RNA–Protein interactions for RNA: ENST00000539318.5

NPIPB4-211, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 695 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-211ENST00000539318 HMGB3O15347 200 aaKnown RBP6.55□□□□□ -1.36
NPIPB4-211ENST00000539318 OR7C2O60412 319 aa6.55□□□□□ -1.36
NPIPB4-211ENST00000539318 NHLRC4P0CG21 123 aaPredicted RBP6.55□□□□□ -1.36
NPIPB4-211ENST00000539318 RPL35AP18077 110 aaKnown RBP6.55□□□□□ -1.36
NPIPB4-211ENST00000539318 FHITP49789 147 aa6.55□□□□□ -1.36
NPIPB4-211ENST00000539318 AKR1C8PQ5T2L2 129 aa6.55□□□□□ -1.36
NPIPB4-211ENST00000539318 AMTNQ6UX39 209 aa6.55□□□□□ -1.36
NPIPB4-211ENST00000539318 LYPD1Q8N2G4 141 aa6.55□□□□□ -1.36
NPIPB4-211ENST00000539318 EXOC3-AS1Q8N2X6 119 aa6.55□□□□□ -1.36
NPIPB4-211ENST00000539318 BLNKQ8WV28 456 aa6.55□□□□□ -1.36
NPIPB4-211ENST00000539318 TMED6Q8WW62 240 aa6.55□□□□□ -1.36
NPIPB4-211ENST00000539318 MBD3L1Q8WWY6 194 aa6.55□□□□□ -1.36
NPIPB4-211ENST00000539318 CSTL1Q9H114 145 aa6.55□□□□□ -1.36
NPIPB4-211ENST00000539318 M0R3E3 92 aa6.54□□□□□ -1.36
NPIPB4-211ENST00000539318 UBE2CO00762 179 aa6.54□□□□□ -1.36
NPIPB4-211ENST00000539318 CXorf1O96002 111 aa6.54□□□□□ -1.36
NPIPB4-211ENST00000539318 ZNF705DP0CH99 300 aaPredicted RBP6.54□□□□□ -1.36
NPIPB4-211ENST00000539318 ZNF705BP0CI00 300 aaPredicted RBP6.54□□□□□ -1.36
NPIPB4-211ENST00000539318 ARL14EPLP0DKL9 152 aa6.54□□□□□ -1.36
NPIPB4-211ENST00000539318 GCHFRP30047 84 aa6.54□□□□□ -1.36
NPIPB4-211ENST00000539318 PSG9Q00887 426 aa6.54□□□□□ -1.36
NPIPB4-211ENST00000539318 STHQ8IWL8 128 aa6.54□□□□□ -1.36
NPIPB4-211ENST00000539318 CSNK1G2-AS1Q8NCQ2 148 aa6.54□□□□□ -1.36
NPIPB4-211ENST00000539318 OR8A1Q8NGG7 326 aa6.54□□□□□ -1.36
NPIPB4-211ENST00000539318 LRRC20Q8TCA0 184 aa6.54□□□□□ -1.36
NPIPB4-211ENST00000539318 RPUSD4Q96CM3 377 aaKnown RBP6.54□□□□□ -1.36
NPIPB4-211ENST00000539318 MRPL53Q96EL3 112 aaKnown RBP6.54□□□□□ -1.36
NPIPB4-211ENST00000539318 PHYHIPLQ96FC7 376 aa6.54□□□□□ -1.36
NPIPB4-211ENST00000539318 PRELID1Q9Y255 219 aa6.54□□□□□ -1.36
NPIPB4-211ENST00000539318 PRB4P10163 310 aaPredicted RBP6.53□□□□□ -1.36
NPIPB4-211ENST00000539318 C4BPBP20851 252 aa6.53□□□□□ -1.36
NPIPB4-211ENST00000539318 SULT1A2P50226 295 aa6.53□□□□□ -1.36
NPIPB4-211ENST00000539318 CNN1P51911 297 aaKnown RBP6.53□□□□□ -1.36
NPIPB4-211ENST00000539318 APOC4P55056 127 aa6.53□□□□□ -1.36
NPIPB4-211ENST00000539318 RANP62826 216 aaKnown RBP6.53□□□□□ -1.36
NPIPB4-211ENST00000539318 UBE2L3P68036 154 aaKnown RBP6.53□□□□□ -1.36
NPIPB4-211ENST00000539318 ICAM4Q14773 271 aa6.53□□□□□ -1.36
NPIPB4-211ENST00000539318 EBLN2Q6P2I7 272 aa6.53□□□□□ -1.36
NPIPB4-211ENST00000539318 MORN3Q6PF18 240 aaPredicted RBP6.53□□□□□ -1.36
NPIPB4-211ENST00000539318 DPPA3Q6W0C5 159 aa6.53□□□□□ -1.36
NPIPB4-211ENST00000539318 Q6ZWC4 215 aa6.53□□□□□ -1.36
NPIPB4-211ENST00000539318 ARL6IP6Q8N6S5 226 aa6.53□□□□□ -1.36
NPIPB4-211ENST00000539318 ZNF738Q8NE65 137 aa6.53□□□□□ -1.36
NPIPB4-211ENST00000539318 OVOL2Q9BRP0 275 aa6.53□□□□□ -1.36
NPIPB4-211ENST00000539318 TMPRSS5Q9H3S3 457 aa6.53□□□□□ -1.36
NPIPB4-211ENST00000539318 TRAV1-1A0A0B4J248 108 aa6.52□□□□□ -1.37
NPIPB4-211ENST00000539318 DUSP14O95147 198 aaKnown RBP6.52□□□□□ -1.37
NPIPB4-211ENST00000539318 RAB5CP51148 216 aa6.52□□□□□ -1.37
NPIPB4-211ENST00000539318 EIF5AL1Q6IS14 154 aaKnown RBP6.52□□□□□ -1.37
NPIPB4-211ENST00000539318 RNF183Q96D59 192 aa6.52□□□□□ -1.37
NPIPB4-211ENST00000539318 Q9H3A6 140 aa6.52□□□□□ -1.37
NPIPB4-211ENST00000539318 TMEM167BQ9NRX6 74 aa6.52□□□□□ -1.37
NPIPB4-211ENST00000539318 TP53TG1Q9Y2A0 90 aa6.52□□□□□ -1.37
NPIPB4-211ENST00000539318 LOC100996750A0A140TA64 210 aa6.51□□□□□ -1.37
NPIPB4-211ENST00000539318 A0A1W2PRE2 83 aa6.51□□□□□ -1.37
NPIPB4-211ENST00000539318 MAP1LC3B2A6NCE7 125 aa6.51□□□□□ -1.37
NPIPB4-211ENST00000539318 PGPA6NDG6 321 aa6.51□□□□□ -1.37
NPIPB4-211ENST00000539318 NPIPB6E9PJ23 425 aa6.51□□□□□ -1.37
NPIPB4-211ENST00000539318 CRXO43186 299 aaPredicted RBP6.51□□□□□ -1.37
NPIPB4-211ENST00000539318 CT45A10P0DMU9 189 aa6.51□□□□□ -1.37
NPIPB4-211ENST00000539318 FGF8P55075 233 aaPredicted RBP6.51□□□□□ -1.37
NPIPB4-211ENST00000539318 C9orf47Q6ZRZ4 202 aa6.51□□□□□ -1.37
NPIPB4-211ENST00000539318 OR4B1Q8NGF8 309 aa6.51□□□□□ -1.37
NPIPB4-211ENST00000539318 FAM213BQ8TBF2 198 aa6.51□□□□□ -1.37
NPIPB4-211ENST00000539318 SFT2D1Q8WV19 159 aa6.51□□□□□ -1.37
NPIPB4-211ENST00000539318 FAM19A4Q96LR4 140 aa6.51□□□□□ -1.37
NPIPB4-211ENST00000539318 SPATA25Q9BR10 227 aa6.51□□□□□ -1.37
NPIPB4-211ENST00000539318 KRTAP4-6Q9BYQ5 205 aa6.51□□□□□ -1.37
NPIPB4-211ENST00000539318 MAP1LC3BQ9GZQ8 125 aa6.51□□□□□ -1.37
NPIPB4-211ENST00000539318 AGPAT4-IT1Q9H0P7 198 aa6.51□□□□□ -1.37
NPIPB4-211ENST00000539318 SLC35B3Q9H1N7 401 aa6.51□□□□□ -1.37
NPIPB4-211ENST00000539318 AAMDCQ9H7C9 122 aa6.51□□□□□ -1.37
NPIPB4-211ENST00000539318 OTORQ9NRC9 128 aa6.51□□□□□ -1.37
NPIPB4-211ENST00000539318 DIRC3C9JPN6 131 aa6.5□□□□□ -1.37
NPIPB4-211ENST00000539318 BOLA2-SMG1P6H3BVE0 249 aa6.5□□□□□ -1.37
NPIPB4-211ENST00000539318 SPRY2O43597 315 aa6.5□□□□□ -1.37
NPIPB4-211ENST00000539318 CA1P00915 261 aaPredicted RBP6.5□□□□□ -1.37
NPIPB4-211ENST00000539318 IGKV3-20P01619 116 aa6.5□□□□□ -1.37
NPIPB4-211ENST00000539318 H2AFB1P0C5Y9 115 aa6.5□□□□□ -1.37
NPIPB4-211ENST00000539318 NUTF2P61970 127 aaKnown RBP6.5□□□□□ -1.37
NPIPB4-211ENST00000539318 SUMO1P63165 101 aaKnown RBP6.5□□□□□ -1.37
NPIPB4-211ENST00000539318 CCL20P78556 96 aa6.5□□□□□ -1.37
NPIPB4-211ENST00000539318 HIST1H1AQ02539 215 aaPredicted RBP6.5□□□□□ -1.37
NPIPB4-211ENST00000539318 ERCC8Q13216 396 aa6.5□□□□□ -1.37
NPIPB4-211ENST00000539318 PMS2P11Q13670 270 aa6.5□□□□□ -1.37
NPIPB4-211ENST00000539318 CCDC28AQ8IWP9 274 aa6.5□□□□□ -1.37
NPIPB4-211ENST00000539318 RXFP4Q8TDU9 374 aa6.5□□□□□ -1.37
NPIPB4-211ENST00000539318 LINC00477Q96M19 166 aa6.5□□□□□ -1.37
NPIPB4-211ENST00000539318 VGLL1Q99990 258 aa6.5□□□□□ -1.37
NPIPB4-211ENST00000539318 ZMAT4Q9H898 229 aa6.5□□□□□ -1.37
NPIPB4-211ENST00000539318 RETNQ9HD89 108 aa6.5□□□□□ -1.37
NPIPB4-211ENST00000539318 PPP1R14DQ9NXH3 145 aa6.5□□□□□ -1.37
NPIPB4-211ENST00000539318 YTHDF2Q9Y5A9 579 aaKnown RBP6.5□□□□□ -1.37
NPIPB4-211ENST00000539318 DNAH7Q8WXX0 4024 aa6.49□□□□□ -1.37
NPIPB4-211ENST00000539318 RBAKDNA6NC62 111 aa6.49□□□□□ -1.37
NPIPB4-211ENST00000539318 FAM74A7A6NL05 159 aa6.49□□□□□ -1.37
NPIPB4-211ENST00000539318 ZNF705EA8MWA4 302 aaPredicted RBP6.49□□□□□ -1.37
NPIPB4-211ENST00000539318 GGTLC3B5MD39 225 aa6.49□□□□□ -1.37
NPIPB4-211ENST00000539318 SLC25A5P05141 298 aaKnown RBP6.49□□□□□ -1.37
NPIPB4-211ENST00000539318 FXYD7P58549 80 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms