RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 SHANK2-AS3Q9BTD1 123 aa11.08□□□□□ -0.64
INO80E-203ENST00000540562 ZANQ9Y493 2812 aa11.08□□□□□ -0.64
INO80E-203ENST00000540562 LINC01548A6NM66 108 aa11.07□□□□□ -0.64
INO80E-203ENST00000540562 INS-IGF2F8WCM5 200 aa11.07□□□□□ -0.64
INO80E-203ENST00000540562 ORM1P02763 201 aa11.07□□□□□ -0.64
INO80E-203ENST00000540562 EVI2AP22794 236 aa11.07□□□□□ -0.64
INO80E-203ENST00000540562 IGF2-ASQ6U949 168 aa11.07□□□□□ -0.64
INO80E-203ENST00000540562 Q6ZQT7 251 aa11.07□□□□□ -0.64
INO80E-203ENST00000540562 C1RLQ9NZP8 487 aa11.07□□□□□ -0.64
INO80E-203ENST00000540562 ITPR1Q14643 2758 aa11.07□□□□□ -0.64
INO80E-203ENST00000540562 G3V318 75 aa11.07□□□□□ -0.64
INO80E-203ENST00000540562 ZFP36P26651 326 aaKnown RBP11.07□□□□□ -0.64
INO80E-203ENST00000540562 VMO1Q7Z5L0 202 aa11.07□□□□□ -0.64
INO80E-203ENST00000540562 AAMDCQ9H7C9 122 aa11.07□□□□□ -0.64
INO80E-203ENST00000540562 AP5S1Q9NUS5 200 aa11.07□□□□□ -0.64
INO80E-203ENST00000540562 ZFP30Q9Y2G7 519 aa11.07□□□□□ -0.64
INO80E-203ENST00000540562 TWIST1Q15672 202 aa11.07□□□□□ -0.64
INO80E-203ENST00000540562 TMEM219Q86XT9 240 aa11.07□□□□□ -0.64
INO80E-203ENST00000540562 ZNF414Q96IQ9 312 aa11.07□□□□□ -0.64
INO80E-203ENST00000540562 HSBP1L1C9JCN9 74 aa11.06□□□□□ -0.64
INO80E-203ENST00000540562 ZNF80P51504 273 aaPredicted RBP11.06□□□□□ -0.64
INO80E-203ENST00000540562 KLF5Q13887 457 aaPredicted RBP11.06□□□□□ -0.64
INO80E-203ENST00000540562 LY6DQ14210 128 aa11.06□□□□□ -0.64
INO80E-203ENST00000540562 PSG3Q16557 428 aa11.06□□□□□ -0.64
INO80E-203ENST00000540562 ARPC1AQ92747 370 aa11.06□□□□□ -0.64
INO80E-203ENST00000540562 FANCD2OSQ96PS1 177 aa11.06□□□□□ -0.64
INO80E-203ENST00000540562 MAP1LC3CQ9BXW4 147 aa11.06□□□□□ -0.64
INO80E-203ENST00000540562 A0A1W2PPR1 153 aa11.06□□□□□ -0.64
INO80E-203ENST00000540562 DEFB1P60022 68 aa11.06□□□□□ -0.64
INO80E-203ENST00000540562 PRSS57Q6UWY2 283 aa11.06□□□□□ -0.64
INO80E-203ENST00000540562 ATP5L2Q7Z4Y8 100 aa11.06□□□□□ -0.64
INO80E-203ENST00000540562 VKORC1Q9BQB6 163 aa11.06□□□□□ -0.64
INO80E-203ENST00000540562 C21orf62Q9NYP8 219 aa11.06□□□□□ -0.64
INO80E-203ENST00000540562 K7EQM0 130 aa11.05□□□□□ -0.64
INO80E-203ENST00000540562 OR5AL1P0C617 328 aa11.05□□□□□ -0.64
INO80E-203ENST00000540562 C5orf64Q2M2E5 130 aa11.05□□□□□ -0.64
INO80E-203ENST00000540562 TIMD4Q96H15 378 aa11.05□□□□□ -0.64
INO80E-203ENST00000540562 USP9XQ93008 2570 aaPredicted RBP11.05□□□□□ -0.64
INO80E-203ENST00000540562 TMEM189A5PLL7 270 aa11.05□□□□□ -0.64
INO80E-203ENST00000540562 PRAC2D3DTV9 90 aa11.05□□□□□ -0.64
INO80E-203ENST00000540562 H3BRN7 92 aa11.05□□□□□ -0.64
INO80E-203ENST00000540562 SH2D1AO60880 128 aa11.05□□□□□ -0.64
INO80E-203ENST00000540562 GATA1P15976 413 aaPredicted RBP11.05□□□□□ -0.64
INO80E-203ENST00000540562 UBTD1Q9HAC8 227 aa11.05□□□□□ -0.64
INO80E-203ENST00000540562 NHLH1Q02575 133 aa11.04□□□□□ -0.64
INO80E-203ENST00000540562 RAB1BQ9H0U4 201 aa11.04□□□□□ -0.64
INO80E-203ENST00000540562 PKD1L2Q7Z442 2459 aa11.04□□□□□ -0.64
INO80E-203ENST00000540562 EGR2P11161 476 aaPredicted RBP11.04□□□□□ -0.64
INO80E-203ENST00000540562 CSN1S1P47710 185 aa11.04□□□□□ -0.64
INO80E-203ENST00000540562 RASL11AQ6T310 242 aa11.04□□□□□ -0.64
INO80E-203ENST00000540562 TTTY13Q9BZ97 58 aa11.04□□□□□ -0.64
INO80E-203ENST00000540562 K7EMI3 77 aa11.03□□□□□ -0.64
INO80E-203ENST00000540562 K7ENP7 123 aa11.03□□□□□ -0.64
INO80E-203ENST00000540562 MFAP4P55083 255 aa11.03□□□□□ -0.64
INO80E-203ENST00000540562 RNASE8Q8TDE3 154 aaKnown RBP11.03□□□□□ -0.64
INO80E-203ENST00000540562 NEU4Q8WWR8 484 aaPredicted RBP11.03□□□□□ -0.64
INO80E-203ENST00000540562 CFHR4Q92496 578 aa11.03□□□□□ -0.64
INO80E-203ENST00000540562 TMEM191AQ9H0A3 160 aa11.03□□□□□ -0.64
INO80E-203ENST00000540562 LY6LH3BQJ8 138 aa11.03□□□□□ -0.64
INO80E-203ENST00000540562 CACNG7P62955 275 aa11.03□□□□□ -0.64
INO80E-203ENST00000540562 RIGQ13278 110 aa11.03□□□□□ -0.64
INO80E-203ENST00000540562 C8orf31Q8N9H6 132 aa11.03□□□□□ -0.64
INO80E-203ENST00000540562 CLEC3BP05452 202 aa11.03□□□□□ -0.64
INO80E-203ENST00000540562 ADORA2A-AS1P86434 159 aa11.03□□□□□ -0.64
INO80E-203ENST00000540562 C15orf32Q32M92 178 aa11.03□□□□□ -0.64
INO80E-203ENST00000540562 CLEC19AQ6UXS0 136 aa11.03□□□□□ -0.64
INO80E-203ENST00000540562 F8W735 103 aaPredicted RBP11.02□□□□□ -0.65
INO80E-203ENST00000540562 SLC25A34Q6PIV7 304 aa11.02□□□□□ -0.65
INO80E-203ENST00000540562 ZNF492Q9P255 531 aa11.02□□□□□ -0.65
INO80E-203ENST00000540562 CFAP46Q8IYW2 2715 aa11.02□□□□□ -0.65
INO80E-203ENST00000540562 CKS2P33552 79 aa11.02□□□□□ -0.65
INO80E-203ENST00000540562 NMUP48645 174 aa11.02□□□□□ -0.65
INO80E-203ENST00000540562 PRELID3AQ96N28 172 aa11.02□□□□□ -0.65
INO80E-203ENST00000540562 PTPN13Q12923 2485 aa11.02□□□□□ -0.65
INO80E-203ENST00000540562 PLP1P60201 277 aa11.01□□□□□ -0.65
INO80E-203ENST00000540562 OR4C5Q8NGB2 326 aa11.01□□□□□ -0.65
INO80E-203ENST00000540562 TNFRSF14Q92956 283 aa11.01□□□□□ -0.65
INO80E-203ENST00000540562 RAB37Q96AX2 223 aa11.01□□□□□ -0.65
INO80E-203ENST00000540562 SIGLEC8Q9NYZ4 499 aa11.01□□□□□ -0.65
INO80E-203ENST00000540562 SOX21Q9Y651 276 aaPredicted RBP11.01□□□□□ -0.65
INO80E-203ENST00000540562 MYO9AB2RTY4 2548 aa11.01□□□□□ -0.65
INO80E-203ENST00000540562 LCNL1Q6ZST4 164 aa11.01□□□□□ -0.65
INO80E-203ENST00000540562 ZNF738Q8NE65 137 aa11.01□□□□□ -0.65
INO80E-203ENST00000540562 ABCA12Q86UK0 2595 aa11.01□□□□□ -0.65
INO80E-203ENST00000540562 TRAV26-2A0A0B4J265 109 aa11□□□□□ -0.65
INO80E-203ENST00000540562 HAX1O00165 279 aa11□□□□□ -0.65
INO80E-203ENST00000540562 NPYP01303 97 aa11□□□□□ -0.65
INO80E-203ENST00000540562 CEACAM3P40198 252 aa11□□□□□ -0.65
INO80E-203ENST00000540562 COX11Q9Y6N1 276 aa11□□□□□ -0.65
INO80E-203ENST00000540562 SONP18583 2426 aaKnown RBP11□□□□□ -0.65
INO80E-203ENST00000540562 ANKRD39Q53RE8 183 aa11□□□□□ -0.65
INO80E-203ENST00000540562 BRD3OSQ6XYD6 125 aa11□□□□□ -0.65
INO80E-203ENST00000540562 NPIPB6E9PJ23 425 aa11□□□□□ -0.65
INO80E-203ENST00000540562 CTSGP08311 255 aa11□□□□□ -0.65
INO80E-203ENST00000540562 IL17RELQ6ZVW7 336 aa11□□□□□ -0.65
INO80E-203ENST00000540562 WFDC12Q8WWY7 111 aa11□□□□□ -0.65
INO80E-203ENST00000540562 IGLV11-55A0A075B6I3 123 aa10.99□□□□□ -0.65
INO80E-203ENST00000540562 ATP6V0E1O15342 81 aa10.99□□□□□ -0.65
INO80E-203ENST00000540562 RHOGP84095 191 aa10.99□□□□□ -0.65
INO80E-203ENST00000540562 PVRIGQ6DKI7 326 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms