RNA–Protein interactions for RNA: ENST00000540128.1

TRIM65-202, Transcript of tripartite motif containing 65, humanhuman

TSL 3

Gene TRIM65, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-202ENST00000540128 PRAC2D3DTV9 90 aa16.05■□□□□ 0.16
TRIM65-202ENST00000540128 CDC34P49427 236 aaPredicted RBP16.05■□□□□ 0.16
TRIM65-202ENST00000540128 LYPD1Q8N2G4 141 aa16.05■□□□□ 0.16
TRIM65-202ENST00000540128 SLC35B3Q9H1N7 401 aa16.05■□□□□ 0.16
TRIM65-202ENST00000540128 hCG_2014768A0A024R1R8 64 aa16.04■□□□□ 0.16
TRIM65-202ENST00000540128 ZNF705EA8MWA4 302 aaPredicted RBP16.04■□□□□ 0.16
TRIM65-202ENST00000540128 BCL2L11O43521 198 aa16.04■□□□□ 0.16
TRIM65-202ENST00000540128 C1QBP02746 253 aa16.04■□□□□ 0.16
TRIM65-202ENST00000540128 STAG3L2P0CL84 134 aa16.04■□□□□ 0.16
TRIM65-202ENST00000540128 STAG3L3P0CL85 134 aa16.04■□□□□ 0.16
TRIM65-202ENST00000540128 UBE2L3P68036 154 aaKnown RBP16.04■□□□□ 0.16
TRIM65-202ENST00000540128 HIST1H1AQ02539 215 aaPredicted RBP16.04■□□□□ 0.16
TRIM65-202ENST00000540128 RAB24Q969Q5 203 aa16.04■□□□□ 0.16
TRIM65-202ENST00000540128 EIF3GO75821 320 aaKnown RBP eCLIP16.03■□□□□ 0.16
TRIM65-202ENST00000540128 AMBPP02760 352 aa16.03■□□□□ 0.16
TRIM65-202ENST00000540128 TMUB2Q71RG4 321 aa16.03■□□□□ 0.16
TRIM65-202ENST00000540128 AKAP14Q86UN6 197 aa16.03■□□□□ 0.16
TRIM65-202ENST00000540128 EXOC3-AS1Q8N2X6 119 aa16.03■□□□□ 0.16
TRIM65-202ENST00000540128 ACTR3CQ9C0K3 210 aaPredicted RBP16.03■□□□□ 0.16
TRIM65-202ENST00000540128 AAMDCQ9H7C9 122 aa16.03■□□□□ 0.16
TRIM65-202ENST00000540128 KANTRA0A1W2PQU2 76 aa16.02■□□□□ 0.16
TRIM65-202ENST00000540128 M0R3E3 92 aa16.02■□□□□ 0.16
TRIM65-202ENST00000540128 FXYD7P58549 80 aa16.02■□□□□ 0.16
TRIM65-202ENST00000540128 ZNF705AQ6ZN79 300 aaPredicted RBP16.02■□□□□ 0.16
TRIM65-202ENST00000540128 OR10J6PQ8NGY7 276 aa16.02■□□□□ 0.16
TRIM65-202ENST00000540128 SUN5Q8TC36 379 aa16.02■□□□□ 0.16
TRIM65-202ENST00000540128 PHYHIPLQ96FC7 376 aa16.02■□□□□ 0.16
TRIM65-202ENST00000540128 X6R8D5 127 aa16.02■□□□□ 0.16
TRIM65-202ENST00000540128 ICAM4Q14773 271 aa16.01■□□□□ 0.15
TRIM65-202ENST00000540128 LGALSLQ3ZCW2 172 aaPredicted RBP16.01■□□□□ 0.15
TRIM65-202ENST00000540128 HYLS1Q96M11 299 aa16.01■□□□□ 0.15
TRIM65-202ENST00000540128 A0A1B0GVG6 124 aa16■□□□□ 0.15
TRIM65-202ENST00000540128 NPIPB6E9PJ23 425 aa16■□□□□ 0.15
TRIM65-202ENST00000540128 BOLA2-SMG1P6H3BVE0 249 aa16■□□□□ 0.15
TRIM65-202ENST00000540128 RANP62826 216 aaKnown RBP16■□□□□ 0.15
TRIM65-202ENST00000540128 IGF2BP2-AS1Q96M15 143 aa16■□□□□ 0.15
TRIM65-202ENST00000540128 NEU1Q99519 415 aa16■□□□□ 0.15
TRIM65-202ENST00000540128 A0A0J9YWU9 116 aa15.99■□□□□ 0.15
TRIM65-202ENST00000540128 HMGB3O15347 200 aaKnown RBP15.99■□□□□ 0.15
TRIM65-202ENST00000540128 CRXO43186 299 aaPredicted RBP15.99■□□□□ 0.15
TRIM65-202ENST00000540128 SEC11BP0C7V7 166 aa15.99■□□□□ 0.15
TRIM65-202ENST00000540128 ARL14EPLP0DKL9 152 aa15.99■□□□□ 0.15
TRIM65-202ENST00000540128 PRB4P10163 310 aaPredicted RBP15.99■□□□□ 0.15
TRIM65-202ENST00000540128 MIFP14174 115 aa15.99■□□□□ 0.15
TRIM65-202ENST00000540128 EIF5AP63241 154 aaKnown RBP15.99■□□□□ 0.15
TRIM65-202ENST00000540128 AKR1C8PQ5T2L2 129 aa15.99■□□□□ 0.15
TRIM65-202ENST00000540128 MUC7Q8TAX7 377 aa15.99■□□□□ 0.15
TRIM65-202ENST00000540128 ODF3Q96PU9 254 aa15.99■□□□□ 0.15
TRIM65-202ENST00000540128 ZNF471Q9BX82 626 aaPredicted RBP15.99■□□□□ 0.15
TRIM65-202ENST00000540128 Q9H3A6 140 aa15.99■□□□□ 0.15
TRIM65-202ENST00000540128 C11orf68Q9H3H3 251 aaKnown RBP15.99■□□□□ 0.15
TRIM65-202ENST00000540128 ZNF726P1Q15940 193 aa15.98■□□□□ 0.15
TRIM65-202ENST00000540128 SPINK13Q1W4C9 94 aa15.98■□□□□ 0.15
TRIM65-202ENST00000540128 C1orf158Q8N1D5 194 aa15.98■□□□□ 0.15
TRIM65-202ENST00000540128 Q8NAQ8 132 aa15.98■□□□□ 0.15
TRIM65-202ENST00000540128 CTXND1A0A1B0GTU2 59 aa15.97■□□□□ 0.15
TRIM65-202ENST00000540128 C3orf84H3BNL1 204 aa15.97■□□□□ 0.15
TRIM65-202ENST00000540128 M0R2Z0 102 aa15.97■□□□□ 0.15
TRIM65-202ENST00000540128 PFDN1O60925 122 aa15.97■□□□□ 0.15
TRIM65-202ENST00000540128 CXorf1O96002 111 aa15.97■□□□□ 0.15
TRIM65-202ENST00000540128 CT45A10P0DMU9 189 aa15.97■□□□□ 0.15
TRIM65-202ENST00000540128 GCHFRP30047 84 aa15.97■□□□□ 0.15
TRIM65-202ENST00000540128 CD300CQ08708 224 aa15.97■□□□□ 0.15
TRIM65-202ENST00000540128 SSX7Q7RTT5 188 aa15.97■□□□□ 0.15
TRIM65-202ENST00000540128 BAP18Q8IXM2 172 aa15.97■□□□□ 0.15
TRIM65-202ENST00000540128 ARL6IP6Q8N6S5 226 aa15.97■□□□□ 0.15
TRIM65-202ENST00000540128 IL17DQ8TAD2 202 aa15.97■□□□□ 0.15
TRIM65-202ENST00000540128 STOML3Q8TAV4 291 aa15.97■□□□□ 0.15
TRIM65-202ENST00000540128 LINC00477Q96M19 166 aa15.97■□□□□ 0.15
TRIM65-202ENST00000540128 OTORQ9NRC9 128 aa15.97■□□□□ 0.15
TRIM65-202ENST00000540128 PPP1R14DQ9NXH3 145 aa15.97■□□□□ 0.15
TRIM65-202ENST00000540128 PLA2G2EQ9NZK7 142 aa15.97■□□□□ 0.15
TRIM65-202ENST00000540128 SMIM9A6NGZ8 99 aa15.96■□□□□ 0.15
TRIM65-202ENST00000540128 CDKN1BP46527 198 aa15.96■□□□□ 0.15
TRIM65-202ENST00000540128 C9orf47Q6ZRZ4 202 aa15.96■□□□□ 0.15
TRIM65-202ENST00000540128 RXFP4Q8TDU9 374 aa15.96■□□□□ 0.15
TRIM65-202ENST00000540128 AGPAT4-IT1Q9H0P7 198 aa15.96■□□□□ 0.15
TRIM65-202ENST00000540128 GOLT1BQ9Y3E0 138 aa15.96■□□□□ 0.15
TRIM65-202ENST00000540128 TSPOP30536 169 aa15.95■□□□□ 0.14
TRIM65-202ENST00000540128 CSN1S1P47710 185 aa15.95■□□□□ 0.14
TRIM65-202ENST00000540128 TMEM167BQ9NRX6 74 aa15.95■□□□□ 0.14
TRIM65-202ENST00000540128 IGHV4-28A0A0C4DH34 117 aa15.94■□□□□ 0.14
TRIM65-202ENST00000540128 RBAKDNA6NC62 111 aa15.94■□□□□ 0.14
TRIM65-202ENST00000540128 UMAD1C9J7I0 102 aa15.94■□□□□ 0.14
TRIM65-202ENST00000540128 INSP01308 110 aa15.94■□□□□ 0.14
TRIM65-202ENST00000540128 RBMY1A1P0DJD3 496 aaKnown RBP15.94■□□□□ 0.14
TRIM65-202ENST00000540128 RBMY1CP0DJD4 496 aa15.94■□□□□ 0.14
TRIM65-202ENST00000540128 TPT1P13693 172 aaKnown RBP15.94■□□□□ 0.14
TRIM65-202ENST00000540128 RBMY1FQ15415 496 aaKnown RBP15.94■□□□□ 0.14
TRIM65-202ENST00000540128 FAM19A4Q96LR4 140 aa15.94■□□□□ 0.14
TRIM65-202ENST00000540128 PGPA6NDG6 321 aa15.93■□□□□ 0.14
TRIM65-202ENST00000540128 SLC25A5P05141 298 aaKnown RBP15.93■□□□□ 0.14
TRIM65-202ENST00000540128 ERCC8Q13216 396 aa15.93■□□□□ 0.14
TRIM65-202ENST00000540128 FAM74A1Q5RGS3 127 aa15.93■□□□□ 0.14
TRIM65-202ENST00000540128 TRAV12-2A0A075B6T6 113 aa15.92■□□□□ 0.14
TRIM65-202ENST00000540128 IGKV2-40A0A087WW87 121 aaPredicted RBP15.92■□□□□ 0.14
TRIM65-202ENST00000540128 IGKV2D-40P01614 121 aaPredicted RBP15.92■□□□□ 0.14
TRIM65-202ENST00000540128 LEPP41159 167 aa15.92■□□□□ 0.14
TRIM65-202ENST00000540128 VGLL1Q99990 258 aa15.92■□□□□ 0.14
TRIM65-202ENST00000540128 DNAH7Q8WXX0 4024 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms