RNA–Protein interactions for RNA: ENST00000541416.5

SNHG1-216, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 996 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-216ENST00000541416 SLC25A5P05141 298 aaKnown RBP8.4□□□□□ -1.06
SNHG1-216ENST00000541416 RRAS2P62070 204 aaPredicted RBP8.4□□□□□ -1.06
SNHG1-216ENST00000541416 POLR2GP62487 172 aaKnown RBP eCLIP8.4□□□□□ -1.06
SNHG1-216ENST00000541416 KIR3DS1Q14943 382 aa8.4□□□□□ -1.06
SNHG1-216ENST00000541416 GUK1Q16774 197 aa8.4□□□□□ -1.06
SNHG1-216ENST00000541416 MCFD2Q8NI22 146 aa8.4□□□□□ -1.06
SNHG1-216ENST00000541416 DEDD2Q8WXF8 326 aa8.4□□□□□ -1.06
SNHG1-216ENST00000541416 VSIG2Q96IQ7 327 aa8.4□□□□□ -1.06
SNHG1-216ENST00000541416 PARD6GQ9BYG4 376 aaPredicted RBP8.4□□□□□ -1.06
SNHG1-216ENST00000541416 FUT9Q9Y231 359 aa8.4□□□□□ -1.06
SNHG1-216ENST00000541416 TRGV1A0A0A0MS02 117 aa8.39□□□□□ -1.07
SNHG1-216ENST00000541416 SSSCA1O60232 199 aa8.39□□□□□ -1.07
SNHG1-216ENST00000541416 UBE2MP61081 183 aaKnown RBP8.39□□□□□ -1.07
SNHG1-216ENST00000541416 ID3Q02535 119 aa8.39□□□□□ -1.07
SNHG1-216ENST00000541416 SLC38A11Q08AI6 406 aa8.39□□□□□ -1.07
SNHG1-216ENST00000541416 PPP1R1AQ13522 171 aa8.39□□□□□ -1.07
SNHG1-216ENST00000541416 SPCS2Q15005 226 aa8.39□□□□□ -1.07
SNHG1-216ENST00000541416 PATE2Q6UY27 113 aa8.39□□□□□ -1.07
SNHG1-216ENST00000541416 ZNF431Q8TF32 576 aaPredicted RBP8.39□□□□□ -1.07
SNHG1-216ENST00000541416 RAB2BQ8WUD1 216 aa8.39□□□□□ -1.07
SNHG1-216ENST00000541416 SMIM8Q96KF7 97 aa8.39□□□□□ -1.07
SNHG1-216ENST00000541416 LY96Q9Y6Y9 160 aa8.39□□□□□ -1.07
SNHG1-216ENST00000541416 SRRM2Q9UQ35 2752 aaKnown RBP8.39□□□□□ -1.07
SNHG1-216ENST00000541416 A0A087WTM6 91 aa8.38□□□□□ -1.07
SNHG1-216ENST00000541416 ZNF324O75467 553 aaPredicted RBP8.38□□□□□ -1.07
SNHG1-216ENST00000541416 METTL15P1P0C7V9 234 aa8.38□□□□□ -1.07
SNHG1-216ENST00000541416 CT45A10P0DMU9 189 aa8.38□□□□□ -1.07
SNHG1-216ENST00000541416 PRB4P10163 310 aaPredicted RBP8.38□□□□□ -1.07
SNHG1-216ENST00000541416 GCSHP23434 173 aa8.38□□□□□ -1.07
SNHG1-216ENST00000541416 RAB31Q13636 194 aa8.38□□□□□ -1.07
SNHG1-216ENST00000541416 MRPL23Q16540 153 aaKnown RBP8.38□□□□□ -1.07
SNHG1-216ENST00000541416 C10orf113Q5VZT2 155 aa8.38□□□□□ -1.07
SNHG1-216ENST00000541416 Q6ZRG5 221 aa8.38□□□□□ -1.07
SNHG1-216ENST00000541416 EIF4E3Q8N5X7 224 aaKnown RBP8.38□□□□□ -1.07
SNHG1-216ENST00000541416 GGACTQ9BVM4 153 aa8.38□□□□□ -1.07
SNHG1-216ENST00000541416 GSN-AS1Q9NRJ2 163 aa8.38□□□□□ -1.07
SNHG1-216ENST00000541416 PRO0255Q9UI72 69 aa8.38□□□□□ -1.07
SNHG1-216ENST00000541416 C7orf71A4D174 169 aa8.37□□□□□ -1.07
SNHG1-216ENST00000541416 PRAC2D3DTV9 90 aa8.37□□□□□ -1.07
SNHG1-216ENST00000541416 NPIPB6E9PJ23 425 aa8.37□□□□□ -1.07
SNHG1-216ENST00000541416 AGPAT2O15120 278 aa8.37□□□□□ -1.07
SNHG1-216ENST00000541416 NOL3O60936 208 aaKnown RBP8.37□□□□□ -1.07
SNHG1-216ENST00000541416 SNRPCP09234 159 aaKnown RBP8.37□□□□□ -1.07
SNHG1-216ENST00000541416 EVI2AP22794 236 aa8.37□□□□□ -1.07
SNHG1-216ENST00000541416 TNFSF8P32971 234 aa8.37□□□□□ -1.07
SNHG1-216ENST00000541416 ANXA2RQ3ZCQ2 193 aa8.37□□□□□ -1.07
SNHG1-216ENST00000541416 PYDC2Q56P42 97 aa8.37□□□□□ -1.07
SNHG1-216ENST00000541416 Q6ZSN1 163 aa8.37□□□□□ -1.07
SNHG1-216ENST00000541416 DYNC2LI1Q8TCX1 351 aa8.37□□□□□ -1.07
SNHG1-216ENST00000541416 ST6GAL2Q96JF0 529 aa8.37□□□□□ -1.07
SNHG1-216ENST00000541416 BCL7BQ9BQE9 202 aa8.37□□□□□ -1.07
SNHG1-216ENST00000541416 LINC00467Q9BRT7 94 aa8.37□□□□□ -1.07
SNHG1-216ENST00000541416 MRPS26Q9BYN8 205 aaKnown RBP8.37□□□□□ -1.07
SNHG1-216ENST00000541416 J3QL48 77 aa8.36□□□□□ -1.07
SNHG1-216ENST00000541416 SLC17A3O00476 420 aa8.36□□□□□ -1.07
SNHG1-216ENST00000541416 TSC22D2O75157 780 aa8.36□□□□□ -1.07
SNHG1-216ENST00000541416 SMIM18P0DKX4 95 aa8.36□□□□□ -1.07
SNHG1-216ENST00000541416 IGLC2P0DOY2 106 aa8.36□□□□□ -1.07
SNHG1-216ENST00000541416 FUSP35637 526 aaKnown RBP eCLIP8.36□□□□□ -1.07
SNHG1-216ENST00000541416 TAS2R30P59541 319 aa8.36□□□□□ -1.07
SNHG1-216ENST00000541416 KRTAP10-1P60331 282 aa8.36□□□□□ -1.07
SNHG1-216ENST00000541416 TMEM14EPQ6UXP3 125 aa8.36□□□□□ -1.07
SNHG1-216ENST00000541416 NEGR1Q7Z3B1 354 aa8.36□□□□□ -1.07
SNHG1-216ENST00000541416 MRPL53Q96EL3 112 aaKnown RBP8.36□□□□□ -1.07
SNHG1-216ENST00000541416 SOSTQ9BQB4 213 aa8.36□□□□□ -1.07
SNHG1-216ENST00000541416 DNAJC4Q9NNZ3 241 aa8.36□□□□□ -1.07
SNHG1-216ENST00000541416 MSRB1Q9NZV6 116 aa8.36□□□□□ -1.07
SNHG1-216ENST00000541416 HHLA3Q9XRX5 114 aa8.36□□□□□ -1.07
SNHG1-216ENST00000541416 H3BTX0 84 aa8.35□□□□□ -1.07
SNHG1-216ENST00000541416 SPINK4O60575 86 aa8.35□□□□□ -1.07
SNHG1-216ENST00000541416 ZNF253O75346 499 aa8.35□□□□□ -1.07
SNHG1-216ENST00000541416 MPDU1O75352 247 aa8.35□□□□□ -1.07
SNHG1-216ENST00000541416 SCGB1D2O95969 90 aa8.35□□□□□ -1.07
SNHG1-216ENST00000541416 SMR3BP02814 79 aaPredicted RBP8.35□□□□□ -1.07
SNHG1-216ENST00000541416 OR4E1P0C645 316 aa8.35□□□□□ -1.07
SNHG1-216ENST00000541416 DNAH10OSP0CZ25 163 aa8.35□□□□□ -1.07
SNHG1-216ENST00000541416 TMBIM6P55061 237 aa8.35□□□□□ -1.07
SNHG1-216ENST00000541416 TCL1AP56279 114 aa8.35□□□□□ -1.07
SNHG1-216ENST00000541416 OPCMLQ14982 345 aa8.35□□□□□ -1.07
SNHG1-216ENST00000541416 IBA57Q5T440 356 aaKnown RBP8.35□□□□□ -1.07
SNHG1-216ENST00000541416 LYPD5Q6UWN5 251 aa8.35□□□□□ -1.07
SNHG1-216ENST00000541416 C10orf126Q8N4M7 172 aa8.35□□□□□ -1.07
SNHG1-216ENST00000541416 C12orf45Q8N5I9 185 aaPredicted RBP8.35□□□□□ -1.07
SNHG1-216ENST00000541416 C11orf72Q8NBR9 251 aa8.35□□□□□ -1.07
SNHG1-216ENST00000541416 OR1L4Q8NGR5 311 aa8.35□□□□□ -1.07
SNHG1-216ENST00000541416 PCNPQ8WW12 178 aaKnown RBP8.35□□□□□ -1.07
SNHG1-216ENST00000541416 SAT2Q96F10 170 aaPredicted RBP8.35□□□□□ -1.07
SNHG1-216ENST00000541416 LINC00477Q96M19 166 aa8.35□□□□□ -1.07
SNHG1-216ENST00000541416 PFDN5Q99471 154 aa8.35□□□□□ -1.07
SNHG1-216ENST00000541416 PRELID1Q9Y255 219 aa8.35□□□□□ -1.07
SNHG1-216ENST00000541416 LINC00854A0A1B0GVQ3 168 aa8.34□□□□□ -1.07
SNHG1-216ENST00000541416 C9orf170A2RU37 121 aa8.34□□□□□ -1.07
SNHG1-216ENST00000541416 GPX1P07203 203 aa8.34□□□□□ -1.07
SNHG1-216ENST00000541416 NMBP08949 121 aa8.34□□□□□ -1.07
SNHG1-216ENST00000541416 TMEM37Q8WXS4 190 aa8.34□□□□□ -1.07
SNHG1-216ENST00000541416 TRIM63Q969Q1 353 aa8.34□□□□□ -1.07
SNHG1-216ENST00000541416 VGLL1Q99990 258 aa8.34□□□□□ -1.07
SNHG1-216ENST00000541416 ARPC5LQ9BPX5 153 aa8.34□□□□□ -1.07
SNHG1-216ENST00000541416 TMEM70Q9BUB7 260 aa8.34□□□□□ -1.07
SNHG1-216ENST00000541416 TNFRSF18Q9Y5U5 241 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms