RNA–Protein interactions for RNA: ENST00000541167.5

RAP1B-223, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-223	ENST00000541167	UBE2L3	P68036	154 aa	Known RBP	14.52	□□□□□ -0.09
RAP1B-223	ENST00000541167	FAM122C	Q6P4D5	195 aa		14.52	□□□□□ -0.09
RAP1B-223	ENST00000541167	ZNF705A	Q6ZN79	300 aa	Predicted RBP	14.52	□□□□□ -0.09
RAP1B-223	ENST00000541167	FXYD5	Q96DB9	178 aa		14.52	□□□□□ -0.09
RAP1B-223	ENST00000541167	PSMG3	Q9BT73	122 aa	Predicted RBP	14.52	□□□□□ -0.09
RAP1B-223	ENST00000541167	AAMDC	Q9H7C9	122 aa		14.52	□□□□□ -0.09
RAP1B-223	ENST00000541167		A0A1W2PPV4	95 aa		14.51	□□□□□ -0.09
RAP1B-223	ENST00000541167	EIF3G	O75821	320 aa	Known RBP eCLIP	14.51	□□□□□ -0.09
RAP1B-223	ENST00000541167	INS	P01308	110 aa		14.51	□□□□□ -0.09
RAP1B-223	ENST00000541167	RBMY1A1	P0DJD3	496 aa	Known RBP	14.51	□□□□□ -0.09
RAP1B-223	ENST00000541167	RBMY1C	P0DJD4	496 aa		14.51	□□□□□ -0.09
RAP1B-223	ENST00000541167	RBMY1F	Q15415	496 aa	Known RBP	14.51	□□□□□ -0.09
RAP1B-223	ENST00000541167	RPL7L1	Q6DKI1	246 aa	Known RBP	14.51	□□□□□ -0.09
RAP1B-223	ENST00000541167	OR2G3	Q8NGZ4	309 aa		14.51	□□□□□ -0.09
RAP1B-223	ENST00000541167	RNF141	Q8WVD5	230 aa		14.51	□□□□□ -0.09
RAP1B-223	ENST00000541167	MRPL53	Q96EL3	112 aa	Known RBP	14.51	□□□□□ -0.09
RAP1B-223	ENST00000541167	IGF2BP2-AS1	Q96M15	143 aa		14.51	□□□□□ -0.09
RAP1B-223	ENST00000541167	PRELID1	Q9Y255	219 aa		14.51	□□□□□ -0.09
RAP1B-223	ENST00000541167		M0R3E3	92 aa		14.5	□□□□□ -0.09
RAP1B-223	ENST00000541167	BAP18	Q8IXM2	172 aa		14.5	□□□□□ -0.09
RAP1B-223	ENST00000541167	EXOC3-AS1	Q8N2X6	119 aa		14.5	□□□□□ -0.09
RAP1B-223	ENST00000541167	OR10G4	Q8NGN3	311 aa		14.5	□□□□□ -0.09
RAP1B-223	ENST00000541167	OR10G9	Q8NGN4	311 aa		14.5	□□□□□ -0.09
RAP1B-223	ENST00000541167	OR10G7	Q8NGN6	311 aa		14.5	□□□□□ -0.09
RAP1B-223	ENST00000541167	C11orf45	Q8TAV5	145 aa		14.5	□□□□□ -0.09
RAP1B-223	ENST00000541167	ZNF503	Q96F45	646 aa		14.5	□□□□□ -0.09
RAP1B-223	ENST00000541167	TMEM208	Q9BTX3	173 aa		14.5	□□□□□ -0.09
RAP1B-223	ENST00000541167	SH3BGRL3	Q9H299	93 aa		14.5	□□□□□ -0.09
RAP1B-223	ENST00000541167	ICAM4	Q14773	271 aa		14.49	□□□□□ -0.09
RAP1B-223	ENST00000541167	C1orf158	Q8N1D5	194 aa		14.49	□□□□□ -0.09
RAP1B-223	ENST00000541167	PHYHIPL	Q96FC7	376 aa		14.49	□□□□□ -0.09
RAP1B-223	ENST00000541167	NEU1	Q99519	415 aa		14.49	□□□□□ -0.09
RAP1B-223	ENST00000541167	TRAV12-2	A0A075B6T6	113 aa		14.48	□□□□□ -0.09
RAP1B-223	ENST00000541167	SMIM9	A6NGZ8	99 aa		14.48	□□□□□ -0.09
RAP1B-223	ENST00000541167	CRX	O43186	299 aa	Predicted RBP	14.48	□□□□□ -0.09
RAP1B-223	ENST00000541167	CDC34	P49427	236 aa	Predicted RBP	14.48	□□□□□ -0.09
RAP1B-223	ENST00000541167	NANOS2	P60321	138 aa	Known RBP	14.48	□□□□□ -0.09
RAP1B-223	ENST00000541167	GNPNAT1	Q96EK6	184 aa	Predicted RBP	14.48	□□□□□ -0.09
RAP1B-223	ENST00000541167	STARD9	Q9P2P6	4700 aa		14.48	□□□□□ -0.09
RAP1B-223	ENST00000541167	TAAR5	O14804	337 aa		14.47	□□□□□ -0.09
RAP1B-223	ENST00000541167	MB	P02144	154 aa		14.47	□□□□□ -0.09
RAP1B-223	ENST00000541167	SERF2	P84101	59 aa		14.47	□□□□□ -0.09
RAP1B-223	ENST00000541167	NUPR2	A6NF83	97 aa		14.46	□□□□□ -0.09
RAP1B-223	ENST00000541167	NPIPB6	E9PJ23	425 aa		14.46	□□□□□ -0.09
RAP1B-223	ENST00000541167	HMGB3	O15347	200 aa	Known RBP	14.46	□□□□□ -0.09
RAP1B-223	ENST00000541167	HBE1	P02100	147 aa		14.46	□□□□□ -0.09
RAP1B-223	ENST00000541167	CDKN1B	P46527	198 aa		14.46	□□□□□ -0.09
RAP1B-223	ENST00000541167	PQLC2	Q6ZP29	291 aa		14.46	□□□□□ -0.09
RAP1B-223	ENST00000541167	RPP25L	Q8N5L8	163 aa	Known RBP	14.46	□□□□□ -0.09
RAP1B-223	ENST00000541167	JTB	O76095	146 aa		14.45	□□□□□ -0.1
RAP1B-223	ENST00000541167	TSPO	P30536	169 aa		14.45	□□□□□ -0.1
RAP1B-223	ENST00000541167	RAN	P62826	216 aa	Known RBP	14.45	□□□□□ -0.1
RAP1B-223	ENST00000541167		Q9H3A6	140 aa		14.45	□□□□□ -0.1
RAP1B-223	ENST00000541167	CSMD3	Q7Z407	3707 aa		14.45	□□□□□ -0.1
RAP1B-223	ENST00000541167	CT45A10	P0DMU9	189 aa		14.44	□□□□□ -0.1
RAP1B-223	ENST00000541167	EMP1	P54849	157 aa		14.44	□□□□□ -0.1
RAP1B-223	ENST00000541167	ERCC8	Q13216	396 aa		14.44	□□□□□ -0.1
RAP1B-223	ENST00000541167	ZNF345	Q14585	488 aa		14.44	□□□□□ -0.1
RAP1B-223	ENST00000541167	RRN3P1	Q2M238	152 aa		14.44	□□□□□ -0.1
RAP1B-223	ENST00000541167	LYPD1	Q8N2G4	141 aa		14.44	□□□□□ -0.1
RAP1B-223	ENST00000541167	OR11H4	Q8NGC9	324 aa		14.44	□□□□□ -0.1
RAP1B-223	ENST00000541167	ODF3	Q96PU9	254 aa		14.44	□□□□□ -0.1
RAP1B-223	ENST00000541167	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	14.43	□□□□□ -0.1
RAP1B-223	ENST00000541167	LOC102723971	A0A1B0GUV8	181 aa		14.43	□□□□□ -0.1
RAP1B-223	ENST00000541167	TMEM189	A5PLL7	270 aa		14.43	□□□□□ -0.1
RAP1B-223	ENST00000541167	HMSD	A8MTL9	139 aa		14.43	□□□□□ -0.1
RAP1B-223	ENST00000541167	IGKV2D-40	P01614	121 aa	Predicted RBP	14.43	□□□□□ -0.1
RAP1B-223	ENST00000541167	ARL14EPL	P0DKL9	152 aa		14.43	□□□□□ -0.1
RAP1B-223	ENST00000541167	LEP	P41159	167 aa		14.43	□□□□□ -0.1
RAP1B-223	ENST00000541167	CEMP1	Q6PRD7	247 aa	Predicted RBP	14.43	□□□□□ -0.1
RAP1B-223	ENST00000541167		Q6ZNX1	250 aa		14.43	□□□□□ -0.1
RAP1B-223	ENST00000541167	KCNRG	Q8N5I3	272 aa		14.43	□□□□□ -0.1
RAP1B-223	ENST00000541167	PHLDA1	Q8WV24	401 aa	Predicted RBP	14.43	□□□□□ -0.1
RAP1B-223	ENST00000541167	RAB24	Q969Q5	203 aa		14.43	□□□□□ -0.1
RAP1B-223	ENST00000541167	ARPC5L	Q9BPX5	153 aa		14.43	□□□□□ -0.1
RAP1B-223	ENST00000541167	CYTL1	Q9NRR1	136 aa		14.43	□□□□□ -0.1
RAP1B-223	ENST00000541167	CELA1	Q9UNI1	258 aa		14.43	□□□□□ -0.1
RAP1B-223	ENST00000541167		J3KRW8	73 aa		14.42	□□□□□ -0.1
RAP1B-223	ENST00000541167	STAG3L2	P0CL84	134 aa		14.42	□□□□□ -0.1
RAP1B-223	ENST00000541167	STAG3L3	P0CL85	134 aa		14.42	□□□□□ -0.1
RAP1B-223	ENST00000541167	CSN1S1	P47710	185 aa		14.42	□□□□□ -0.1
RAP1B-223	ENST00000541167	TMEM256	Q8N2U0	113 aa		14.42	□□□□□ -0.1
RAP1B-223	ENST00000541167	LINC01587	Q99440	93 aa		14.42	□□□□□ -0.1
RAP1B-223	ENST00000541167	ACTR3C	Q9C0K3	210 aa	Predicted RBP	14.42	□□□□□ -0.1
RAP1B-223	ENST00000541167	ZNF705G	A8MUZ8	300 aa	Predicted RBP	14.41	□□□□□ -0.1
RAP1B-223	ENST00000541167	KIR3DS1	Q14943	382 aa		14.41	□□□□□ -0.1
RAP1B-223	ENST00000541167	GFI1B	Q5VTD9	330 aa		14.41	□□□□□ -0.1
RAP1B-223	ENST00000541167	LINC00477	Q96M19	166 aa		14.41	□□□□□ -0.1
RAP1B-223	ENST00000541167	AGPAT4-IT1	Q9H0P7	198 aa		14.41	□□□□□ -0.1
RAP1B-223	ENST00000541167	KLK5	Q9Y337	293 aa	Predicted RBP	14.41	□□□□□ -0.1
RAP1B-223	ENST00000541167		A0A0D9SG52	128 aa		14.4	□□□□□ -0.1
RAP1B-223	ENST00000541167	AKR1C8P	Q5T2L2	129 aa		14.4	□□□□□ -0.1
RAP1B-223	ENST00000541167	TMEM78	Q5T7P6	136 aa		14.4	□□□□□ -0.1
RAP1B-223	ENST00000541167	C9orf47	Q6ZRZ4	202 aa		14.4	□□□□□ -0.1
RAP1B-223	ENST00000541167	C20orf144	Q9BQM9	153 aa		14.4	□□□□□ -0.1
RAP1B-223	ENST00000541167	OTOR	Q9NRC9	128 aa		14.4	□□□□□ -0.1
RAP1B-223	ENST00000541167	KANTR	A0A1W2PQU2	76 aa		14.39	□□□□□ -0.11
RAP1B-223	ENST00000541167	PRM2	P04554	102 aa		14.39	□□□□□ -0.11
RAP1B-223	ENST00000541167	FAM74A1	Q5RGS3	127 aa		14.39	□□□□□ -0.11
RAP1B-223	ENST00000541167	ZNF767P	Q75MW2	155 aa		14.39	□□□□□ -0.11

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