RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 C10orf91Q5T1B1 145 aa11.67□□□□□ -0.54
CACNB1-206ENST00000539338 ZNF114Q8NC26 417 aa11.67□□□□□ -0.54
CACNB1-206ENST00000539338 TMEM190Q8WZ59 177 aa11.67□□□□□ -0.54
CACNB1-206ENST00000539338 SHANK1Q9Y566 2161 aa11.67□□□□□ -0.54
CACNB1-206ENST00000539338 NOTCH3Q9UM47 2321 aa11.67□□□□□ -0.54
CACNB1-206ENST00000539338 TMEM213A2RRL7 107 aa11.67□□□□□ -0.54
CACNB1-206ENST00000539338 MMP23AO75900 390 aa11.67□□□□□ -0.54
CACNB1-206ENST00000539338 PLNP26678 52 aa11.67□□□□□ -0.54
CACNB1-206ENST00000539338 RCHY1Q96PM5 261 aa11.67□□□□□ -0.54
CACNB1-206ENST00000539338 GGTLC3B5MD39 225 aa11.67□□□□□ -0.54
CACNB1-206ENST00000539338 MTURNQ8N3F0 131 aa11.67□□□□□ -0.54
CACNB1-206ENST00000539338 LINC00477Q96M19 166 aa11.67□□□□□ -0.54
CACNB1-206ENST00000539338 GATA4P43694 442 aa11.67□□□□□ -0.54
CACNB1-206ENST00000539338 Q0VG73 95 aa11.67□□□□□ -0.54
CACNB1-206ENST00000539338 ASPHD1Q5U4P2 390 aa11.67□□□□□ -0.54
CACNB1-206ENST00000539338 C18orf32Q8TCD1 76 aa11.67□□□□□ -0.54
CACNB1-206ENST00000539338 C15orf65H3BRN8 121 aa11.66□□□□□ -0.54
CACNB1-206ENST00000539338 C8orf49Q96NF6 230 aa11.66□□□□□ -0.54
CACNB1-206ENST00000539338 RHPN1-AS1Q9BWJ2 59 aa11.66□□□□□ -0.54
CACNB1-206ENST00000539338 ZC2HC1BQ5TFG8 222 aa11.66□□□□□ -0.54
CACNB1-206ENST00000539338 ZNF833PQ6ZTB9 187 aa11.66□□□□□ -0.54
CACNB1-206ENST00000539338 CSTL1Q9H114 145 aa11.66□□□□□ -0.54
CACNB1-206ENST00000539338 TPSG1Q9NRR2 321 aa11.66□□□□□ -0.54
CACNB1-206ENST00000539338 CFHR2P36980 270 aa11.66□□□□□ -0.54
CACNB1-206ENST00000539338 A0A087WWL8 130 aa11.65□□□□□ -0.54
CACNB1-206ENST00000539338 GAGE13Q4V321 117 aa11.65□□□□□ -0.54
CACNB1-206ENST00000539338 RUSC1-AS1Q66K80 236 aa11.65□□□□□ -0.54
CACNB1-206ENST00000539338 CHCHD5Q9BSY4 110 aa11.65□□□□□ -0.54
CACNB1-206ENST00000539338 RBMY1BA6NDE4 496 aaKnown RBP11.65□□□□□ -0.54
CACNB1-206ENST00000539338 RBMY1EA6NEQ0 496 aaKnown RBP11.65□□□□□ -0.54
CACNB1-206ENST00000539338 NDUFB8O95169 186 aa11.65□□□□□ -0.54
CACNB1-206ENST00000539338 RBMY1DP0C7P1 496 aaKnown RBP11.65□□□□□ -0.54
CACNB1-206ENST00000539338 RBMY1A1P0DJD3 496 aaKnown RBP11.65□□□□□ -0.54
CACNB1-206ENST00000539338 RBMY1CP0DJD4 496 aa11.65□□□□□ -0.54
CACNB1-206ENST00000539338 IL15RAQ13261 267 aa11.65□□□□□ -0.54
CACNB1-206ENST00000539338 Q8TCH9 128 aa11.65□□□□□ -0.54
CACNB1-206ENST00000539338 A8MWP6 167 aa11.65□□□□□ -0.54
CACNB1-206ENST00000539338 OVOL3O00110 214 aa11.65□□□□□ -0.54
CACNB1-206ENST00000539338 MALP21145 153 aa11.65□□□□□ -0.54
CACNB1-206ENST00000539338 ZNF562Q6V9R5 426 aa11.65□□□□□ -0.54
CACNB1-206ENST00000539338 WT1-ASQ06250 92 aa11.65□□□□□ -0.55
CACNB1-206ENST00000539338 DIAPH2-AS1Q14236 149 aa11.65□□□□□ -0.55
CACNB1-206ENST00000539338 STPG4Q8N801 248 aa11.65□□□□□ -0.55
CACNB1-206ENST00000539338 GFRA4Q9GZZ7 299 aa11.65□□□□□ -0.55
CACNB1-206ENST00000539338 LOXP28300 417 aaPredicted RBP11.64□□□□□ -0.55
CACNB1-206ENST00000539338 LINC01559Q495D7 138 aa11.64□□□□□ -0.55
CACNB1-206ENST00000539338 PIP4P2Q8N4L2 257 aa11.64□□□□□ -0.55
CACNB1-206ENST00000539338 C1QTNF4Q9BXJ3 329 aa11.64□□□□□ -0.55
CACNB1-206ENST00000539338 ATP6V0E1O15342 81 aa11.64□□□□□ -0.55
CACNB1-206ENST00000539338 VGLL1Q99990 258 aa11.64□□□□□ -0.55
CACNB1-206ENST00000539338 ADARB2-AS1A8MUL3 147 aa11.64□□□□□ -0.55
CACNB1-206ENST00000539338 TDGF1P3P51864 188 aa11.64□□□□□ -0.55
CACNB1-206ENST00000539338 PDE6HQ13956 83 aa11.63□□□□□ -0.55
CACNB1-206ENST00000539338 SRSF8Q9BRL6 282 aaKnown RBP11.63□□□□□ -0.55
CACNB1-206ENST00000539338 ERG28Q9UKR5 140 aa11.63□□□□□ -0.55
CACNB1-206ENST00000539338 DENND4CQ5VZ89 1909 aa11.63□□□□□ -0.55
CACNB1-206ENST00000539338 IGHV3-53P01767 116 aa11.63□□□□□ -0.55
CACNB1-206ENST00000539338 V9GYV3 84 aa11.63□□□□□ -0.55
CACNB1-206ENST00000539338 A8MWV9 139 aa11.63□□□□□ -0.55
CACNB1-206ENST00000539338 TNFRSF6BO95407 300 aa11.63□□□□□ -0.55
CACNB1-206ENST00000539338 USMG5Q96IX5 58 aa11.63□□□□□ -0.55
CACNB1-206ENST00000539338 PTPRQQ9UMZ3 2332 aa11.63□□□□□ -0.55
CACNB1-206ENST00000539338 MED13LQ71F56 2210 aa11.63□□□□□ -0.55
CACNB1-206ENST00000539338 VCYO14598 125 aa11.63□□□□□ -0.55
CACNB1-206ENST00000539338 FAM223BA6NKX1 122 aa11.62□□□□□ -0.55
CACNB1-206ENST00000539338 FAM223AQ8IWN6 122 aa11.62□□□□□ -0.55
CACNB1-206ENST00000539338 ZNF492Q9P255 531 aa11.62□□□□□ -0.55
CACNB1-206ENST00000539338 G3V318 75 aa11.62□□□□□ -0.55
CACNB1-206ENST00000539338 PSCAO43653 123 aa11.62□□□□□ -0.55
CACNB1-206ENST00000539338 IGLV1-44P01699 117 aa11.62□□□□□ -0.55
CACNB1-206ENST00000539338 SLAQ13239 276 aa11.62□□□□□ -0.55
CACNB1-206ENST00000539338 KIR3DS1Q14943 382 aa11.62□□□□□ -0.55
CACNB1-206ENST00000539338 LCNL1Q6ZST4 164 aa11.62□□□□□ -0.55
CACNB1-206ENST00000539338 TMEM75Q8N9X5 138 aa11.62□□□□□ -0.55
CACNB1-206ENST00000539338 BDP1A6H8Y1 2624 aa11.62□□□□□ -0.55
CACNB1-206ENST00000539338 TRBV19A0A075B6N1 114 aa11.62□□□□□ -0.55
CACNB1-206ENST00000539338 TRGV1A0A0A0MS02 117 aa11.62□□□□□ -0.55
CACNB1-206ENST00000539338 IGHV2-5P01817 119 aa11.62□□□□□ -0.55
CACNB1-206ENST00000539338 TECTAO75443 2155 aa11.62□□□□□ -0.55
CACNB1-206ENST00000539338 IL17RELQ6ZVW7 336 aa11.62□□□□□ -0.55
CACNB1-206ENST00000539338 Q8NFD4 153 aa11.62□□□□□ -0.55
CACNB1-206ENST00000539338 LINC01549A6NIU2 74 aa11.61□□□□□ -0.55
CACNB1-206ENST00000539338 IGLV3-9A0A075B6K5 115 aa11.61□□□□□ -0.55
CACNB1-206ENST00000539338 C11orf68Q9H3H3 251 aaKnown RBP11.61□□□□□ -0.55
CACNB1-206ENST00000539338 M0R2P5 195 aa11.61□□□□□ -0.55
CACNB1-206ENST00000539338 Q6ZWC4 215 aa11.61□□□□□ -0.55
CACNB1-206ENST00000539338 TMEM238C9JI98 176 aa11.61□□□□□ -0.55
CACNB1-206ENST00000539338 APOC4P55056 127 aa11.61□□□□□ -0.55
CACNB1-206ENST00000539338 SIGMAR1Q99720 223 aa11.61□□□□□ -0.55
CACNB1-206ENST00000539338 FAM215AQ9Y5M1 114 aa11.61□□□□□ -0.55
CACNB1-206ENST00000539338 DAZ1Q9NQZ3 744 aaKnown RBP11.6□□□□□ -0.55
CACNB1-206ENST00000539338 SYNJ2BPP57105 145 aa11.6□□□□□ -0.55
CACNB1-206ENST00000539338 LINC00158P58513 81 aa11.6□□□□□ -0.55
CACNB1-206ENST00000539338 YPEL3P61236 119 aaPredicted RBP11.6□□□□□ -0.55
CACNB1-206ENST00000539338 UBE2E2Q96LR5 201 aa11.6□□□□□ -0.55
CACNB1-206ENST00000539338 NCOR1P1Q9H4R4 102 aa11.6□□□□□ -0.55
CACNB1-206ENST00000539338 IGHV1-69DA0A0B4J2H0 117 aa11.6□□□□□ -0.55
CACNB1-206ENST00000539338 IGHV1-69P01742 117 aa11.6□□□□□ -0.55
CACNB1-206ENST00000539338 UBE2V1Q13404 147 aa11.6□□□□□ -0.55
CACNB1-206ENST00000539338 TEX43Q6ZNM6 134 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms