ14210 128 aa12.08□□□□□ -0.48
CNOT9-208ENST00000542068 TMEM75Q8N9X5 138 aa12.08□□□□□ -0.48
CNOT9-208ENST00000542068 PRELID3AQ96N28 172 aa12.08□□□□□ -0.48
CNOT9-208ENST00000542068 TLN2Q9Y4G6 2542 aa12.07□□□□□ -0.48
CNOT9-208ENST00000542068 TRBV19A0A075B6N1 114 aa12.07□□□□□ -0.48
CNOT9-208ENST00000542068 K7EQM0 130 aa12.07□□□□□ -0.48
CNOT9-208ENST00000542068 TMEM11P17152 192 aa12.07□□□□□ -0.48
CNOT9-208ENST00000542068 RHOGP84095 191 aa12.07□□□□□ -0.48
CNOT9-208ENST00000542068 TMEM97Q5BJF2 176 aa12.07□□□□□ -0.48
CNOT9-208ENST00000542068 SIGLEC8Q9NYZ4 499 aa12.07□□□□□ -0.48
CNOT9-208ENST00000542068 GNG7O60262 68 aa12.07□□□□□ -0.48
CNOT9-208ENST00000542068 TTTY13Q9BZ97 58 aa12.07□□□□□ -0.48
CNOT9-208ENST00000542068 GFRA4Q9GZZ7 299 aa12.07□□□□□ -0.48
CNOT9-208ENST00000542068 RABAC1Q9UI14 185 aa12.07□□□□□ -0.48
CNOT9-208ENST00000542068 TMEM189A5PLL7 270 aa12.06□□□□□ -0.48
CNOT9-208ENST00000542068 HLA-DMBP28068 263 aa12.06□□□□□ -0.48
CNOT9-208ENST00000542068 TWIST1Q15672 202 aa12.06□□□□□ -0.48
CNOT9-208ENST00000542068 C2orf91Q6ZV80 131 aa12.06□□□□□ -0.48
CNOT9-208ENST00000542068 IGHV3OR16-10A0A075B7F0 116 aa12.06□□□□□ -0.48
CNOT9-208ENST00000542068 NPIPB5A8MRT5 1133 aa12.06□□□□□ -0.48
CNOT9-208ENST00000542068 K7EMI3 77 aa12.06□□□□□ -0.48
CNOT9-208ENST00000542068 DLX6P56179 175 aa12.06□□□□□ -0.48
CNOT9-208ENST00000542068 LINC01545Q5VT33 79 aa12.06□□□□□ -0.48
CNOT9-208ENST00000542068 RNF125Q96EQ8 232 aa12.06□□□□□ -0.48
CNOT9-208ENST00000542068 RAB1BQ9H0U4 201 aa12.06□□□□□ -0.48
CNOT9-208ENST00000542068 COX8AP10176 69 aa12.06□□□□□ -0.48
CNOT9-208ENST00000542068 CELSR1Q9NYQ6 3014 aa12.06□□□□□ -0.48
CNOT9-208ENST00000542068 I3L2K1 104 aa12.05□□□□□ -0.48
CNOT9-208ENST00000542068 CD5LO43866 347 aa12.05□□□□□ -0.48
CNOT9-208ENST00000542068 PCP2Q8IVA1 136 aa12.05□□□□□ -0.48
CNOT9-208ENST00000542068 NPIPB6E9PJ23 425 aa12.05□□□□□ -0.48
CNOT9-208ENST00000542068 CKS2P33552 79 aa12.05□□□□□ -0.48
CNOT9-208ENST00000542068 PSG3Q16557 428 aa12.05□□□□□ -0.48
CNOT9-208ENST00000542068 SIGLEC15Q6ZMC9 328 aa12.05□□□□□ -0.48
CNOT9-208ENST00000542068 LINC00311Q8N616 119 aa12.05□□□□□ -0.48
CNOT9-208ENST00000542068 SMIM12Q96EX1 92 aa12.05□□□□□ -0.48
CNOT9-208ENST00000542068 MEGF9Q9H1U4 602 aa12.05□□□□□ -0.48
CNOT9-208ENST00000542068 MSRB1Q9NZV6 116 aa12.05□□□□□ -0.48
CNOT9-208ENST00000542068 IGHV3-49A0A0A0MS15 119 aa12.05□□□□□ -0.48
CNOT9-208ENST00000542068 EVI2AP22794 236 aa12.05□□□□□ -0.48
CNOT9-208ENST00000542068 NBL1P41271 181 aa12.05□□□□□ -0.48
CNOT9-208ENST00000542068 UBTD1Q9HAC8 227 aa12.05□□□□□ -0.48
CNOT9-208ENST00000542068 PEF1Q9UBV8 284 aaKnown RBP12.05□□□□□ -0.48
CNOT9-208ENST00000542068 IGHV3-66A0A0C4DH42 116 aa12.04□□□□□ -0.48
CNOT9-208ENST00000542068 K7EIM0 57 aa12.04□□□□□ -0.48
CNOT9-208ENST00000542068 SH2D1AO60880 128 aa12.04□□□□□ -0.48
CNOT9-208ENST00000542068 SHANK2-AS3Q9BTD1 123 aa12.04□□□□□ -0.48
CNOT9-208ENST00000542068 AAMDCQ9H7C9 122 aa12.04□□□□□ -0.48
CNOT9-208ENST00000542068 DKK2Q9UBU2 259 aa12.04□□□□□ -0.48
CNOT9-208ENST00000542068 FBLL1A6NHQ2 334 aaKnown RBP12.03□□□□□ -0.48
CNOT9-208ENST00000542068 GAS8-AS1O95177 125 aa12.03□□□□□ -0.48
CNOT9-208ENST00000542068 ORM1P02763 201 aa12.03□□□□□ -0.48
CNOT9-208ENST00000542068 ZNF491Q8N8L2 437 aa12.03□□□□□ -0.48
CNOT9-208ENST00000542068 MS4A6AQ9H2W1 248 aa12.03□□□□□ -0.48
CNOT9-208ENST00000542068 DPM3Q9P2X0 92 aa12.03□□□□□ -0.48
CNOT9-208ENST00000542068 ECSCRQ19T08 205 aa12.03□□□□□ -0.48
CNOT9-208ENST00000542068 A0A096LNJ9 63 aa12.03□□□□□ -0.48
CNOT9-208ENST00000542068 IGLV1-47P01700 117 aa12.03□□□□□ -0.48
CNOT9-208ENST00000542068 KAAG1Q9UBP8 84 aa12.03□□□□□ -0.48
CNOT9-208ENST00000542068 PKD1L2Q7Z442 2459 aa12.02□□□□□ -0.48
CNOT9-208ENST00000542068 SETD2Q9BYW2 2564 aaPredicted RBP12.02□□□□□ -0.48
CNOT9-208ENST00000542068 NPYP01303 97 aa12.02□□□□□ -0.48
CNOT9-208ENST00000542068 ZNF414Q96IQ9 312 aa12.02□□□□□ -0.48
CNOT9-208ENST00000542068 JMJD8Q96S16 334 aa12.02□□□□□ -0.48
CNOT9-208ENST00000542068 HRNRQ86YZ3 2850 aaPredicted RBP12.02□□□□□ -0.48
CNOT9-208ENST00000542068 USP9XQ93008 2570 aaPredicted RBP12.02□□□□□ -0.49
CNOT9-208ENST00000542068 MRPL51Q4U2R6 128 aaKnown RBP12.02□□□□□ -0.49
CNOT9-208ENST00000542068 JKAMPQ9P055 326 aa12.02□□□□□ -0.49
CNOT9-208ENST00000542068 CRYGBP07316 175 aa12.01□□□□□ -0.49
CNOT9-208ENST00000542068 KIR3DS1Q14943 382 aa12.01□□□□□ -0.49
CNOT9-208ENST00000542068 ORMDL3Q8N138 153 aa12.01□□□□□ -0.49
CNOT9-208ENST00000542068 PIP4P2Q8N4L2 257 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms