RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 PLNP26678 52 aa8.86□□□□□ -0.99
PBX1-212ENST00000540236 Q6ZQT7 251 aa8.86□□□□□ -0.99
PBX1-212ENST00000540236 E9PLD3 99 aa8.86□□□□□ -0.99
PBX1-212ENST00000540236 CRLF1O75462 422 aa8.86□□□□□ -0.99
PBX1-212ENST00000540236 WDR31Q8NA23 367 aa8.86□□□□□ -0.99
PBX1-212ENST00000540236 TIMM23O14925 209 aa8.85□□□□□ -0.99
PBX1-212ENST00000540236 CXCL10P02778 98 aa8.85□□□□□ -0.99
PBX1-212ENST00000540236 CCL8P80075 99 aa8.85□□□□□ -0.99
PBX1-212ENST00000540236 CARD19Q96LW7 228 aa8.85□□□□□ -0.99
PBX1-212ENST00000540236 SLC25A39Q9BZJ4 359 aaPredicted RBP8.85□□□□□ -0.99
PBX1-212ENST00000540236 M0R2P5 195 aa8.85□□□□□ -0.99
PBX1-212ENST00000540236 NSUN5P1Q3KNT7 163 aa8.85□□□□□ -0.99
PBX1-212ENST00000540236 WDR86Q86TI4 376 aa8.85□□□□□ -0.99
PBX1-212ENST00000540236 TMEM101Q96IK0 257 aa8.85□□□□□ -0.99
PBX1-212ENST00000540236 IGKV3-20P01619 116 aa8.85□□□□□ -0.99
PBX1-212ENST00000540236 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.85□□□□□ -0.99
PBX1-212ENST00000540236 PLEKHB2Q96CS7 222 aa8.85□□□□□ -0.99
PBX1-212ENST00000540236 SPRY4Q9C004 299 aa8.85□□□□□ -0.99
PBX1-212ENST00000540236 LINC01548A6NM66 108 aa8.85□□□□□ -0.99
PBX1-212ENST00000540236 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.85□□□□□ -0.99
PBX1-212ENST00000540236 ZNF134P52741 427 aa8.85□□□□□ -0.99
PBX1-212ENST00000540236 Q71RC1 249 aaPredicted RBP8.85□□□□□ -0.99
PBX1-212ENST00000540236 RNF152Q8N8N0 203 aa8.85□□□□□ -0.99
PBX1-212ENST00000540236 GFRA4Q9GZZ7 299 aa8.85□□□□□ -0.99
PBX1-212ENST00000540236 TMEM126AQ9H061 195 aa8.85□□□□□ -0.99
PBX1-212ENST00000540236 CCL3L1P16619 93 aa8.84□□□□□ -0.99
PBX1-212ENST00000540236 HRCT1Q6UXD1 115 aa8.84□□□□□ -0.99
PBX1-212ENST00000540236 C21orf62Q9NYP8 219 aa8.84□□□□□ -0.99
PBX1-212ENST00000540236 PINLYPA6NC86 204 aa8.84□□□□□ -0.99
PBX1-212ENST00000540236 NDUFB3O43676 98 aa8.84□□□□□ -0.99
PBX1-212ENST00000540236 RNASE4P34096 147 aaKnown RBP8.84□□□□□ -0.99
PBX1-212ENST00000540236 HERVK_113P63121 156 aa8.84□□□□□ -0.99
PBX1-212ENST00000540236 CLEC2BQ92478 149 aa8.84□□□□□ -0.99
PBX1-212ENST00000540236 RNASE2P10153 161 aaKnown RBP8.84□□□□□ -0.99
PBX1-212ENST00000540236 ECSCRQ19T08 205 aa8.84□□□□□ -0.99
PBX1-212ENST00000540236 FAM231DQ6ZW35 169 aa8.84□□□□□ -0.99
PBX1-212ENST00000540236 RNF182Q8N6D2 247 aa8.84□□□□□ -0.99
PBX1-212ENST00000540236 SMRP1Q8NCR6 262 aa8.84□□□□□ -0.99
PBX1-212ENST00000540236 IGFBPL1Q8WX77 278 aa8.84□□□□□ -0.99
PBX1-212ENST00000540236 VWC2LB2RUY7 222 aa8.84□□□□□ -1
PBX1-212ENST00000540236 Q6ZS49 121 aa8.83□□□□□ -1
PBX1-212ENST00000540236 TET1Q8NFU7 2136 aa8.83□□□□□ -1
PBX1-212ENST00000540236 FER1L5A0AVI2 2057 aa8.83□□□□□ -1
PBX1-212ENST00000540236 IFI6P09912 130 aa8.83□□□□□ -1
PBX1-212ENST00000540236 ASCL5Q7RTU5 278 aa8.83□□□□□ -1
PBX1-212ENST00000540236 TRGV8A0A0C4DH27 118 aa8.83□□□□□ -1
PBX1-212ENST00000540236 LMO7DNF2Z398 122 aa8.83□□□□□ -1
PBX1-212ENST00000540236 C10orf105Q8TEF2 133 aa8.83□□□□□ -1
PBX1-212ENST00000540236 IGKV3OR2-268A0A0C4DH90 116 aa8.83□□□□□ -1
PBX1-212ENST00000540236 IGLV3-1P01715 115 aa8.82□□□□□ -1
PBX1-212ENST00000540236 CDIP1Q9H305 208 aa8.82□□□□□ -1
PBX1-212ENST00000540236 IGKV3D-7A0A0C4DH55 119 aa8.82□□□□□ -1
PBX1-212ENST00000540236 IGHV5-10-1A0A0J9YXX1 117 aa8.82□□□□□ -1
PBX1-212ENST00000540236 FOXL2NBQ6ZUU3 175 aa8.82□□□□□ -1
PBX1-212ENST00000540236 PRR20EP86478 221 aa8.82□□□□□ -1
PBX1-212ENST00000540236 PRR20CP86479 221 aa8.82□□□□□ -1
PBX1-212ENST00000540236 PRR20DP86480 221 aa8.82□□□□□ -1
PBX1-212ENST00000540236 PRR20BP86481 221 aa8.82□□□□□ -1
PBX1-212ENST00000540236 PRR20AP86496 221 aa8.82□□□□□ -1
PBX1-212ENST00000540236 TRAV21A0A0B4J279 112 aa8.82□□□□□ -1
PBX1-212ENST00000540236 NPFFO15130 113 aa8.82□□□□□ -1
PBX1-212ENST00000540236 CNTFRP26992 372 aa8.82□□□□□ -1
PBX1-212ENST00000540236 SPXQ9BT56 116 aa8.82□□□□□ -1
PBX1-212ENST00000540236 PRO1854Q9UHT4 67 aa8.82□□□□□ -1
PBX1-212ENST00000540236 EML5Q05BV3 1969 aa8.81□□□□□ -1
PBX1-212ENST00000540236 IGKV1OR2-108A0A075B7D4 117 aa8.81□□□□□ -1
PBX1-212ENST00000540236 TTTY12Q9BZ98 90 aa8.81□□□□□ -1
PBX1-212ENST00000540236 URB1O60287 2271 aaKnown RBP8.81□□□□□ -1
PBX1-212ENST00000540236 HLA-DMBP28068 263 aa8.81□□□□□ -1
PBX1-212ENST00000540236 C14orf178Q8N769 122 aaPredicted RBP8.81□□□□□ -1
PBX1-212ENST00000540236 C16orf92Q96LL3 132 aa8.81□□□□□ -1
PBX1-212ENST00000540236 LGALS1P09382 135 aaKnown RBP8.81□□□□□ -1
PBX1-212ENST00000540236 RNASE13Q5GAN3 156 aaKnown RBP8.81□□□□□ -1
PBX1-212ENST00000540236 TPSG1Q9NRR2 321 aa8.81□□□□□ -1
PBX1-212ENST00000540236 IGHV3-73A0A0B4J1V6 119 aa8.8□□□□□ -1
PBX1-212ENST00000540236 SMIM9A6NGZ8 99 aa8.8□□□□□ -1
PBX1-212ENST00000540236 ZNF492Q9P255 531 aa8.8□□□□□ -1
PBX1-212ENST00000540236 RNF7Q9UBF6 113 aa8.8□□□□□ -1
PBX1-212ENST00000540236 ZCCHC24Q8N2G6 241 aaKnown RBP8.8□□□□□ -1
PBX1-212ENST00000540236 LINC00477Q96M19 166 aa8.8□□□□□ -1
PBX1-212ENST00000540236 CFHR1Q03591 330 aa8.8□□□□□ -1
PBX1-212ENST00000540236 Q8N1Y9 231 aa8.8□□□□□ -1
PBX1-212ENST00000540236 TNRC6BQ9UPQ9 1833 aaKnown RBP8.8□□□□□ -1
PBX1-212ENST00000540236 TRGV5A0A0B4J1U4 118 aa8.8□□□□□ -1
PBX1-212ENST00000540236 UTF1Q5T230 341 aa8.8□□□□□ -1
PBX1-212ENST00000540236 Q8TCH9 128 aa8.8□□□□□ -1
PBX1-212ENST00000540236 RP1P56715 2156 aa8.8□□□□□ -1
PBX1-212ENST00000540236 DNAH14Q0VDD8 3507 aa8.79□□□□□ -1
PBX1-212ENST00000540236 A0A087WX48 190 aa8.79□□□□□ -1
PBX1-212ENST00000540236 CR1LQ2VPA4 569 aa8.79□□□□□ -1
PBX1-212ENST00000540236 RBAKDNA6NC62 111 aa8.79□□□□□ -1
PBX1-212ENST00000540236 SRRM4A7MD48 611 aaKnown RBP8.79□□□□□ -1
PBX1-212ENST00000540236 C6orf15Q6UXA7 325 aaPredicted RBP8.79□□□□□ -1
PBX1-212ENST00000540236 CD3EP07766 207 aa8.79□□□□□ -1
PBX1-212ENST00000540236 DTX2Q86UW9 622 aa8.79□□□□□ -1
PBX1-212ENST00000540236 LINC00312Q9Y6C7 94 aa8.79□□□□□ -1
PBX1-212ENST00000540236 TRGV11A0A075B6L2 103 aa8.79□□□□□ -1
PBX1-212ENST00000540236 A0A1B0GXF2 115 aa8.79□□□□□ -1
PBX1-212ENST00000540236 ZNF415Q09FC8 603 aa8.79□□□□□ -1
PBX1-212ENST00000540236 WFDC11Q8NEX6 87 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms