RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 LAMTOR2Q9Y2Q5 125 aa11.79□□□□□ -0.52
VARS2-211ENST00000541562 GOLT1BQ9Y3E0 138 aa11.79□□□□□ -0.52
VARS2-211ENST00000541562 OR10J3Q5JRS4 329 aa11.78□□□□□ -0.52
VARS2-211ENST00000541562 LINC00311Q8N616 119 aa11.78□□□□□ -0.52
VARS2-211ENST00000541562 C21orf62Q9NYP8 219 aa11.78□□□□□ -0.52
VARS2-211ENST00000541562 KAAG1Q9UBP8 84 aa11.78□□□□□ -0.52
VARS2-211ENST00000541562 D6R8Y8 96 aa11.78□□□□□ -0.52
VARS2-211ENST00000541562 FNDC10F2Z333 226 aa11.78□□□□□ -0.52
VARS2-211ENST00000541562 LINC00614P0C842 121 aa11.78□□□□□ -0.52
VARS2-211ENST00000541562 C5orf64Q2M2E5 130 aa11.78□□□□□ -0.52
VARS2-211ENST00000541562 MPV17L2Q567V2 206 aa11.78□□□□□ -0.52
VARS2-211ENST00000541562 PRSS57Q6UWY2 283 aa11.78□□□□□ -0.52
VARS2-211ENST00000541562 COL25A1Q9BXS0 654 aaPredicted RBP11.78□□□□□ -0.52
VARS2-211ENST00000541562 ANKRD17O75179 2603 aaKnown RBP11.78□□□□□ -0.52
VARS2-211ENST00000541562 TRBV19A0A075B6N1 114 aa11.78□□□□□ -0.52
VARS2-211ENST00000541562 TOMM40O96008 361 aa11.78□□□□□ -0.52
VARS2-211ENST00000541562 C15orf32Q32M92 178 aa11.78□□□□□ -0.52
VARS2-211ENST00000541562 OR4B1Q8NGF8 309 aa11.78□□□□□ -0.52
VARS2-211ENST00000541562 C7orf69Q9H7B7 122 aa11.78□□□□□ -0.52
VARS2-211ENST00000541562 AAMDCQ9H7C9 122 aa11.78□□□□□ -0.52
VARS2-211ENST00000541562 C1RLQ9NZP8 487 aa11.78□□□□□ -0.52
VARS2-211ENST00000541562 TRBV9A0A0B4J1U6 114 aa11.77□□□□□ -0.52
VARS2-211ENST00000541562 ZNF80P51504 273 aaPredicted RBP11.77□□□□□ -0.52
VARS2-211ENST00000541562 STXBP6Q8NFX7 210 aa11.77□□□□□ -0.52
VARS2-211ENST00000541562 LTAP01374 205 aa11.77□□□□□ -0.53
VARS2-211ENST00000541562 IGLV2-11P01706 119 aa11.77□□□□□ -0.53
VARS2-211ENST00000541562 CRYGCP07315 174 aa11.77□□□□□ -0.53
VARS2-211ENST00000541562 CRYGBP07316 175 aa11.77□□□□□ -0.53
VARS2-211ENST00000541562 MYCNOSP40205 109 aa11.77□□□□□ -0.53
VARS2-211ENST00000541562 FANCD2OSQ96PS1 177 aa11.77□□□□□ -0.53
VARS2-211ENST00000541562 NIPBLQ6KC79 2804 aaeCLIP11.77□□□□□ -0.53
VARS2-211ENST00000541562 C19orf84I3L1E1 186 aa11.77□□□□□ -0.53
VARS2-211ENST00000541562 C3orf36Q3SXR2 165 aa11.77□□□□□ -0.53
VARS2-211ENST00000541562 TMEM70Q9BUB7 260 aa11.77□□□□□ -0.53
VARS2-211ENST00000541562 TTTY13Q9BZ97 58 aa11.77□□□□□ -0.53
VARS2-211ENST00000541562 NUDT3O95989 172 aa11.76□□□□□ -0.53
VARS2-211ENST00000541562 FMC1Q96HJ9 113 aa11.76□□□□□ -0.53
VARS2-211ENST00000541562 MLST8Q9BVC4 326 aa11.76□□□□□ -0.53
VARS2-211ENST00000541562 TEX15Q9BXT5 2789 aa11.76□□□□□ -0.53
VARS2-211ENST00000541562 RNF151Q2KHN1 245 aa11.76□□□□□ -0.53
VARS2-211ENST00000541562 FA2HQ7L5A8 372 aa11.76□□□□□ -0.53
VARS2-211ENST00000541562 UQCR10Q9UDW1 63 aa11.76□□□□□ -0.53
VARS2-211ENST00000541562 A0A1B0GUT8 65 aa11.76□□□□□ -0.53
VARS2-211ENST00000541562 SIGLEC15Q6ZMC9 328 aa11.76□□□□□ -0.53
VARS2-211ENST00000541562 KLK15Q9H2R5 256 aa11.76□□□□□ -0.53
VARS2-211ENST00000541562 TMEM189A5PLL7 270 aa11.75□□□□□ -0.53
VARS2-211ENST00000541562 OR5AL1P0C617 328 aa11.75□□□□□ -0.53
VARS2-211ENST00000541562 TSPOP30536 169 aa11.75□□□□□ -0.53
VARS2-211ENST00000541562 MFAP4P55083 255 aa11.75□□□□□ -0.53
VARS2-211ENST00000541562 ZNF414Q96IQ9 312 aa11.75□□□□□ -0.53
VARS2-211ENST00000541562 OTORQ9NRC9 128 aa11.75□□□□□ -0.53
VARS2-211ENST00000541562 MXRA5Q9NR99 2828 aa11.75□□□□□ -0.53
VARS2-211ENST00000541562 TRAV26-2A0A0B4J265 109 aa11.75□□□□□ -0.53
VARS2-211ENST00000541562 ATP6V0E1O15342 81 aa11.75□□□□□ -0.53
VARS2-211ENST00000541562 NBL1P41271 181 aa11.75□□□□□ -0.53
VARS2-211ENST00000541562 IGF2-ASQ6U949 168 aa11.75□□□□□ -0.53
VARS2-211ENST00000541562 SHANK2-AS3Q9BTD1 123 aa11.75□□□□□ -0.53
VARS2-211ENST00000541562 UFC1Q9Y3C8 167 aa11.75□□□□□ -0.53
VARS2-211ENST00000541562 C2orf70A6NJV1 201 aa11.74□□□□□ -0.53
VARS2-211ENST00000541562 SAA4P35542 130 aa11.74□□□□□ -0.53
VARS2-211ENST00000541562 CSN1S1P47710 185 aa11.74□□□□□ -0.53
VARS2-211ENST00000541562 RHOGP84095 191 aa11.74□□□□□ -0.53
VARS2-211ENST00000541562 VAMP3Q15836 100 aa11.74□□□□□ -0.53
VARS2-211ENST00000541562 C20orf144Q9BQM9 153 aa11.74□□□□□ -0.53
VARS2-211ENST00000541562 SH2D1AO60880 128 aa11.74□□□□□ -0.53
VARS2-211ENST00000541562 PTTG1IPP53801 180 aa11.74□□□□□ -0.53
VARS2-211ENST00000541562 FAM71F2Q6NXP2 309 aa11.74□□□□□ -0.53
VARS2-211ENST00000541562 AGRNO00468 2067 aa11.74□□□□□ -0.53
VARS2-211ENST00000541562 TRAV9-1A0A075B6T8 112 aa11.73□□□□□ -0.53
VARS2-211ENST00000541562 WIPF2Q8TF74 440 aaPredicted RBP11.73□□□□□ -0.53
VARS2-211ENST00000541562 K7EQM0 130 aa11.73□□□□□ -0.53
VARS2-211ENST00000541562 IGF1P05019 195 aa11.73□□□□□ -0.53
VARS2-211ENST00000541562 EGR2P11161 476 aaPredicted RBP11.73□□□□□ -0.53
VARS2-211ENST00000541562 GNLYP22749 145 aa11.73□□□□□ -0.53
VARS2-211ENST00000541562 CEACAM3P40198 252 aa11.73□□□□□ -0.53
VARS2-211ENST00000541562 NHLH1Q02575 133 aa11.73□□□□□ -0.53
VARS2-211ENST00000541562 RAB37Q96AX2 223 aa11.73□□□□□ -0.53
VARS2-211ENST00000541562 MRPL27Q9P0M9 148 aaKnown RBP11.73□□□□□ -0.53
VARS2-211ENST00000541562 C19orf71A6NCJ1 209 aa11.73□□□□□ -0.53
VARS2-211ENST00000541562 DLEU1O43261 78 aa11.73□□□□□ -0.53
VARS2-211ENST00000541562 COL5A1-AS1Q5SY13 56 aa11.73□□□□□ -0.53
VARS2-211ENST00000541562 CFHR4Q92496 578 aa11.73□□□□□ -0.53
VARS2-211ENST00000541562 SYS1-DBNDD2H3BUS1 97 aa11.72□□□□□ -0.53
VARS2-211ENST00000541562 IGKV3-20P01619 116 aa11.72□□□□□ -0.53
VARS2-211ENST00000541562 PSG3Q16557 428 aa11.72□□□□□ -0.53
VARS2-211ENST00000541562 TMEM30BQ3MIR4 351 aa11.72□□□□□ -0.53
VARS2-211ENST00000541562 IL17RELQ6ZVW7 336 aa11.72□□□□□ -0.53
VARS2-211ENST00000541562 AP5S1Q9NUS5 200 aa11.72□□□□□ -0.53
VARS2-211ENST00000541562 TRAV9-2A0A087WT02 112 aa11.71□□□□□ -0.53
VARS2-211ENST00000541562 A0A1B0GXF2 115 aa11.71□□□□□ -0.53
VARS2-211ENST00000541562 CKS2P33552 79 aa11.71□□□□□ -0.53
VARS2-211ENST00000541562 CTRLP40313 264 aa11.71□□□□□ -0.53
VARS2-211ENST00000541562 NMUP48645 174 aa11.71□□□□□ -0.53
VARS2-211ENST00000541562 ATP5IP56385 69 aaPredicted RBP11.71□□□□□ -0.53
VARS2-211ENST00000541562 FAM231DQ6ZW35 169 aa11.71□□□□□ -0.53
VARS2-211ENST00000541562 IGHV7-81A0A0B4J1V7 117 aa11.71□□□□□ -0.54
VARS2-211ENST00000541562 TRBV12-3P01733 135 aa11.71□□□□□ -0.54
VARS2-211ENST00000541562 CTSGP08311 255 aa11.71□□□□□ -0.54
VARS2-211ENST00000541562 HIF1ANQ9NWT6 349 aa11.71□□□□□ -0.54
VARS2-211ENST00000541562 HSBP1L1C9JCN9 74 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms