RNA–Protein interactions for RNA: ENST00000541852.5

ITM2C-208, Transcript of integral membrane protein 2C, humanhuman

TSL 3

Gene ITM2C, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-208ENST00000541852 UPK3BQ9BT76 320 aa10.41□□□□□ -0.74
ITM2C-208ENST00000541852 TRAV26-1A0A087WT03 109 aa10.4□□□□□ -0.74
ITM2C-208ENST00000541852 ZNF253O75346 499 aa10.4□□□□□ -0.74
ITM2C-208ENST00000541852 MBPP02686 304 aaPredicted RBP10.4□□□□□ -0.74
ITM2C-208ENST00000541852 CAMLGP49069 296 aa10.4□□□□□ -0.74
ITM2C-208ENST00000541852 DAZ2Q13117 558 aaKnown RBP10.4□□□□□ -0.74
ITM2C-208ENST00000541852 PFDN5Q99471 154 aa10.4□□□□□ -0.74
ITM2C-208ENST00000541852 C20orf85Q9H1P6 137 aa10.4□□□□□ -0.74
ITM2C-208ENST00000541852 RCL1Q9Y2P8 373 aaKnown RBP10.4□□□□□ -0.74
ITM2C-208ENST00000541852 IGLC2P0DOY2 106 aa10.39□□□□□ -0.75
ITM2C-208ENST00000541852 ARL16Q0P5N6 197 aa10.39□□□□□ -0.75
ITM2C-208ENST00000541852 OPCMLQ14982 345 aa10.39□□□□□ -0.75
ITM2C-208ENST00000541852 GFI1BQ5VTD9 330 aa10.39□□□□□ -0.75
ITM2C-208ENST00000541852 MRPL53Q96EL3 112 aaKnown RBP10.39□□□□□ -0.75
ITM2C-208ENST00000541852 MGST2Q99735 147 aa10.39□□□□□ -0.75
ITM2C-208ENST00000541852 Q9H3A6 140 aa10.39□□□□□ -0.75
ITM2C-208ENST00000541852 PRELID1Q9Y255 219 aa10.39□□□□□ -0.75
ITM2C-208ENST00000541852 GAGE12BA1L429 117 aa10.38□□□□□ -0.75
ITM2C-208ENST00000541852 GAGE7O76087 117 aa10.38□□□□□ -0.75
ITM2C-208ENST00000541852 SLC25A5P05141 298 aaKnown RBP10.38□□□□□ -0.75
ITM2C-208ENST00000541852 GAGE12FP0CL80 117 aa10.38□□□□□ -0.75
ITM2C-208ENST00000541852 GAGE12GP0CL81 117 aa10.38□□□□□ -0.75
ITM2C-208ENST00000541852 GAGE12IP0CL82 117 aa10.38□□□□□ -0.75
ITM2C-208ENST00000541852 PVALBP20472 110 aaPredicted RBP10.38□□□□□ -0.75
ITM2C-208ENST00000541852 BCAP31P51572 246 aa10.38□□□□□ -0.75
ITM2C-208ENST00000541852 NRARPQ7Z6K4 114 aa10.38□□□□□ -0.75
ITM2C-208ENST00000541852 LINC00477Q96M19 166 aa10.38□□□□□ -0.75
ITM2C-208ENST00000541852 LINC00854A0A1B0GVQ3 168 aa10.37□□□□□ -0.75
ITM2C-208ENST00000541852 H3BQ15 152 aa10.37□□□□□ -0.75
ITM2C-208ENST00000541852 S100A11P31949 105 aa10.37□□□□□ -0.75
ITM2C-208ENST00000541852 RPL29P47914 159 aaKnown RBP10.37□□□□□ -0.75
ITM2C-208ENST00000541852 ZNF680Q8NEM1 530 aa10.37□□□□□ -0.75
ITM2C-208ENST00000541852 ZNF431Q8TF32 576 aaPredicted RBP10.37□□□□□ -0.75
ITM2C-208ENST00000541852 CHAC2Q8WUX2 184 aa10.37□□□□□ -0.75
ITM2C-208ENST00000541852 C18orf15Q96N68 181 aa10.37□□□□□ -0.75
ITM2C-208ENST00000541852 UQCC1Q9NVA1 299 aa10.37□□□□□ -0.75
ITM2C-208ENST00000541852 TRAV12-3A0A0B4J271 114 aa10.36□□□□□ -0.75
ITM2C-208ENST00000541852 PRAC2D3DTV9 90 aa10.36□□□□□ -0.75
ITM2C-208ENST00000541852 NPIPB6E9PJ23 425 aa10.36□□□□□ -0.75
ITM2C-208ENST00000541852 SLC17A3O00476 420 aa10.36□□□□□ -0.75
ITM2C-208ENST00000541852 SNRPCP09234 159 aaKnown RBP10.36□□□□□ -0.75
ITM2C-208ENST00000541852 CT45A10P0DMU9 189 aa10.36□□□□□ -0.75
ITM2C-208ENST00000541852 CAV2P51636 162 aa10.36□□□□□ -0.75
ITM2C-208ENST00000541852 ESRGQ1W209 222 aa10.36□□□□□ -0.75
ITM2C-208ENST00000541852 LINC00467Q9BRT7 94 aa10.36□□□□□ -0.75
ITM2C-208ENST00000541852 RBM38Q9H0Z9 239 aaKnown RBP10.36□□□□□ -0.75
ITM2C-208ENST00000541852 MRPS16Q9Y3D3 137 aaKnown RBP10.36□□□□□ -0.75
ITM2C-208ENST00000541852 A0A0J9YY99 117 aa10.35□□□□□ -0.75
ITM2C-208ENST00000541852 C5orf51A6NDU8 294 aa10.35□□□□□ -0.75
ITM2C-208ENST00000541852 NMBP08949 121 aa10.35□□□□□ -0.75
ITM2C-208ENST00000541852 BTCP35070 178 aa10.35□□□□□ -0.75
ITM2C-208ENST00000541852 HBG1P69891 147 aa10.35□□□□□ -0.75
ITM2C-208ENST00000541852 HBG2P69892 147 aa10.35□□□□□ -0.75
ITM2C-208ENST00000541852 PDE6HQ13956 83 aa10.35□□□□□ -0.75
ITM2C-208ENST00000541852 KIR3DS1Q14943 382 aa10.35□□□□□ -0.75
ITM2C-208ENST00000541852 ATP6V1FQ16864 119 aa10.35□□□□□ -0.75
ITM2C-208ENST00000541852 SPATA12Q7Z6I5 190 aa10.35□□□□□ -0.75
ITM2C-208ENST00000541852 MAPKAPK5-AS1Q8N8E1 139 aa10.35□□□□□ -0.75
ITM2C-208ENST00000541852 C2orf50Q96LR7 162 aa10.35□□□□□ -0.75
ITM2C-208ENST00000541852 KRTAP4-5Q9BYR2 181 aa10.35□□□□□ -0.75
ITM2C-208ENST00000541852 TMEM14CQ9P0S9 112 aa10.35□□□□□ -0.75
ITM2C-208ENST00000541852 WDR83OSQ9Y284 106 aa10.35□□□□□ -0.75
ITM2C-208ENST00000541852 LSM5Q9Y4Y9 91 aaKnown RBP10.35□□□□□ -0.75
ITM2C-208ENST00000541852 TRGV2A0A075B6R0 118 aa10.34□□□□□ -0.75
ITM2C-208ENST00000541852 FAM25EA8MYX2 175 aa10.34□□□□□ -0.75
ITM2C-208ENST00000541852 MPDU1O75352 247 aa10.34□□□□□ -0.75
ITM2C-208ENST00000541852 HIST1H1EP10412 219 aaKnown RBP10.34□□□□□ -0.75
ITM2C-208ENST00000541852 IL7P13232 177 aa10.34□□□□□ -0.75
ITM2C-208ENST00000541852 HOXA5P20719 270 aa10.34□□□□□ -0.75
ITM2C-208ENST00000541852 SLAQ13239 276 aa10.34□□□□□ -0.75
ITM2C-208ENST00000541852 VWC2Q2TAL6 325 aa10.34□□□□□ -0.75
ITM2C-208ENST00000541852 ANXA2RQ3ZCQ2 193 aa10.34□□□□□ -0.75
ITM2C-208ENST00000541852 MORN5Q5VZ52 161 aa10.34□□□□□ -0.75
ITM2C-208ENST00000541852 MIC13Q5XKP0 118 aa10.34□□□□□ -0.75
ITM2C-208ENST00000541852 SDHCQ99643 169 aaPredicted RBP10.34□□□□□ -0.75
ITM2C-208ENST00000541852 SLC39A9Q9NUM3 307 aa10.34□□□□□ -0.75
ITM2C-208ENST00000541852 TIMM9Q9Y5J7 89 aa10.34□□□□□ -0.75
ITM2C-208ENST00000541852 HSPG2P98160 4391 aa10.33□□□□□ -0.76
ITM2C-208ENST00000541852 TRBV19A0A075B6N1 114 aa10.33□□□□□ -0.76
ITM2C-208ENST00000541852 C7orf71A4D174 169 aa10.33□□□□□ -0.76
ITM2C-208ENST00000541852 H3BTX0 84 aa10.33□□□□□ -0.76
ITM2C-208ENST00000541852 CST7O76096 145 aa10.33□□□□□ -0.76
ITM2C-208ENST00000541852 SULT1A1P50225 295 aa10.33□□□□□ -0.76
ITM2C-208ENST00000541852 STX12Q86Y82 276 aa10.33□□□□□ -0.76
ITM2C-208ENST00000541852 Q8N1X5 172 aa10.33□□□□□ -0.76
ITM2C-208ENST00000541852 EIF4E3Q8N5X7 224 aaKnown RBP10.33□□□□□ -0.76
ITM2C-208ENST00000541852 PARD6GQ9BYG4 376 aaPredicted RBP10.33□□□□□ -0.76
ITM2C-208ENST00000541852 AAMDCQ9H7C9 122 aa10.33□□□□□ -0.76
ITM2C-208ENST00000541852 ZNF586Q9NXT0 402 aa10.33□□□□□ -0.76
ITM2C-208ENST00000541852 TRAV5A0A0B4J249 113 aa10.32□□□□□ -0.76
ITM2C-208ENST00000541852 KLLNB2CW77 178 aa10.32□□□□□ -0.76
ITM2C-208ENST00000541852 J3KRW8 73 aa10.32□□□□□ -0.76
ITM2C-208ENST00000541852 LYRM1O43325 122 aa10.32□□□□□ -0.76
ITM2C-208ENST00000541852 ZNF324O75467 553 aaPredicted RBP10.32□□□□□ -0.76
ITM2C-208ENST00000541852 TCRBP04435 133 aa10.32□□□□□ -0.76
ITM2C-208ENST00000541852 PRB4P10163 310 aaPredicted RBP10.32□□□□□ -0.76
ITM2C-208ENST00000541852 BAXQ07812 192 aa10.32□□□□□ -0.76
ITM2C-208ENST00000541852 Q6ZTI0 123 aa10.32□□□□□ -0.76
ITM2C-208ENST00000541852 LYRM2Q9NU23 88 aaPredicted RBP10.32□□□□□ -0.76
ITM2C-208ENST00000541852 FAM24AA6NFZ4 105 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms