RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 PARD6GQ9BYG4 376 aaPredicted RBP11.85□□□□□ -0.51
DDB1-215ENST00000539712 OR5AC2Q9NZP5 309 aa11.85□□□□□ -0.51
DDB1-215ENST00000539712 PXMP4Q9Y6I8 212 aa11.85□□□□□ -0.51
DDB1-215ENST00000539712 HTN3P15516 51 aa11.84□□□□□ -0.51
DDB1-215ENST00000539712 FGF7P21781 194 aa11.84□□□□□ -0.51
DDB1-215ENST00000539712 CDKN1BP46527 198 aa11.84□□□□□ -0.51
DDB1-215ENST00000539712 DAD1P61803 113 aa11.84□□□□□ -0.51
DDB1-215ENST00000539712 FCN2Q15485 313 aa11.84□□□□□ -0.51
DDB1-215ENST00000539712 GCSAMLQ5JQS6 135 aa11.84□□□□□ -0.51
DDB1-215ENST00000539712 LINC01587Q99440 93 aa11.84□□□□□ -0.51
DDB1-215ENST00000539712 PFDN5Q99471 154 aa11.84□□□□□ -0.51
DDB1-215ENST00000539712 MARVELD1Q9BSK0 173 aa11.84□□□□□ -0.51
DDB1-215ENST00000539712 NMES1Q9C002 83 aa11.84□□□□□ -0.51
DDB1-215ENST00000539712 GPN1Q9HCN4 374 aaPredicted RBP11.84□□□□□ -0.51
DDB1-215ENST00000539712 DYNC1H1Q14204 4646 aaKnown RBP11.84□□□□□ -0.51
DDB1-215ENST00000539712 LYRM9A8MSI8 78 aa11.83□□□□□ -0.52
DDB1-215ENST00000539712 INMT-MINDY4F8WBC2 141 aa11.83□□□□□ -0.52
DDB1-215ENST00000539712 NDUFB4O95168 129 aa11.83□□□□□ -0.52
DDB1-215ENST00000539712 CT45A10P0DMU9 189 aa11.83□□□□□ -0.52
DDB1-215ENST00000539712 H2BFSP57053 126 aa11.83□□□□□ -0.52
DDB1-215ENST00000539712 TAS2R60P59551 318 aa11.83□□□□□ -0.52
DDB1-215ENST00000539712 GUK1Q16774 197 aa11.83□□□□□ -0.52
DDB1-215ENST00000539712 TMEM88Q6PEY1 159 aa11.83□□□□□ -0.52
DDB1-215ENST00000539712 TMEM256Q8N2U0 113 aa11.83□□□□□ -0.52
DDB1-215ENST00000539712 NPCDR1Q9BY65 106 aa11.83□□□□□ -0.52
DDB1-215ENST00000539712 PPP1R14DQ9NXH3 145 aa11.83□□□□□ -0.52
DDB1-215ENST00000539712 KIAA1109Q2LD37 5005 aa11.83□□□□□ -0.52
DDB1-215ENST00000539712 TRBV19A0A075B6N1 114 aa11.82□□□□□ -0.52
DDB1-215ENST00000539712 PRAF2O60831 178 aa11.82□□□□□ -0.52
DDB1-215ENST00000539712 ZNF253O75346 499 aa11.82□□□□□ -0.52
DDB1-215ENST00000539712 OR5C1Q8NGR4 320 aa11.82□□□□□ -0.52
DDB1-215ENST00000539712 THAP6Q8TBB0 222 aa11.82□□□□□ -0.52
DDB1-215ENST00000539712 TMEM14CQ9P0S9 112 aa11.82□□□□□ -0.52
DDB1-215ENST00000539712 E5RGE8 158 aa11.81□□□□□ -0.52
DDB1-215ENST00000539712 NPIPB6E9PJ23 425 aa11.81□□□□□ -0.52
DDB1-215ENST00000539712 MPDU1O75352 247 aa11.81□□□□□ -0.52
DDB1-215ENST00000539712 GFI1BQ5VTD9 330 aa11.81□□□□□ -0.52
DDB1-215ENST00000539712 RNASE8Q8TDE3 154 aaKnown RBP11.81□□□□□ -0.52
DDB1-215ENST00000539712 FAM167A-AS1Q96KT0 104 aa11.81□□□□□ -0.52
DDB1-215ENST00000539712 DNAH11Q96DT5 4516 aa11.8□□□□□ -0.52
DDB1-215ENST00000539712 M0R3E3 92 aa11.8□□□□□ -0.52
DDB1-215ENST00000539712 DEFB130BP0DP73 79 aa11.8□□□□□ -0.52
DDB1-215ENST00000539712 DEFB130AP0DP74 79 aa11.8□□□□□ -0.52
DDB1-215ENST00000539712 PYYP10082 97 aa11.8□□□□□ -0.52
DDB1-215ENST00000539712 LRRC37A5PQ49AS3 106 aa11.8□□□□□ -0.52
DDB1-215ENST00000539712 OR10J6PQ8NGY7 276 aa11.8□□□□□ -0.52
DDB1-215ENST00000539712 H7BYZ3 331 aa11.79□□□□□ -0.52
DDB1-215ENST00000539712 HIST1H1EP10412 219 aaKnown RBP11.79□□□□□ -0.52
DDB1-215ENST00000539712 HTN1P15515 57 aa11.79□□□□□ -0.52
DDB1-215ENST00000539712 MRPL53Q96EL3 112 aaKnown RBP11.79□□□□□ -0.52
DDB1-215ENST00000539712 C16orf74Q96GX8 76 aa11.79□□□□□ -0.52
DDB1-215ENST00000539712 ODF3Q96PU9 254 aa11.79□□□□□ -0.52
DDB1-215ENST00000539712 C20orf144Q9BQM9 153 aa11.79□□□□□ -0.52
DDB1-215ENST00000539712 SLC25A2Q9BXI2 301 aa11.79□□□□□ -0.52
DDB1-215ENST00000539712 SLC25A31Q9H0C2 315 aa11.79□□□□□ -0.52
DDB1-215ENST00000539712 RLN2P04090 185 aa11.78□□□□□ -0.52
DDB1-215ENST00000539712 CYCSP99999 105 aaKnown RBP11.78□□□□□ -0.52
DDB1-215ENST00000539712 CLINT1Q14677 625 aa11.78□□□□□ -0.52
DDB1-215ENST00000539712 ZNF493Q6ZR52 646 aa11.78□□□□□ -0.52
DDB1-215ENST00000539712 Q6ZR54 194 aa11.78□□□□□ -0.52
DDB1-215ENST00000539712 MIR17HGQ75NE6 70 aa11.78□□□□□ -0.52
DDB1-215ENST00000539712 PPP1R1CQ8WVI7 109 aa11.78□□□□□ -0.52
DDB1-215ENST00000539712 FAM19A4Q96LR4 140 aa11.78□□□□□ -0.52
DDB1-215ENST00000539712 WDR61Q9GZS3 305 aaKnown RBP11.78□□□□□ -0.52
DDB1-215ENST00000539712 NACAE9PAV3 2078 aa11.78□□□□□ -0.52
DDB1-215ENST00000539712 CBY3A6NI87 242 aa11.77□□□□□ -0.53
DDB1-215ENST00000539712 M0R2N4 97 aa11.77□□□□□ -0.53
DDB1-215ENST00000539712 RTL8CO15255 209 aa11.77□□□□□ -0.53
DDB1-215ENST00000539712 ERCC8Q13216 396 aa11.77□□□□□ -0.53
DDB1-215ENST00000539712 PDE6HQ13956 83 aa11.77□□□□□ -0.53
DDB1-215ENST00000539712 LGALS9BQ3B8N2 356 aa11.77□□□□□ -0.53
DDB1-215ENST00000539712 RNF212Q495C1 297 aa11.77□□□□□ -0.53
DDB1-215ENST00000539712 EXOC3-AS1Q8N2X6 119 aa11.77□□□□□ -0.53
DDB1-215ENST00000539712 LINC00612Q8N6U2 182 aa11.77□□□□□ -0.53
DDB1-215ENST00000539712 TMEM263Q8WUH6 116 aaKnown RBP11.77□□□□□ -0.53
DDB1-215ENST00000539712 NOP10Q9NPE3 64 aaKnown RBP11.77□□□□□ -0.53
DDB1-215ENST00000539712 TIMM8BQ9Y5J9 83 aaPredicted RBP11.77□□□□□ -0.53
DDB1-215ENST00000539712 A0A1B0GVY2 172 aa11.76□□□□□ -0.53
DDB1-215ENST00000539712 MPC2O95563 127 aa11.76□□□□□ -0.53
DDB1-215ENST00000539712 AGPAT4-IT1Q9H0P7 198 aa11.76□□□□□ -0.53
DDB1-215ENST00000539712 TRAV12-3A0A0B4J271 114 aa11.75□□□□□ -0.53
DDB1-215ENST00000539712 F5H768 121 aa11.75□□□□□ -0.53
DDB1-215ENST00000539712 J3KRW8 73 aa11.75□□□□□ -0.53
DDB1-215ENST00000539712 BLNKQ8WV28 456 aa11.75□□□□□ -0.53
DDB1-215ENST00000539712 FXYD5Q96DB9 178 aa11.75□□□□□ -0.53
DDB1-215ENST00000539712 PRELID1Q9Y255 219 aa11.75□□□□□ -0.53
DDB1-215ENST00000539712 TIMM9Q9Y5J7 89 aa11.75□□□□□ -0.53
DDB1-215ENST00000539712 IGLV2-18A0A075B6J9 118 aa11.74□□□□□ -0.53
DDB1-215ENST00000539712 KLLNB2CW77 178 aa11.74□□□□□ -0.53
DDB1-215ENST00000539712 ZNF324O75467 553 aaPredicted RBP11.74□□□□□ -0.53
DDB1-215ENST00000539712 ATP5G1P05496 136 aa11.74□□□□□ -0.53
DDB1-215ENST00000539712 LEPP41159 167 aa11.74□□□□□ -0.53
DDB1-215ENST00000539712 ATP5G3P48201 142 aa11.74□□□□□ -0.53
DDB1-215ENST00000539712 LINC00336Q6ZUF6 198 aa11.74□□□□□ -0.53
DDB1-215ENST00000539712 C15orf53Q8NAA6 179 aa11.74□□□□□ -0.53
DDB1-215ENST00000539712 ZNF503Q96F45 646 aa11.74□□□□□ -0.53
DDB1-215ENST00000539712 SSNA1O43805 119 aa11.73□□□□□ -0.53
DDB1-215ENST00000539712 NBEAP1P0C6P0 100 aa11.73□□□□□ -0.53
DDB1-215ENST00000539712 DEFA1P59665 94 aa11.73□□□□□ -0.53
DDB1-215ENST00000539712 DEFA3P59666 94 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms