RNA–Protein interactions for RNA: ENST00000539960.1

PRPF19-204, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 796 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-204ENST00000539960 PRELID1Q9Y255 219 aa9.75□□□□□ -0.85
PRPF19-204ENST00000539960 PRAC2D3DTV9 90 aa9.74□□□□□ -0.85
PRPF19-204ENST00000539960 AMBPP02760 352 aa9.74□□□□□ -0.85
PRPF19-204ENST00000539960 ZNF345Q14585 488 aa9.74□□□□□ -0.85
PRPF19-204ENST00000539960 KHDC3LQ587J8 217 aa9.74□□□□□ -0.85
PRPF19-204ENST00000539960 FAM122CQ6P4D5 195 aa9.74□□□□□ -0.85
PRPF19-204ENST00000539960 OR10J6PQ8NGY7 276 aa9.74□□□□□ -0.85
PRPF19-204ENST00000539960 MRPL53Q96EL3 112 aaKnown RBP9.74□□□□□ -0.85
PRPF19-204ENST00000539960 X6R8D5 127 aa9.74□□□□□ -0.85
PRPF19-204ENST00000539960 A0A0D9SG52 128 aa9.73□□□□□ -0.85
PRPF19-204ENST00000539960 M0R3E3 92 aa9.73□□□□□ -0.85
PRPF19-204ENST00000539960 EIF3GO75821 320 aaKnown RBP eCLIP9.73□□□□□ -0.85
PRPF19-204ENST00000539960 MIFP14174 115 aa9.73□□□□□ -0.85
PRPF19-204ENST00000539960 ICAM4Q14773 271 aa9.73□□□□□ -0.85
PRPF19-204ENST00000539960 ZNF705AQ6ZN79 300 aaPredicted RBP9.73□□□□□ -0.85
PRPF19-204ENST00000539960 PQLC2Q6ZP29 291 aa9.73□□□□□ -0.85
PRPF19-204ENST00000539960 EXOC3-AS1Q8N2X6 119 aa9.73□□□□□ -0.85
PRPF19-204ENST00000539960 IGF2BP2-AS1Q96M15 143 aa9.73□□□□□ -0.85
PRPF19-204ENST00000539960 ARPC5LQ9BPX5 153 aa9.73□□□□□ -0.85
PRPF19-204ENST00000539960 AAMDCQ9H7C9 122 aa9.73□□□□□ -0.85
PRPF19-204ENST00000539960 PPP1R14DQ9NXH3 145 aa9.73□□□□□ -0.85
PRPF19-204ENST00000539960 BOLA2-SMG1P6H3BVE0 249 aa9.72□□□□□ -0.85
PRPF19-204ENST00000539960 M0R2Z0 102 aa9.72□□□□□ -0.85
PRPF19-204ENST00000539960 DEFB4AO15263 64 aa9.72□□□□□ -0.85
PRPF19-204ENST00000539960 CDC34P49427 236 aaPredicted RBP9.72□□□□□ -0.85
PRPF19-204ENST00000539960 RANP62826 216 aaKnown RBP9.72□□□□□ -0.85
PRPF19-204ENST00000539960 UBE2L3P68036 154 aaKnown RBP9.72□□□□□ -0.85
PRPF19-204ENST00000539960 SPINK13Q1W4C9 94 aa9.72□□□□□ -0.85
PRPF19-204ENST00000539960 CASC10Q5T4H9 136 aa9.72□□□□□ -0.85
PRPF19-204ENST00000539960 C1orf158Q8N1D5 194 aa9.72□□□□□ -0.85
PRPF19-204ENST00000539960 LYPD1Q8N2G4 141 aa9.72□□□□□ -0.85
PRPF19-204ENST00000539960 Q8NAQ8 132 aa9.72□□□□□ -0.85
PRPF19-204ENST00000539960 PHYHIPLQ96FC7 376 aa9.72□□□□□ -0.85
PRPF19-204ENST00000539960 NEU1Q99519 415 aa9.72□□□□□ -0.85
PRPF19-204ENST00000539960 C11orf68Q9H3H3 251 aaKnown RBP9.72□□□□□ -0.85
PRPF19-204ENST00000539960 IGHV4-28A0A0C4DH34 117 aa9.71□□□□□ -0.86
PRPF19-204ENST00000539960 SMIM9A6NGZ8 99 aa9.71□□□□□ -0.86
PRPF19-204ENST00000539960 HMGB3O15347 200 aaKnown RBP9.71□□□□□ -0.86
PRPF19-204ENST00000539960 CRXO43186 299 aaPredicted RBP9.71□□□□□ -0.86
PRPF19-204ENST00000539960 RBMY1A1P0DJD3 496 aaKnown RBP9.71□□□□□ -0.86
PRPF19-204ENST00000539960 RBMY1CP0DJD4 496 aa9.71□□□□□ -0.86
PRPF19-204ENST00000539960 RBMY1FQ15415 496 aaKnown RBP9.71□□□□□ -0.86
PRPF19-204ENST00000539960 ZFAND6Q6FIF0 208 aa9.71□□□□□ -0.86
PRPF19-204ENST00000539960 TCTE3Q8IZS6 198 aa9.71□□□□□ -0.86
PRPF19-204ENST00000539960 RAB24Q969Q5 203 aa9.71□□□□□ -0.86
PRPF19-204ENST00000539960 ACTR3CQ9C0K3 210 aaPredicted RBP9.71□□□□□ -0.86
PRPF19-204ENST00000539960 GOLT1BQ9Y3E0 138 aa9.71□□□□□ -0.86
PRPF19-204ENST00000539960 IGHV3OR16-12A0A075B7B8 117 aa9.7□□□□□ -0.86
PRPF19-204ENST00000539960 NPIPB6E9PJ23 425 aa9.7□□□□□ -0.86
PRPF19-204ENST00000539960 STAG3L2P0CL84 134 aa9.7□□□□□ -0.86
PRPF19-204ENST00000539960 STAG3L3P0CL85 134 aa9.7□□□□□ -0.86
PRPF19-204ENST00000539960 CT45A10P0DMU9 189 aa9.7□□□□□ -0.86
PRPF19-204ENST00000539960 LINC00477Q96M19 166 aa9.7□□□□□ -0.86
PRPF19-204ENST00000539960 Q9H3A6 140 aa9.7□□□□□ -0.86
PRPF19-204ENST00000539960 hCG_2014768A0A024R1R8 64 aa9.69□□□□□ -0.86
PRPF19-204ENST00000539960 TRAV12-2A0A075B6T6 113 aa9.69□□□□□ -0.86
PRPF19-204ENST00000539960 KANTRA0A1W2PQU2 76 aa9.69□□□□□ -0.86
PRPF19-204ENST00000539960 ARL14EPLP0DKL9 152 aa9.69□□□□□ -0.86
PRPF19-204ENST00000539960 TSPOP30536 169 aa9.69□□□□□ -0.86
PRPF19-204ENST00000539960 CDKN1BP46527 198 aa9.69□□□□□ -0.86
PRPF19-204ENST00000539960 ERCC8Q13216 396 aa9.69□□□□□ -0.86
PRPF19-204ENST00000539960 TMUB2Q71RG4 321 aa9.69□□□□□ -0.86
PRPF19-204ENST00000539960 ODF3Q96PU9 254 aa9.69□□□□□ -0.86
PRPF19-204ENST00000539960 AGPAT4-IT1Q9H0P7 198 aa9.69□□□□□ -0.86
PRPF19-204ENST00000539960 PGPA6NDG6 321 aa9.68□□□□□ -0.86
PRPF19-204ENST00000539960 BCL2L11O43521 198 aa9.68□□□□□ -0.86
PRPF19-204ENST00000539960 CXorf1O96002 111 aa9.68□□□□□ -0.86
PRPF19-204ENST00000539960 INSP01308 110 aa9.68□□□□□ -0.86
PRPF19-204ENST00000539960 GCHFRP30047 84 aa9.68□□□□□ -0.86
PRPF19-204ENST00000539960 CSN1S1P47710 185 aa9.68□□□□□ -0.86
PRPF19-204ENST00000539960 AKR1C8PQ5T2L2 129 aa9.68□□□□□ -0.86
PRPF19-204ENST00000539960 C9orf47Q6ZRZ4 202 aa9.68□□□□□ -0.86
PRPF19-204ENST00000539960 BAP18Q8IXM2 172 aa9.68□□□□□ -0.86
PRPF19-204ENST00000539960 C11orf45Q8TAV5 145 aa9.68□□□□□ -0.86
PRPF19-204ENST00000539960 SUN5Q8TC36 379 aa9.68□□□□□ -0.86
PRPF19-204ENST00000539960 TMEM208Q9BTX3 173 aa9.68□□□□□ -0.86
PRPF19-204ENST00000539960 IGKV2-40A0A087WW87 121 aaPredicted RBP9.67□□□□□ -0.86
PRPF19-204ENST00000539960 IGKV2D-40P01614 121 aaPredicted RBP9.67□□□□□ -0.86
PRPF19-204ENST00000539960 HBE1P02100 147 aa9.67□□□□□ -0.86
PRPF19-204ENST00000539960 C1QBP02746 253 aa9.67□□□□□ -0.86
PRPF19-204ENST00000539960 ZNF726P1Q15940 193 aa9.67□□□□□ -0.86
PRPF19-204ENST00000539960 LGALSLQ3ZCW2 172 aaPredicted RBP9.67□□□□□ -0.86
PRPF19-204ENST00000539960 AKAP14Q86UN6 197 aa9.67□□□□□ -0.86
PRPF19-204ENST00000539960 RXFP4Q8TDU9 374 aa9.67□□□□□ -0.86
PRPF19-204ENST00000539960 VGLL1Q99990 258 aa9.67□□□□□ -0.86
PRPF19-204ENST00000539960 ZNF471Q9BX82 626 aaPredicted RBP9.67□□□□□ -0.86
PRPF19-204ENST00000539960 OTORQ9NRC9 128 aa9.67□□□□□ -0.86
PRPF19-204ENST00000539960 CTXND1A0A1B0GTU2 59 aa9.66□□□□□ -0.86
PRPF19-204ENST00000539960 TMEM189A5PLL7 270 aa9.66□□□□□ -0.86
PRPF19-204ENST00000539960 CXorf65A6NEN9 183 aa9.66□□□□□ -0.86
PRPF19-204ENST00000539960 PFDN1O60925 122 aa9.66□□□□□ -0.86
PRPF19-204ENST00000539960 SEC11BP0C7V7 166 aa9.66□□□□□ -0.86
PRPF19-204ENST00000539960 LEPP41159 167 aa9.66□□□□□ -0.86
PRPF19-204ENST00000539960 EIF5AP63241 154 aaKnown RBP9.66□□□□□ -0.86
PRPF19-204ENST00000539960 KIR3DS1Q14943 382 aa9.66□□□□□ -0.86
PRPF19-204ENST00000539960 RRN3P1Q2M238 152 aa9.66□□□□□ -0.86
PRPF19-204ENST00000539960 FAM74A1Q5RGS3 127 aa9.66□□□□□ -0.86
PRPF19-204ENST00000539960 SSX7Q7RTT5 188 aa9.66□□□□□ -0.86
PRPF19-204ENST00000539960 TMEM256Q8N2U0 113 aa9.66□□□□□ -0.86
PRPF19-204ENST00000539960 ARL6IP6Q8N6S5 226 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms