RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 TSC22D2O75157 780 aa6.19□□□□□ -1.42
YBX3-211ENST00000541351 C2orf83Q53S99 150 aa6.19□□□□□ -1.42
YBX3-211ENST00000541351 EIF4E3Q8N5X7 224 aaKnown RBP6.19□□□□□ -1.42
YBX3-211ENST00000541351 CLRN3Q8NCR9 226 aa6.19□□□□□ -1.42
YBX3-211ENST00000541351 ATP6V0E2Q8NHE4 81 aa6.19□□□□□ -1.42
YBX3-211ENST00000541351 RMI2Q96E14 147 aa6.19□□□□□ -1.42
YBX3-211ENST00000541351 MRPL32Q9BYC8 188 aaKnown RBP6.19□□□□□ -1.42
YBX3-211ENST00000541351 SLC25A31Q9H0C2 315 aa6.19□□□□□ -1.42
YBX3-211ENST00000541351 HEYLQ9NQ87 328 aaPredicted RBP6.19□□□□□ -1.42
YBX3-211ENST00000541351 EHFQ9NZC4 300 aa6.19□□□□□ -1.42
YBX3-211ENST00000541351 COPZ2Q9P299 210 aa6.19□□□□□ -1.42
YBX3-211ENST00000541351 CACFD1Q9UGQ2 172 aa6.19□□□□□ -1.42
YBX3-211ENST00000541351 SCP2D1Q9UJQ7 156 aa6.19□□□□□ -1.42
YBX3-211ENST00000541351 SLC45A2Q9UMX9 530 aa6.19□□□□□ -1.42
YBX3-211ENST00000541351 TRGV4A0A0C4DH28 118 aa6.18□□□□□ -1.42
YBX3-211ENST00000541351 LINC00854A0A1B0GVQ3 168 aa6.18□□□□□ -1.42
YBX3-211ENST00000541351 K7EQD1 137 aa6.18□□□□□ -1.42
YBX3-211ENST00000541351 SSX5O60225 188 aa6.18□□□□□ -1.42
YBX3-211ENST00000541351 PPT1P50897 306 aa6.18□□□□□ -1.42
YBX3-211ENST00000541351 TIRAPP58753 221 aa6.18□□□□□ -1.42
YBX3-211ENST00000541351 SPCS3P61009 180 aa6.18□□□□□ -1.42
YBX3-211ENST00000541351 KLF9Q13886 244 aaPredicted RBP6.18□□□□□ -1.42
YBX3-211ENST00000541351 LINC01620Q4KN68 170 aa6.18□□□□□ -1.42
YBX3-211ENST00000541351 DHRS11Q6UWP2 260 aa6.18□□□□□ -1.42
YBX3-211ENST00000541351 TMEM91Q6ZNR0 172 aa6.18□□□□□ -1.42
YBX3-211ENST00000541351 C8orf49Q96NF6 230 aa6.18□□□□□ -1.42
YBX3-211ENST00000541351 VGLL1Q99990 258 aa6.18□□□□□ -1.42
YBX3-211ENST00000541351 ZNF2Q9BSG1 426 aaPredicted RBP6.18□□□□□ -1.42
YBX3-211ENST00000541351 SLC25A22Q9H936 323 aa6.18□□□□□ -1.42
YBX3-211ENST00000541351 TMEM56-RWDD3S4R434 201 aa6.18□□□□□ -1.42
YBX3-211ENST00000541351 FAT4Q6V0I7 4981 aa6.17□□□□□ -1.42
YBX3-211ENST00000541351 TRAV1-2A0A0B4J238 106 aa6.17□□□□□ -1.42
YBX3-211ENST00000541351 E5RGE8 158 aa6.17□□□□□ -1.42
YBX3-211ENST00000541351 B3GALNT1O75752 331 aa6.17□□□□□ -1.42
YBX3-211ENST00000541351 SNAPINO95295 136 aa6.17□□□□□ -1.42
YBX3-211ENST00000541351 PTHLHP12272 177 aa6.17□□□□□ -1.42
YBX3-211ENST00000541351 RAB3BP20337 219 aa6.17□□□□□ -1.42
YBX3-211ENST00000541351 FGL1Q08830 312 aa6.17□□□□□ -1.42
YBX3-211ENST00000541351 BTN1A1Q13410 526 aa6.17□□□□□ -1.42
YBX3-211ENST00000541351 C14orf177Q52M58 125 aa6.17□□□□□ -1.42
YBX3-211ENST00000541351 C9orf47Q6ZRZ4 202 aa6.17□□□□□ -1.42
YBX3-211ENST00000541351 FAM219AQ8IW50 185 aa6.17□□□□□ -1.42
YBX3-211ENST00000541351 RNASE11Q8TAA1 199 aaKnown RBP6.17□□□□□ -1.42
YBX3-211ENST00000541351 BLNKQ8WV28 456 aa6.17□□□□□ -1.42
YBX3-211ENST00000541351 SH3BGRL3Q9H299 93 aa6.17□□□□□ -1.42
YBX3-211ENST00000541351 TXNL4BQ9NX01 149 aaKnown RBP6.17□□□□□ -1.42
YBX3-211ENST00000541351 CRCT1Q9UGL9 99 aa6.17□□□□□ -1.42
YBX3-211ENST00000541351 RPH3ALQ9UNE2 315 aa6.17□□□□□ -1.42
YBX3-211ENST00000541351 PCP4L1A6NKN8 68 aa6.16□□□□□ -1.42
YBX3-211ENST00000541351 F8W036 122 aa6.16□□□□□ -1.42
YBX3-211ENST00000541351 LECT2O14960 151 aa6.16□□□□□ -1.42
YBX3-211ENST00000541351 H2AFB1P0C5Y9 115 aa6.16□□□□□ -1.42
YBX3-211ENST00000541351 H2AFB2P0C5Z0 115 aa6.16□□□□□ -1.42
YBX3-211ENST00000541351 SULT1A3P0DMM9 295 aa6.16□□□□□ -1.42
YBX3-211ENST00000541351 SULT1A4P0DMN0 295 aa6.16□□□□□ -1.42
YBX3-211ENST00000541351 TAS2R46P59540 309 aa6.16□□□□□ -1.42
YBX3-211ENST00000541351 POLR2GP62487 172 aaKnown RBP eCLIP6.16□□□□□ -1.42
YBX3-211ENST00000541351 PHLDA2Q53GA4 152 aa6.16□□□□□ -1.42
YBX3-211ENST00000541351 OR10J3Q5JRS4 329 aa6.16□□□□□ -1.42
YBX3-211ENST00000541351 LCE2AQ5TA79 106 aaPredicted RBP6.16□□□□□ -1.42
YBX3-211ENST00000541351 GGNBP1Q5YKI7 109 aa6.16□□□□□ -1.42
YBX3-211ENST00000541351 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.16□□□□□ -1.42
YBX3-211ENST00000541351 S100A7AQ86SG5 101 aa6.16□□□□□ -1.42
YBX3-211ENST00000541351 TBC1D26Q86UD7 250 aa6.16□□□□□ -1.42
YBX3-211ENST00000541351 SLC25A32Q9H2D1 315 aa6.16□□□□□ -1.42
YBX3-211ENST00000541351 MBD2Q9UBB5 411 aa6.16□□□□□ -1.42
YBX3-211ENST00000541351 A0A0A6YYH2 397 aa6.15□□□□□ -1.42
YBX3-211ENST00000541351 TRAV8-1A0A0A6YYK1 113 aa6.15□□□□□ -1.42
YBX3-211ENST00000541351 TRDV1A0A1B0GX56 115 aa6.15□□□□□ -1.42
YBX3-211ENST00000541351 CRYM-AS1A6NIL9 109 aa6.15□□□□□ -1.42
YBX3-211ENST00000541351 A6NJ64 397 aa6.15□□□□□ -1.42
YBX3-211ENST00000541351 SMLR1H3BR10 107 aa6.15□□□□□ -1.42
YBX3-211ENST00000541351 MPC2O95563 127 aa6.15□□□□□ -1.42
YBX3-211ENST00000541351 IGHV3-53P01767 116 aa6.15□□□□□ -1.42
YBX3-211ENST00000541351 IL18Q14116 193 aa6.15□□□□□ -1.42
YBX3-211ENST00000541351 WFDC2Q14508 124 aa6.15□□□□□ -1.42
YBX3-211ENST00000541351 LGALSLQ3ZCW2 172 aaPredicted RBP6.15□□□□□ -1.42
YBX3-211ENST00000541351 GFI1BQ5VTD9 330 aa6.15□□□□□ -1.42
YBX3-211ENST00000541351 REG3GQ6UW15 175 aa6.15□□□□□ -1.42
YBX3-211ENST00000541351 RNF182Q8N6D2 247 aa6.15□□□□□ -1.42
YBX3-211ENST00000541351 SLC35E1Q96K37 410 aa6.15□□□□□ -1.42
YBX3-211ENST00000541351 BIN3Q9NQY0 253 aa6.15□□□□□ -1.42
YBX3-211ENST00000541351 GSN-AS1Q9NRJ2 163 aa6.15□□□□□ -1.42
YBX3-211ENST00000541351 RNF24Q9Y225 148 aa6.15□□□□□ -1.42
YBX3-211ENST00000541351 A0A0J9YXV3 536 aa6.14□□□□□ -1.43
YBX3-211ENST00000541351 GATCO43716 136 aaKnown RBP6.14□□□□□ -1.43
YBX3-211ENST00000541351 SPINK4O60575 86 aa6.14□□□□□ -1.43
YBX3-211ENST00000541351 IGKV1-39P01597 117 aa6.14□□□□□ -1.43
YBX3-211ENST00000541351 IGKV1D-39P04432 117 aa6.14□□□□□ -1.43
YBX3-211ENST00000541351 SEC11BP0C7V7 166 aa6.14□□□□□ -1.43
YBX3-211ENST00000541351 RPL7P18124 248 aaKnown RBP6.14□□□□□ -1.43
YBX3-211ENST00000541351 LEPP41159 167 aa6.14□□□□□ -1.43
YBX3-211ENST00000541351 OPCMLQ14982 345 aa6.14□□□□□ -1.43
YBX3-211ENST00000541351 OR5H2Q8NGV7 314 aa6.14□□□□□ -1.43
YBX3-211ENST00000541351 C12orf57Q99622 126 aa6.14□□□□□ -1.43
YBX3-211ENST00000541351 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.14□□□□□ -1.43
YBX3-211ENST00000541351 TRAV18A0A075B6X5 111 aa6.13□□□□□ -1.43
YBX3-211ENST00000541351 CEBPZOSA8MTT3 80 aa6.13□□□□□ -1.43
YBX3-211ENST00000541351 GIPP09681 153 aaPredicted RBP6.13□□□□□ -1.43
YBX3-211ENST00000541351 TCL1AP56279 114 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms