RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 RNF222A6NCQ9 220 aa6.99□□□□□ -1.29
YBX3-212ENST00000542002 CXorf65A6NEN9 183 aa6.99□□□□□ -1.29
YBX3-212ENST00000542002 C17orf112F2Z3M2 114 aa6.99□□□□□ -1.29
YBX3-212ENST00000542002 M0R3E3 92 aa6.99□□□□□ -1.29
YBX3-212ENST00000542002 DUSP14O95147 198 aaKnown RBP6.99□□□□□ -1.29
YBX3-212ENST00000542002 OR10J4P0C629 311 aa6.99□□□□□ -1.29
YBX3-212ENST00000542002 HIST1H1EP10412 219 aaKnown RBP6.99□□□□□ -1.29
YBX3-212ENST00000542002 GUK1Q16774 197 aa6.99□□□□□ -1.29
YBX3-212ENST00000542002 CEMP1Q6PRD7 247 aaPredicted RBP6.99□□□□□ -1.29
YBX3-212ENST00000542002 BAP18Q8IXM2 172 aa6.99□□□□□ -1.29
YBX3-212ENST00000542002 OR2T35Q8NGX2 323 aa6.99□□□□□ -1.29
YBX3-212ENST00000542002 PHLDA1Q8WV24 401 aaPredicted RBP6.99□□□□□ -1.29
YBX3-212ENST00000542002 BLNKQ8WV28 456 aa6.99□□□□□ -1.29
YBX3-212ENST00000542002 NEU1Q99519 415 aa6.99□□□□□ -1.29
YBX3-212ENST00000542002 SLC50A1Q9BRV3 221 aa6.99□□□□□ -1.29
YBX3-212ENST00000542002 OR51M1Q9H341 326 aa6.99□□□□□ -1.29
YBX3-212ENST00000542002 TNFSF18Q9UNG2 199 aa6.99□□□□□ -1.29
YBX3-212ENST00000542002 FUT9Q9Y231 359 aa6.99□□□□□ -1.29
YBX3-212ENST00000542002 ZNF253O75346 499 aa6.98□□□□□ -1.29
YBX3-212ENST00000542002 NBEAP1P0C6P0 100 aa6.98□□□□□ -1.29
YBX3-212ENST00000542002 CT45A10P0DMU9 189 aa6.98□□□□□ -1.29
YBX3-212ENST00000542002 ERCC8Q13216 396 aa6.98□□□□□ -1.29
YBX3-212ENST00000542002 ZNF767PQ75MW2 155 aa6.98□□□□□ -1.29
YBX3-212ENST00000542002 RNF141Q8WVD5 230 aa6.98□□□□□ -1.29
YBX3-212ENST00000542002 ASB13Q8WXK3 278 aa6.98□□□□□ -1.29
YBX3-212ENST00000542002 IGF2BP2-AS1Q96M15 143 aa6.98□□□□□ -1.29
YBX3-212ENST00000542002 FXYD6-FXYD2A0A087WZ82 144 aa6.97□□□□□ -1.29
YBX3-212ENST00000542002 LCE6AA0A183 80 aa6.97□□□□□ -1.29
YBX3-212ENST00000542002 ZNF705GA8MUZ8 300 aaPredicted RBP6.97□□□□□ -1.29
YBX3-212ENST00000542002 AZU1P20160 251 aa6.97□□□□□ -1.29
YBX3-212ENST00000542002 EMP1P54849 157 aa6.97□□□□□ -1.29
YBX3-212ENST00000542002 RAB2AP61019 212 aa6.97□□□□□ -1.29
YBX3-212ENST00000542002 RHOBP62745 196 aa6.97□□□□□ -1.29
YBX3-212ENST00000542002 ICAM4Q14773 271 aa6.97□□□□□ -1.29
YBX3-212ENST00000542002 C12orf74Q32Q52 190 aa6.97□□□□□ -1.29
YBX3-212ENST00000542002 RPL7L1Q6DKI1 246 aaKnown RBP6.97□□□□□ -1.29
YBX3-212ENST00000542002 RPP25LQ8N5L8 163 aaKnown RBP6.97□□□□□ -1.29
YBX3-212ENST00000542002 HSD17B11Q8NBQ5 300 aa6.97□□□□□ -1.29
YBX3-212ENST00000542002 PAXXQ9BUH6 204 aa6.97□□□□□ -1.29
YBX3-212ENST00000542002 MRPL32Q9BYC8 188 aaKnown RBP6.97□□□□□ -1.29
YBX3-212ENST00000542002 SH3BGRL3Q9H299 93 aa6.97□□□□□ -1.29
YBX3-212ENST00000542002 TIMM9Q9Y5J7 89 aa6.97□□□□□ -1.29
YBX3-212ENST00000542002 ALMS1Q8TCU4 4167 aa6.97□□□□□ -1.29
YBX3-212ENST00000542002 KMT2AQ03164 3969 aa6.97□□□□□ -1.29
YBX3-212ENST00000542002 SMIM9A6NGZ8 99 aa6.96□□□□□ -1.3
YBX3-212ENST00000542002 NPIPB6E9PJ23 425 aa6.96□□□□□ -1.3
YBX3-212ENST00000542002 BOLA2-SMG1P6H3BVE0 249 aa6.96□□□□□ -1.3
YBX3-212ENST00000542002 HMGB3O15347 200 aaKnown RBP6.96□□□□□ -1.3
YBX3-212ENST00000542002 M6PRP20645 277 aa6.96□□□□□ -1.3
YBX3-212ENST00000542002 ATP6V0CP27449 155 aa6.96□□□□□ -1.3
YBX3-212ENST00000542002 PDE6HQ13956 83 aa6.96□□□□□ -1.3
YBX3-212ENST00000542002 Q6ZTC4 211 aa6.96□□□□□ -1.3
YBX3-212ENST00000542002 OR11H4Q8NGC9 324 aa6.96□□□□□ -1.3
YBX3-212ENST00000542002 PHYHIPLQ96FC7 376 aa6.96□□□□□ -1.3
YBX3-212ENST00000542002 VGLL1Q99990 258 aa6.96□□□□□ -1.3
YBX3-212ENST00000542002 AGPAT4-IT1Q9H0P7 198 aa6.96□□□□□ -1.3
YBX3-212ENST00000542002 CYTL1Q9NRR1 136 aa6.96□□□□□ -1.3
YBX3-212ENST00000542002 KCNIP2Q9NS61 270 aa6.96□□□□□ -1.3
YBX3-212ENST00000542002 GOLT1BQ9Y3E0 138 aa6.96□□□□□ -1.3
YBX3-212ENST00000542002 PLAC8L1A1L4L8 177 aa6.95□□□□□ -1.3
YBX3-212ENST00000542002 OR7C2O60412 319 aa6.95□□□□□ -1.3
YBX3-212ENST00000542002 RANP62826 216 aaKnown RBP6.95□□□□□ -1.3
YBX3-212ENST00000542002 ACOT6Q3I5F7 207 aaPredicted RBP6.95□□□□□ -1.3
YBX3-212ENST00000542002 FAM122CQ6P4D5 195 aa6.95□□□□□ -1.3
YBX3-212ENST00000542002 INO80EQ8NBZ0 244 aaPredicted RBP6.95□□□□□ -1.3
YBX3-212ENST00000542002 OR10G4Q8NGN3 311 aa6.95□□□□□ -1.3
YBX3-212ENST00000542002 OR10G9Q8NGN4 311 aa6.95□□□□□ -1.3
YBX3-212ENST00000542002 OR10G7Q8NGN6 311 aa6.95□□□□□ -1.3
YBX3-212ENST00000542002 OR10J6PQ8NGY7 276 aa6.95□□□□□ -1.3
YBX3-212ENST00000542002 OR2G3Q8NGZ4 309 aa6.95□□□□□ -1.3
YBX3-212ENST00000542002 MRPL53Q96EL3 112 aaKnown RBP6.95□□□□□ -1.3
YBX3-212ENST00000542002 FAM19A4Q96LR4 140 aa6.95□□□□□ -1.3
YBX3-212ENST00000542002 IGKV2-40A0A087WW87 121 aaPredicted RBP6.94□□□□□ -1.3
YBX3-212ENST00000542002 LOC102723971A0A1B0GUV8 181 aa6.94□□□□□ -1.3
YBX3-212ENST00000542002 NUPR2A6NF83 97 aa6.94□□□□□ -1.3
YBX3-212ENST00000542002 J3KRW8 73 aa6.94□□□□□ -1.3
YBX3-212ENST00000542002 ARPC5O15511 151 aa6.94□□□□□ -1.3
YBX3-212ENST00000542002 INSP01308 110 aa6.94□□□□□ -1.3
YBX3-212ENST00000542002 IGKV2D-40P01614 121 aaPredicted RBP6.94□□□□□ -1.3
YBX3-212ENST00000542002 AMBPP02760 352 aa6.94□□□□□ -1.3
YBX3-212ENST00000542002 CDKN1BP46527 198 aa6.94□□□□□ -1.3
YBX3-212ENST00000542002 ZNF266Q14584 549 aa6.94□□□□□ -1.3
YBX3-212ENST00000542002 GFI1BQ5VTD9 330 aa6.94□□□□□ -1.3
YBX3-212ENST00000542002 Q6ZQT7 251 aa6.94□□□□□ -1.3
YBX3-212ENST00000542002 SSX7Q7RTT5 188 aa6.94□□□□□ -1.3
YBX3-212ENST00000542002 LINC01587Q99440 93 aa6.94□□□□□ -1.3
YBX3-212ENST00000542002 PPP1R14DQ9NXH3 145 aa6.94□□□□□ -1.3
YBX3-212ENST00000542002 DKK2Q9UBU2 259 aa6.94□□□□□ -1.3
YBX3-212ENST00000542002 PRELID1Q9Y255 219 aa6.94□□□□□ -1.3
YBX3-212ENST00000542002 HBE1P02100 147 aa6.93□□□□□ -1.3
YBX3-212ENST00000542002 SPART-AS1P0CW21 52 aa6.93□□□□□ -1.3
YBX3-212ENST00000542002 HTN1P15515 57 aa6.93□□□□□ -1.3
YBX3-212ENST00000542002 CD300CQ08708 224 aa6.93□□□□□ -1.3
YBX3-212ENST00000542002 ZNF726P1Q15940 193 aa6.93□□□□□ -1.3
YBX3-212ENST00000542002 RRN3P1Q2M238 152 aa6.93□□□□□ -1.3
YBX3-212ENST00000542002 KHDC3LQ587J8 217 aa6.93□□□□□ -1.3
YBX3-212ENST00000542002 FAM222AQ5U5X8 452 aa6.93□□□□□ -1.3
YBX3-212ENST00000542002 C9orf47Q6ZRZ4 202 aa6.93□□□□□ -1.3
YBX3-212ENST00000542002 RAB24Q969Q5 203 aa6.93□□□□□ -1.3
YBX3-212ENST00000542002 PSMG3Q9BT73 122 aaPredicted RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms