RNA–Protein interactions for RNA: ENST00000541713.5

PTPN1-202, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

TSL 2 BASIC

Gene PTPN1, Length 3,469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-202ENST00000541713 FOXE3Q13461 319 aa10.64□□□□□ -0.71
PTPN1-202ENST00000541713 LY6EQ16553 131 aa10.64□□□□□ -0.71
PTPN1-202ENST00000541713 TM4SF20Q53R12 229 aa10.64□□□□□ -0.71
PTPN1-202ENST00000541713 CLEC19AQ6UXS0 136 aa10.64□□□□□ -0.71
PTPN1-202ENST00000541713 FA2HQ7L5A8 372 aa10.64□□□□□ -0.71
PTPN1-202ENST00000541713 A0A087X0K7 114 aa10.64□□□□□ -0.71
PTPN1-202ENST00000541713 A0A1B0GUT8 65 aa10.64□□□□□ -0.71
PTPN1-202ENST00000541713 CLEC3BP05452 202 aa10.64□□□□□ -0.71
PTPN1-202ENST00000541713 TSPOP30536 169 aa10.64□□□□□ -0.71
PTPN1-202ENST00000541713 C5orf64Q2M2E5 130 aa10.64□□□□□ -0.71
PTPN1-202ENST00000541713 COL5A1-AS1Q5SY13 56 aa10.64□□□□□ -0.71
PTPN1-202ENST00000541713 IGF2-ASQ6U949 168 aa10.64□□□□□ -0.71
PTPN1-202ENST00000541713 MLST8Q9BVC4 326 aa10.64□□□□□ -0.71
PTPN1-202ENST00000541713 OTORQ9NRC9 128 aa10.64□□□□□ -0.71
PTPN1-202ENST00000541713 D6R8Y8 96 aa10.64□□□□□ -0.71
PTPN1-202ENST00000541713 NUDT3O95989 172 aa10.64□□□□□ -0.71
PTPN1-202ENST00000541713 CRYGBP07316 175 aa10.64□□□□□ -0.71
PTPN1-202ENST00000541713 K7EQM0 130 aa10.63□□□□□ -0.71
PTPN1-202ENST00000541713 DLEU1O43261 78 aa10.63□□□□□ -0.71
PTPN1-202ENST00000541713 CSN1S1P47710 185 aa10.63□□□□□ -0.71
PTPN1-202ENST00000541713 EPG5Q9HCE0 2579 aa10.63□□□□□ -0.71
PTPN1-202ENST00000541713 GAS8-AS1O95177 125 aa10.63□□□□□ -0.71
PTPN1-202ENST00000541713 IGLV2-11P01706 119 aa10.63□□□□□ -0.71
PTPN1-202ENST00000541713 PTTG1IPP53801 180 aa10.63□□□□□ -0.71
PTPN1-202ENST00000541713 MFAP4P55083 255 aa10.63□□□□□ -0.71
PTPN1-202ENST00000541713 VAMP3Q15836 100 aa10.63□□□□□ -0.71
PTPN1-202ENST00000541713 TMEM189A5PLL7 270 aa10.63□□□□□ -0.71
PTPN1-202ENST00000541713 C2orf70A6NJV1 201 aa10.63□□□□□ -0.71
PTPN1-202ENST00000541713 PRAC2D3DTV9 90 aa10.63□□□□□ -0.71
PTPN1-202ENST00000541713 OR5AL1P0C617 328 aa10.63□□□□□ -0.71
PTPN1-202ENST00000541713 LBHQ53QV2 105 aaPredicted RBP10.63□□□□□ -0.71
PTPN1-202ENST00000541713 SHANK2-AS3Q9BTD1 123 aa10.63□□□□□ -0.71
PTPN1-202ENST00000541713 C1RLQ9NZP8 487 aa10.63□□□□□ -0.71
PTPN1-202ENST00000541713 NOTCH2Q04721 2471 aa10.62□□□□□ -0.71
PTPN1-202ENST00000541713 ESDP10768 282 aa10.62□□□□□ -0.71
PTPN1-202ENST00000541713 C15orf32Q32M92 178 aa10.62□□□□□ -0.71
PTPN1-202ENST00000541713 SIGLEC15Q6ZMC9 328 aa10.62□□□□□ -0.71
PTPN1-202ENST00000541713 FAM231DQ6ZW35 169 aa10.62□□□□□ -0.71
PTPN1-202ENST00000541713 KLHDC1Q8N7A1 406 aa10.62□□□□□ -0.71
PTPN1-202ENST00000541713 FANCD2OSQ96PS1 177 aa10.62□□□□□ -0.71
PTPN1-202ENST00000541713 NAV2Q8IVL1 2488 aa10.62□□□□□ -0.71
PTPN1-202ENST00000541713 IGHV3-11P01762 117 aa10.62□□□□□ -0.71
PTPN1-202ENST00000541713 GATA1P15976 413 aaPredicted RBP10.62□□□□□ -0.71
PTPN1-202ENST00000541713 CEACAM3P40198 252 aa10.62□□□□□ -0.71
PTPN1-202ENST00000541713 RNF151Q2KHN1 245 aa10.62□□□□□ -0.71
PTPN1-202ENST00000541713 CHODLQ9H9P2 273 aa10.62□□□□□ -0.71
PTPN1-202ENST00000541713 TRAV9-2A0A087WT02 112 aa10.61□□□□□ -0.71
PTPN1-202ENST00000541713 HSBP1L1C9JCN9 74 aa10.61□□□□□ -0.71
PTPN1-202ENST00000541713 ZNF414Q96IQ9 312 aa10.61□□□□□ -0.71
PTPN1-202ENST00000541713 C19orf71A6NCJ1 209 aa10.61□□□□□ -0.71
PTPN1-202ENST00000541713 SRD5A1P18405 259 aa10.61□□□□□ -0.71
PTPN1-202ENST00000541713 COX19Q49B96 90 aa10.61□□□□□ -0.71
PTPN1-202ENST00000541713 FAM71F2Q6NXP2 309 aa10.61□□□□□ -0.71
PTPN1-202ENST00000541713 BPESC1Q9GZL8 116 aa10.61□□□□□ -0.71
PTPN1-202ENST00000541713 ZNF462Q96JM2 2506 aa10.61□□□□□ -0.71
PTPN1-202ENST00000541713 SYS1-DBNDD2H3BUS1 97 aa10.61□□□□□ -0.71
PTPN1-202ENST00000541713 CTRLP40313 264 aa10.61□□□□□ -0.71
PTPN1-202ENST00000541713 ZNF80P51504 273 aaPredicted RBP10.61□□□□□ -0.71
PTPN1-202ENST00000541713 NHLH1Q02575 133 aa10.61□□□□□ -0.71
PTPN1-202ENST00000541713 GLMPQ8WWB7 406 aa10.61□□□□□ -0.71
PTPN1-202ENST00000541713 AP5S1Q9NUS5 200 aa10.61□□□□□ -0.71
PTPN1-202ENST00000541713 MRPL27Q9P0M9 148 aaKnown RBP10.61□□□□□ -0.71
PTPN1-202ENST00000541713 A0A1B0GXF2 115 aa10.6□□□□□ -0.71
PTPN1-202ENST00000541713 SH2D1AO60880 128 aa10.6□□□□□ -0.71
PTPN1-202ENST00000541713 PRSS57Q6UWY2 283 aa10.6□□□□□ -0.71
PTPN1-202ENST00000541713 PSG3Q16557 428 aa10.6□□□□□ -0.71
PTPN1-202ENST00000541713 MAP1LC3CQ9BXW4 147 aa10.6□□□□□ -0.71
PTPN1-202ENST00000541713 KLF12Q9Y4X4 402 aa10.6□□□□□ -0.71
PTPN1-202ENST00000541713 RHOGP84095 191 aa10.6□□□□□ -0.71
PTPN1-202ENST00000541713 UFC1Q9Y3C8 167 aa10.6□□□□□ -0.71
PTPN1-202ENST00000541713 K7EMI3 77 aa10.59□□□□□ -0.71
PTPN1-202ENST00000541713 NBL1P41271 181 aa10.59□□□□□ -0.71
PTPN1-202ENST00000541713 PRSS22Q9GZN4 317 aa10.59□□□□□ -0.71
PTPN1-202ENST00000541713 CKS2P33552 79 aa10.59□□□□□ -0.71
PTPN1-202ENST00000541713 RIGQ13278 110 aa10.59□□□□□ -0.71
PTPN1-202ENST00000541713 H3BRN7 92 aa10.59□□□□□ -0.71
PTPN1-202ENST00000541713 M0QZK8 103 aa10.59□□□□□ -0.71
PTPN1-202ENST00000541713 ATP6V0E1O15342 81 aa10.59□□□□□ -0.71
PTPN1-202ENST00000541713 EGR2P11161 476 aaPredicted RBP10.59□□□□□ -0.71
PTPN1-202ENST00000541713 TTTY13Q9BZ97 58 aa10.59□□□□□ -0.71
PTPN1-202ENST00000541713 C20orf202A1L168 122 aa10.58□□□□□ -0.72
PTPN1-202ENST00000541713 SAA4P35542 130 aa10.58□□□□□ -0.72
PTPN1-202ENST00000541713 CFHR4Q92496 578 aa10.58□□□□□ -0.72
PTPN1-202ENST00000541713 KLK15Q9H2R5 256 aa10.58□□□□□ -0.72
PTPN1-202ENST00000541713 RAB37Q96AX2 223 aa10.58□□□□□ -0.72
PTPN1-202ENST00000541713 PRELID3AQ96N28 172 aa10.58□□□□□ -0.72
PTPN1-202ENST00000541713 TRAV26-2A0A0B4J265 109 aa10.57□□□□□ -0.72
PTPN1-202ENST00000541713 NMUP48645 174 aa10.57□□□□□ -0.72
PTPN1-202ENST00000541713 INS-IGF2F8WCM5 200 aa10.57□□□□□ -0.72
PTPN1-202ENST00000541713 LY6LH3BQJ8 138 aa10.57□□□□□ -0.72
PTPN1-202ENST00000541713 CACNG7P62955 275 aa10.57□□□□□ -0.72
PTPN1-202ENST00000541713 TNFRSF14Q92956 283 aa10.57□□□□□ -0.72
PTPN1-202ENST00000541713 ABCA2Q9BZC7 2435 aa10.57□□□□□ -0.72
PTPN1-202ENST00000541713 CTSGP08311 255 aa10.57□□□□□ -0.72
PTPN1-202ENST00000541713 PRTN3P24158 256 aa10.57□□□□□ -0.72
PTPN1-202ENST00000541713 RABAC1Q9UI14 185 aa10.57□□□□□ -0.72
PTPN1-202ENST00000541713 NACAE9PAV3 2078 aa10.57□□□□□ -0.72
PTPN1-202ENST00000541713 MTORP42345 2549 aa10.57□□□□□ -0.72
PTPN1-202ENST00000541713 IL17RELQ6ZVW7 336 aa10.56□□□□□ -0.72
PTPN1-202ENST00000541713 MAPK1IP1LQ8NDC0 245 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms