RNA–Protein interactions for RNA: ENST00000540452.1

C2CD3-215, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 430 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-215ENST00000540452 HIST1H2BNQ99877 126 aa6.39□□□□□ -1.39
C2CD3-215ENST00000540452 HIST1H2BMQ99879 126 aa6.39□□□□□ -1.39
C2CD3-215ENST00000540452 NDFIP1Q9BT67 221 aa6.39□□□□□ -1.39
C2CD3-215ENST00000540452 RPP21Q9H633 154 aaKnown RBP6.39□□□□□ -1.39
C2CD3-215ENST00000540452 ZNF702PQ9H963 129 aa6.39□□□□□ -1.39
C2CD3-215ENST00000540452 GNB4Q9HAV0 340 aa6.39□□□□□ -1.39
C2CD3-215ENST00000540452 UFC1Q9Y3C8 167 aa6.39□□□□□ -1.39
C2CD3-215ENST00000540452 CSPG4Q6UVK1 2322 aa6.38□□□□□ -1.39
C2CD3-215ENST00000540452 SLC17A3O00476 420 aa6.38□□□□□ -1.39
C2CD3-215ENST00000540452 IGHV3-23P01764 117 aa6.38□□□□□ -1.39
C2CD3-215ENST00000540452 CT45A10P0DMU9 189 aa6.38□□□□□ -1.39
C2CD3-215ENST00000540452 HOXA5P20719 270 aa6.38□□□□□ -1.39
C2CD3-215ENST00000540452 GNG5P63218 68 aa6.38□□□□□ -1.39
C2CD3-215ENST00000540452 OR5I1Q13606 314 aa6.38□□□□□ -1.39
C2CD3-215ENST00000540452 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.38□□□□□ -1.39
C2CD3-215ENST00000540452 EXOC3-AS1Q8N2X6 119 aa6.38□□□□□ -1.39
C2CD3-215ENST00000540452 GBGT1Q8N5D6 347 aa6.38□□□□□ -1.39
C2CD3-215ENST00000540452 OR4X2Q8NGF9 303 aa6.38□□□□□ -1.39
C2CD3-215ENST00000540452 PSG8Q9UQ74 426 aa6.38□□□□□ -1.39
C2CD3-215ENST00000540452 SMAD5-AS1Q9Y6J3 95 aa6.38□□□□□ -1.39
C2CD3-215ENST00000540452 S4R3C0 116 aa6.38□□□□□ -1.39
C2CD3-215ENST00000540452 CCDC168Q8NDH2 2452 aa6.38□□□□□ -1.39
C2CD3-215ENST00000540452 CRYBG3Q68DQ2 2970 aa6.38□□□□□ -1.39
C2CD3-215ENST00000540452 VPS13CQ709C8 3753 aa6.38□□□□□ -1.39
C2CD3-215ENST00000540452 TRAV34A0A0B4J273 112 aa6.37□□□□□ -1.39
C2CD3-215ENST00000540452 IGHV7-4-1A0A0J9YVY3 117 aa6.37□□□□□ -1.39
C2CD3-215ENST00000540452 SH2D7A6NKC9 451 aaPredicted RBP6.37□□□□□ -1.39
C2CD3-215ENST00000540452 HOXA3O43365 443 aaPredicted RBP6.37□□□□□ -1.39
C2CD3-215ENST00000540452 LGALS1P09382 135 aaKnown RBP6.37□□□□□ -1.39
C2CD3-215ENST00000540452 TRGC1P0CF51 173 aa6.37□□□□□ -1.39
C2CD3-215ENST00000540452 CDX1P47902 265 aaPredicted RBP6.37□□□□□ -1.39
C2CD3-215ENST00000540452 RPS20P60866 119 aaKnown RBP6.37□□□□□ -1.39
C2CD3-215ENST00000540452 WFDC11Q8NEX6 87 aa6.37□□□□□ -1.39
C2CD3-215ENST00000540452 LINC00479Q96M42 142 aa6.37□□□□□ -1.39
C2CD3-215ENST00000540452 NOL4LQ96MY1 436 aaPredicted RBP6.37□□□□□ -1.39
C2CD3-215ENST00000540452 RNASE7Q9H1E1 156 aaKnown RBP6.37□□□□□ -1.39
C2CD3-215ENST00000540452 AURKAIP1Q9NWT8 199 aaPredicted RBP6.37□□□□□ -1.39
C2CD3-215ENST00000540452 CHEK1O14757 476 aa6.36□□□□□ -1.39
C2CD3-215ENST00000540452 SMIM6P0DI80 62 aa6.36□□□□□ -1.39
C2CD3-215ENST00000540452 SNRPEP62304 92 aaKnown RBP6.36□□□□□ -1.39
C2CD3-215ENST00000540452 FABP9Q0Z7S8 132 aa6.36□□□□□ -1.39
C2CD3-215ENST00000540452 DNLZQ5SXM8 178 aa6.36□□□□□ -1.39
C2CD3-215ENST00000540452 FAM162BQ5T6X4 162 aa6.36□□□□□ -1.39
C2CD3-215ENST00000540452 LCN12Q6JVE5 192 aa6.36□□□□□ -1.39
C2CD3-215ENST00000540452 RBPMS2Q6ZRY4 209 aaKnown RBP6.36□□□□□ -1.39
C2CD3-215ENST00000540452 C9orf47Q6ZRZ4 202 aa6.36□□□□□ -1.39
C2CD3-215ENST00000540452 C8orf86Q6ZUL3 223 aa6.36□□□□□ -1.39
C2CD3-215ENST00000540452 ZFP82Q8N141 532 aa6.36□□□□□ -1.39
C2CD3-215ENST00000540452 MAPK1IP1LQ8NDC0 245 aa6.36□□□□□ -1.39
C2CD3-215ENST00000540452 FRZBQ92765 325 aa6.36□□□□□ -1.39
C2CD3-215ENST00000540452 PACRGQ96M98 296 aaPredicted RBP6.36□□□□□ -1.39
C2CD3-215ENST00000540452 C17orf77Q96MU5 243 aa6.36□□□□□ -1.39
C2CD3-215ENST00000540452 PRR25Q96S07 402 aa6.36□□□□□ -1.39
C2CD3-215ENST00000540452 KLK15Q9H2R5 256 aa6.36□□□□□ -1.39
C2CD3-215ENST00000540452 TRAPPC1Q9Y5R8 145 aa6.36□□□□□ -1.39
C2CD3-215ENST00000540452 OTOGQ6ZRI0 2925 aa6.36□□□□□ -1.39
C2CD3-215ENST00000540452 ZFHX3Q15911 3703 aa6.36□□□□□ -1.39
C2CD3-215ENST00000540452 APCP25054 2843 aa6.35□□□□□ -1.39
C2CD3-215ENST00000540452 TRAV2A0A0B4J234 112 aa6.35□□□□□ -1.39
C2CD3-215ENST00000540452 A0A1B0GXF2 115 aa6.35□□□□□ -1.39
C2CD3-215ENST00000540452 OVOL1O14753 267 aa6.35□□□□□ -1.39
C2CD3-215ENST00000540452 KRTAP1-1Q07627 177 aa6.35□□□□□ -1.39
C2CD3-215ENST00000540452 SMUG1Q53HV7 270 aa6.35□□□□□ -1.39
C2CD3-215ENST00000540452 OR10J3Q5JRS4 329 aa6.35□□□□□ -1.39
C2CD3-215ENST00000540452 Q6ZS46 218 aa6.35□□□□□ -1.39
C2CD3-215ENST00000540452 PRNTQ86SH4 94 aa6.35□□□□□ -1.39
C2CD3-215ENST00000540452 SIGLECL1Q8N7X8 197 aa6.35□□□□□ -1.39
C2CD3-215ENST00000540452 GATD1Q8NB37 220 aa6.35□□□□□ -1.39
C2CD3-215ENST00000540452 JMJD8Q96S16 334 aa6.35□□□□□ -1.39
C2CD3-215ENST00000540452 ASCL2Q99929 193 aa6.35□□□□□ -1.39
C2CD3-215ENST00000540452 NRN1Q9NPD7 142 aa6.35□□□□□ -1.39
C2CD3-215ENST00000540452 SERTAD4Q9NUC0 356 aa6.35□□□□□ -1.39
C2CD3-215ENST00000540452 SMPXQ9UHP9 88 aa6.35□□□□□ -1.39
C2CD3-215ENST00000540452 LINC00527Q9UJ94 153 aa6.35□□□□□ -1.39
C2CD3-215ENST00000540452 RPH3ALQ9UNE2 315 aa6.35□□□□□ -1.39
C2CD3-215ENST00000540452 HIVEP1P15822 2718 aa6.35□□□□□ -1.39
C2CD3-215ENST00000540452 NBPF19A0A087WUL8 3843 aa6.35□□□□□ -1.39
C2CD3-215ENST00000540452 HIGD1CA8MV81 97 aa6.34□□□□□ -1.39
C2CD3-215ENST00000540452 M0R3E3 92 aa6.34□□□□□ -1.39
C2CD3-215ENST00000540452 SOCS3O14543 225 aa6.34□□□□□ -1.39
C2CD3-215ENST00000540452 RNASE1P07998 156 aaKnown RBP6.34□□□□□ -1.39
C2CD3-215ENST00000540452 ESDP10768 282 aa6.34□□□□□ -1.39
C2CD3-215ENST00000540452 HBBP68871 147 aa6.34□□□□□ -1.39
C2CD3-215ENST00000540452 Q0VG73 95 aa6.34□□□□□ -1.39
C2CD3-215ENST00000540452 TMEM78Q5T7P6 136 aa6.34□□□□□ -1.39
C2CD3-215ENST00000540452 TMEM136Q6ZRR5 245 aa6.34□□□□□ -1.39
C2CD3-215ENST00000540452 NUP35Q8NFH5 326 aa6.34□□□□□ -1.39
C2CD3-215ENST00000540452 C4orf3Q8WVX3 66 aa6.34□□□□□ -1.39
C2CD3-215ENST00000540452 ZC2HC1AQ96GY0 325 aa6.34□□□□□ -1.39
C2CD3-215ENST00000540452 LINC00477Q96M19 166 aa6.34□□□□□ -1.39
C2CD3-215ENST00000540452 NEU1Q99519 415 aa6.34□□□□□ -1.39
C2CD3-215ENST00000540452 C16orf95Q9H693 158 aa6.34□□□□□ -1.39
C2CD3-215ENST00000540452 CELSR2Q9HCU4 2923 aa6.34□□□□□ -1.39
C2CD3-215ENST00000540452 TRAV8-1A0A0A6YYK1 113 aa6.33□□□□□ -1.4
C2CD3-215ENST00000540452 IGHV3-35A0A0C4DH35 117 aa6.33□□□□□ -1.4
C2CD3-215ENST00000540452 FABP5P3A8MUU1 101 aa6.33□□□□□ -1.4
C2CD3-215ENST00000540452 SNURFLB1AK76 121 aa6.33□□□□□ -1.4
C2CD3-215ENST00000540452 H3BTX0 84 aa6.33□□□□□ -1.4
C2CD3-215ENST00000540452 ID1P41134 155 aa6.33□□□□□ -1.4
C2CD3-215ENST00000540452 ZNF138P52744 262 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms