RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 SMIM9A6NGZ8 99 aa10.79□□□□□ -0.68
UBE3B-212ENST00000540230 C17orf112F2Z3M2 114 aa10.79□□□□□ -0.68
UBE3B-212ENST00000540230 INSP01308 110 aa10.79□□□□□ -0.68
UBE3B-212ENST00000540230 OXA1LQ15070 435 aa10.79□□□□□ -0.68
UBE3B-212ENST00000540230 FFAR4Q5NUL3 377 aa10.79□□□□□ -0.68
UBE3B-212ENST00000540230 BLNKQ8WV28 456 aa10.79□□□□□ -0.68
UBE3B-212ENST00000540230 KCNIP2Q9NS61 270 aa10.79□□□□□ -0.68
UBE3B-212ENST00000540230 LOC102723971A0A1B0GUV8 181 aa10.78□□□□□ -0.68
UBE3B-212ENST00000540230 ZNF253O75346 499 aa10.78□□□□□ -0.68
UBE3B-212ENST00000540230 IFNA5P01569 189 aa10.78□□□□□ -0.68
UBE3B-212ENST00000540230 HBE1P02100 147 aa10.78□□□□□ -0.68
UBE3B-212ENST00000540230 AMBPP02760 352 aa10.78□□□□□ -0.68
UBE3B-212ENST00000540230 EXOC3-AS1Q8N2X6 119 aa10.78□□□□□ -0.68
UBE3B-212ENST00000540230 ZNF503Q96F45 646 aa10.78□□□□□ -0.68
UBE3B-212ENST00000540230 MRPL32Q9BYC8 188 aaKnown RBP10.78□□□□□ -0.68
UBE3B-212ENST00000540230 PLA2G2EQ9NZK7 142 aa10.78□□□□□ -0.68
UBE3B-212ENST00000540230 FUT9Q9Y231 359 aa10.78□□□□□ -0.68
UBE3B-212ENST00000540230 ZNF705GA8MUZ8 300 aaPredicted RBP10.77□□□□□ -0.69
UBE3B-212ENST00000540230 GIPP09681 153 aaPredicted RBP10.77□□□□□ -0.69
UBE3B-212ENST00000540230 OR10J4P0C629 311 aa10.77□□□□□ -0.69
UBE3B-212ENST00000540230 RRN3P1Q2M238 152 aa10.77□□□□□ -0.69
UBE3B-212ENST00000540230 RPP25LQ8N5L8 163 aaKnown RBP10.77□□□□□ -0.69
UBE3B-212ENST00000540230 SCGB1C1Q8TD33 95 aa10.77□□□□□ -0.69
UBE3B-212ENST00000540230 FXYD5Q96DB9 178 aa10.77□□□□□ -0.69
UBE3B-212ENST00000540230 TMEM208Q9BTX3 173 aa10.77□□□□□ -0.69
UBE3B-212ENST00000540230 OR51M1Q9H341 326 aa10.77□□□□□ -0.69
UBE3B-212ENST00000540230 LY6G6CO95867 125 aa10.76□□□□□ -0.69
UBE3B-212ENST00000540230 PDE6HQ13956 83 aa10.76□□□□□ -0.69
UBE3B-212ENST00000540230 FAM222AQ5U5X8 452 aa10.76□□□□□ -0.69
UBE3B-212ENST00000540230 OR10J6PQ8NGY7 276 aa10.76□□□□□ -0.69
UBE3B-212ENST00000540230 C2CD4CQ8TF44 421 aa10.76□□□□□ -0.69
UBE3B-212ENST00000540230 AQP10Q96PS8 301 aa10.76□□□□□ -0.69
UBE3B-212ENST00000540230 PPP1R14DQ9NXH3 145 aa10.76□□□□□ -0.69
UBE3B-212ENST00000540230 DKK2Q9UBU2 259 aa10.76□□□□□ -0.69
UBE3B-212ENST00000540230 YTHDF2Q9Y5A9 579 aaKnown RBP10.76□□□□□ -0.69
UBE3B-212ENST00000540230 TIMM9Q9Y5J7 89 aa10.76□□□□□ -0.69
UBE3B-212ENST00000540230 TMEM189A5PLL7 270 aa10.75□□□□□ -0.69
UBE3B-212ENST00000540230 IGLL5B9A064 214 aa10.75□□□□□ -0.69
UBE3B-212ENST00000540230 C11orf94C9JXX5 98 aa10.75□□□□□ -0.69
UBE3B-212ENST00000540230 NPIPB6E9PJ23 425 aa10.75□□□□□ -0.69
UBE3B-212ENST00000540230 G3V3Q6 166 aa10.75□□□□□ -0.69
UBE3B-212ENST00000540230 NBEAP1P0C6P0 100 aa10.75□□□□□ -0.69
UBE3B-212ENST00000540230 CT45A10P0DMU9 189 aa10.75□□□□□ -0.69
UBE3B-212ENST00000540230 AZU1P20160 251 aa10.75□□□□□ -0.69
UBE3B-212ENST00000540230 CDKN1BP46527 198 aa10.75□□□□□ -0.69
UBE3B-212ENST00000540230 ERCC8Q13216 396 aa10.75□□□□□ -0.69
UBE3B-212ENST00000540230 PHYHIPLQ96FC7 376 aa10.75□□□□□ -0.69
UBE3B-212ENST00000540230 PAXXQ9BUH6 204 aa10.75□□□□□ -0.69
UBE3B-212ENST00000540230 DNAH6Q9C0G6 4158 aa10.75□□□□□ -0.69
UBE3B-212ENST00000540230 EPPK1P58107 5090 aaKnown RBP10.75□□□□□ -0.69
UBE3B-212ENST00000540230 TRAV10A0A0B4J240 114 aa10.74□□□□□ -0.69
UBE3B-212ENST00000540230 RNF222A6NCQ9 220 aa10.74□□□□□ -0.69
UBE3B-212ENST00000540230 J3KRW8 73 aa10.74□□□□□ -0.69
UBE3B-212ENST00000540230 OR7C2O60412 319 aa10.74□□□□□ -0.69
UBE3B-212ENST00000540230 SPART-AS1P0CW21 52 aa10.74□□□□□ -0.69
UBE3B-212ENST00000540230 ICAM4Q14773 271 aa10.74□□□□□ -0.69
UBE3B-212ENST00000540230 GFI1BQ5VTD9 330 aa10.74□□□□□ -0.69
UBE3B-212ENST00000540230 RNF141Q8WVD5 230 aa10.74□□□□□ -0.69
UBE3B-212ENST00000540230 MRPL53Q96EL3 112 aaKnown RBP10.74□□□□□ -0.69
UBE3B-212ENST00000540230 PLAC8L1A1L4L8 177 aa10.74□□□□□ -0.69
UBE3B-212ENST00000540230 RAB2AP61019 212 aa10.74□□□□□ -0.69
UBE3B-212ENST00000540230 FAM122CQ6P4D5 195 aa10.74□□□□□ -0.69
UBE3B-212ENST00000540230 APLNQ9ULZ1 77 aa10.74□□□□□ -0.69
UBE3B-212ENST00000540230 IGKV2-40A0A087WW87 121 aaPredicted RBP10.73□□□□□ -0.69
UBE3B-212ENST00000540230 DEFB131BA0A096LNP1 70 aa10.73□□□□□ -0.69
UBE3B-212ENST00000540230 IGKV2D-40P01614 121 aaPredicted RBP10.73□□□□□ -0.69
UBE3B-212ENST00000540230 HSD17B11Q8NBQ5 300 aa10.73□□□□□ -0.69
UBE3B-212ENST00000540230 OR2T35Q8NGX2 323 aa10.73□□□□□ -0.69
UBE3B-212ENST00000540230 LINC01587Q99440 93 aa10.73□□□□□ -0.69
UBE3B-212ENST00000540230 IGHV4-4A0A075B6R2 117 aa10.72□□□□□ -0.69
UBE3B-212ENST00000540230 FXYD6-FXYD2A0A087WZ82 144 aa10.72□□□□□ -0.69
UBE3B-212ENST00000540230 M6PRP20645 277 aa10.72□□□□□ -0.69
UBE3B-212ENST00000540230 UBE2L3P68036 154 aaKnown RBP10.72□□□□□ -0.69
UBE3B-212ENST00000540230 ASB13Q8WXK3 278 aa10.72□□□□□ -0.69
UBE3B-212ENST00000540230 NIPSNAP3BQ9BS92 247 aa10.72□□□□□ -0.69
UBE3B-212ENST00000540230 AGPAT4-IT1Q9H0P7 198 aa10.72□□□□□ -0.69
UBE3B-212ENST00000540230 AAMDCQ9H7C9 122 aa10.72□□□□□ -0.69
UBE3B-212ENST00000540230 PRELID1Q9Y255 219 aa10.72□□□□□ -0.69
UBE3B-212ENST00000540230 HTN1P15515 57 aa10.71□□□□□ -0.69
UBE3B-212ENST00000540230 ATP6V0CP27449 155 aa10.71□□□□□ -0.69
UBE3B-212ENST00000540230 ZNF266Q14584 549 aa10.71□□□□□ -0.69
UBE3B-212ENST00000540230 ACOT6Q3I5F7 207 aaPredicted RBP10.71□□□□□ -0.69
UBE3B-212ENST00000540230 TMEM256Q8N2U0 113 aa10.71□□□□□ -0.69
UBE3B-212ENST00000540230 ODF3Q96PU9 254 aa10.71□□□□□ -0.69
UBE3B-212ENST00000540230 VGLL1Q99990 258 aa10.71□□□□□ -0.69
UBE3B-212ENST00000540230 TNFSF18Q9UNG2 199 aa10.71□□□□□ -0.69
UBE3B-212ENST00000540230 FRAS1Q86XX4 4008 aa10.7□□□□□ -0.7
UBE3B-212ENST00000540230 HMGB3O15347 200 aaKnown RBP10.7□□□□□ -0.7
UBE3B-212ENST00000540230 TSPOP30536 169 aa10.7□□□□□ -0.7
UBE3B-212ENST00000540230 TAS2R60P59551 318 aa10.7□□□□□ -0.7
UBE3B-212ENST00000540230 RANP62826 216 aaKnown RBP10.7□□□□□ -0.7
UBE3B-212ENST00000540230 KHDC3LQ587J8 217 aa10.7□□□□□ -0.7
UBE3B-212ENST00000540230 LGALS9CQ6DKI2 356 aa10.7□□□□□ -0.7
UBE3B-212ENST00000540230 FAM19A4Q96LR4 140 aa10.7□□□□□ -0.7
UBE3B-212ENST00000540230 SH3BGRL3Q9H299 93 aa10.7□□□□□ -0.7
UBE3B-212ENST00000540230 TRAV12-3A0A0B4J271 114 aa10.69□□□□□ -0.7
UBE3B-212ENST00000540230 SMLR1H3BR10 107 aa10.69□□□□□ -0.7
UBE3B-212ENST00000540230 LEPP41159 167 aa10.69□□□□□ -0.7
UBE3B-212ENST00000540230 TAS2R45P59539 299 aa10.69□□□□□ -0.7
UBE3B-212ENST00000540230 RPL7L1Q6DKI1 246 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms