RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 SORL1Q92673 2214 aa8.02□□□□□ -1.12
TRAF1-202ENST00000540010 DCHS1Q96JQ0 3298 aa8.02□□□□□ -1.13
TRAF1-202ENST00000540010 TPTE2P1Q5T6R2 138 aa8.02□□□□□ -1.13
TRAF1-202ENST00000540010 MRPL27Q9P0M9 148 aaKnown RBP8.02□□□□□ -1.13
TRAF1-202ENST00000540010 V9GYV3 84 aa8.02□□□□□ -1.13
TRAF1-202ENST00000540010 COX6CP09669 75 aa8.02□□□□□ -1.13
TRAF1-202ENST00000540010 RHOGP84095 191 aa8.02□□□□□ -1.13
TRAF1-202ENST00000540010 KLRD1Q13241 179 aa8.02□□□□□ -1.13
TRAF1-202ENST00000540010 CR1LQ2VPA4 569 aa8.02□□□□□ -1.13
TRAF1-202ENST00000540010 MAJINQ3KP22 176 aa8.02□□□□□ -1.13
TRAF1-202ENST00000540010 UTF1Q5T230 341 aa8.02□□□□□ -1.13
TRAF1-202ENST00000540010 PVRIGQ6DKI7 326 aa8.02□□□□□ -1.13
TRAF1-202ENST00000540010 SMAGPQ0VAQ4 97 aa8.02□□□□□ -1.13
TRAF1-202ENST00000540010 ZNF672Q499Z4 452 aaPredicted RBP8.02□□□□□ -1.13
TRAF1-202ENST00000540010 DYNLRB2Q8TF09 96 aa8.02□□□□□ -1.13
TRAF1-202ENST00000540010 TMEM14BQ9NUH8 114 aa8.02□□□□□ -1.13
TRAF1-202ENST00000540010 IGHV1-3A0A0C4DH29 117 aa8.01□□□□□ -1.13
TRAF1-202ENST00000540010 IGLL1P15814 213 aa8.01□□□□□ -1.13
TRAF1-202ENST00000540010 IFI27P40305 119 aaPredicted RBP8.01□□□□□ -1.13
TRAF1-202ENST00000540010 FAM106AQ4KMX7 169 aa8.01□□□□□ -1.13
TRAF1-202ENST00000540010 CLEC2AQ6UVW9 174 aa8.01□□□□□ -1.13
TRAF1-202ENST00000540010 ZNF329Q86UD4 541 aa8.01□□□□□ -1.13
TRAF1-202ENST00000540010 BCL6BQ8N143 479 aaPredicted RBP8.01□□□□□ -1.13
TRAF1-202ENST00000540010 GAGE12BA1L429 117 aa8.01□□□□□ -1.13
TRAF1-202ENST00000540010 PSMB11A5LHX3 300 aa8.01□□□□□ -1.13
TRAF1-202ENST00000540010 SRD5A1P18405 259 aa8.01□□□□□ -1.13
TRAF1-202ENST00000540010 COL8A2P25067 703 aa8.01□□□□□ -1.13
TRAF1-202ENST00000540010 BRWD1-AS2P59051 145 aa8.01□□□□□ -1.13
TRAF1-202ENST00000540010 IGKV3OR2-268A0A0C4DH90 116 aa8.01□□□□□ -1.13
TRAF1-202ENST00000540010 RNASE4P34096 147 aaKnown RBP8.01□□□□□ -1.13
TRAF1-202ENST00000540010 ASIPP42127 132 aa8.01□□□□□ -1.13
TRAF1-202ENST00000540010 FAM168AQ92567 244 aa8.01□□□□□ -1.13
TRAF1-202ENST00000540010 SIGLEC9Q9Y336 463 aa8.01□□□□□ -1.13
TRAF1-202ENST00000540010 DSCAML1Q8TD84 2053 aa8.01□□□□□ -1.13
TRAF1-202ENST00000540010 PROP1O75360 226 aa8□□□□□ -1.13
TRAF1-202ENST00000540010 FBXL19-AS1Q494R0 122 aa8□□□□□ -1.13
TRAF1-202ENST00000540010 COX11Q9Y6N1 276 aa8□□□□□ -1.13
TRAF1-202ENST00000540010 DSCAMO60469 2012 aa8□□□□□ -1.13
TRAF1-202ENST00000540010 A0A0G2JLM5 398 aa8□□□□□ -1.13
TRAF1-202ENST00000540010 ITGB1BP1O14713 200 aa8□□□□□ -1.13
TRAF1-202ENST00000540010 DPM2O94777 84 aa8□□□□□ -1.13
TRAF1-202ENST00000540010 CGB3P0DN86 165 aa8□□□□□ -1.13
TRAF1-202ENST00000540010 CGB7P0DN87 165 aa8□□□□□ -1.13
TRAF1-202ENST00000540010 EIF4EBP1Q13541 118 aaPredicted RBP8□□□□□ -1.13
TRAF1-202ENST00000540010 TRGV9Q99603 122 aa8□□□□□ -1.13
TRAF1-202ENST00000540010 SRRM4A7MD48 611 aaKnown RBP8□□□□□ -1.13
TRAF1-202ENST00000540010 CNTFRP26992 372 aa8□□□□□ -1.13
TRAF1-202ENST00000540010 SEC11AP67812 179 aa8□□□□□ -1.13
TRAF1-202ENST00000540010 CDSNQ15517 529 aa8□□□□□ -1.13
TRAF1-202ENST00000540010 RASL11AQ6T310 242 aa8□□□□□ -1.13
TRAF1-202ENST00000540010 SYT8Q8NBV8 401 aa8□□□□□ -1.13
TRAF1-202ENST00000540010 OR4X2Q8NGF9 303 aa8□□□□□ -1.13
TRAF1-202ENST00000540010 MS4A6AQ9H2W1 248 aa8□□□□□ -1.13
TRAF1-202ENST00000540010 NPIPB6E9PJ23 425 aa7.99□□□□□ -1.13
TRAF1-202ENST00000540010 K7EN84 100 aa7.99□□□□□ -1.13
TRAF1-202ENST00000540010 ATP5J2P56134 94 aa7.99□□□□□ -1.13
TRAF1-202ENST00000540010 CD300EQ496F6 205 aaPredicted RBP7.99□□□□□ -1.13
TRAF1-202ENST00000540010 ZC2HC1BQ5TFG8 222 aa7.99□□□□□ -1.13
TRAF1-202ENST00000540010 SAMD5Q5TGI4 173 aa7.99□□□□□ -1.13
TRAF1-202ENST00000540010 DDB2Q92466 427 aa7.99□□□□□ -1.13
TRAF1-202ENST00000540010 NXT2Q9NPJ8 142 aaKnown RBP7.99□□□□□ -1.13
TRAF1-202ENST00000540010 CTSZQ9UBR2 303 aa7.99□□□□□ -1.13
TRAF1-202ENST00000540010 CCDC168Q8NDH2 2452 aa7.99□□□□□ -1.13
TRAF1-202ENST00000540010 WT1-ASQ06250 92 aa7.99□□□□□ -1.13
TRAF1-202ENST00000540010 C15orf32Q32M92 178 aa7.99□□□□□ -1.13
TRAF1-202ENST00000540010 ODF3L1Q8IXM7 274 aa7.99□□□□□ -1.13
TRAF1-202ENST00000540010 ZNF479Q96JC4 524 aa7.99□□□□□ -1.13
TRAF1-202ENST00000540010 TANC2Q9HCD6 1990 aa7.99□□□□□ -1.13
TRAF1-202ENST00000540010 TMEM213A2RRL7 107 aa7.99□□□□□ -1.13
TRAF1-202ENST00000540010 IGKCP01834 107 aa7.99□□□□□ -1.13
TRAF1-202ENST00000540010 DIAPH2-AS1Q14236 149 aa7.99□□□□□ -1.13
TRAF1-202ENST00000540010 ZNF295-AS1Q8N0V1 137 aa7.99□□□□□ -1.13
TRAF1-202ENST00000540010 GNLYP22749 145 aa7.99□□□□□ -1.13
TRAF1-202ENST00000540010 TPSG1Q9NRR2 321 aa7.99□□□□□ -1.13
TRAF1-202ENST00000540010 PPBPP02775 128 aa7.98□□□□□ -1.13
TRAF1-202ENST00000540010 LOXP28300 417 aaPredicted RBP7.98□□□□□ -1.13
TRAF1-202ENST00000540010 NDPQ00604 133 aa7.98□□□□□ -1.13
TRAF1-202ENST00000540010 HSD52Q0P140 79 aa7.98□□□□□ -1.13
TRAF1-202ENST00000540010 VWC2Q2TAL6 325 aa7.98□□□□□ -1.13
TRAF1-202ENST00000540010 SAMD13Q5VXD3 122 aa7.98□□□□□ -1.13
TRAF1-202ENST00000540010 PRORYQ9H606 182 aa7.98□□□□□ -1.13
TRAF1-202ENST00000540010 GEMIN7Q9H840 131 aaKnown RBP7.98□□□□□ -1.13
TRAF1-202ENST00000540010 SETD2Q9BYW2 2564 aaPredicted RBP7.98□□□□□ -1.13
TRAF1-202ENST00000540010 NBEAQ8NFP9 2946 aa7.98□□□□□ -1.13
TRAF1-202ENST00000540010 CYSLTR1Q9Y271 337 aa7.98□□□□□ -1.13
TRAF1-202ENST00000540010 TOMM40O96008 361 aa7.98□□□□□ -1.13
TRAF1-202ENST00000540010 FRMD6-AS1P0C7T7 363 aa7.98□□□□□ -1.13
TRAF1-202ENST00000540010 TMEM219Q86XT9 240 aa7.98□□□□□ -1.13
TRAF1-202ENST00000540010 IGHV3-64A0A075B6Q5 118 aa7.97□□□□□ -1.13
TRAF1-202ENST00000540010 SH2D1AO60880 128 aa7.97□□□□□ -1.13
TRAF1-202ENST00000540010 CD7P09564 240 aa7.97□□□□□ -1.13
TRAF1-202ENST00000540010 SRSF1Q07955 248 aaKnown RBP eCLIP7.97□□□□□ -1.13
TRAF1-202ENST00000540010 TTC32Q5I0X7 151 aa7.97□□□□□ -1.13
TRAF1-202ENST00000540010 LCNL1Q6ZST4 164 aa7.97□□□□□ -1.13
TRAF1-202ENST00000540010 MRPS16Q9Y3D3 137 aaKnown RBP7.97□□□□□ -1.13
TRAF1-202ENST00000540010 IGKV3D-20A0A0C4DH25 116 aa7.97□□□□□ -1.13
TRAF1-202ENST00000540010 P0C879 139 aa7.97□□□□□ -1.13
TRAF1-202ENST00000540010 KIR3DS1Q14943 382 aa7.97□□□□□ -1.13
TRAF1-202ENST00000540010 C1orf229Q6ZS94 237 aaPredicted RBP7.97□□□□□ -1.13
TRAF1-202ENST00000540010 PYGO2Q9BRQ0 406 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms