RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 MROQ9BYG7 248 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 IMUPQ9GZP8 106 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 OTORQ9NRC9 128 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 CELSR1Q9NYQ6 3014 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 HSPB8Q9UJY1 196 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 PYCARDQ9ULZ3 195 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 MED31Q9Y3C7 131 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 LSM5Q9Y4Y9 91 aaKnown RBP0.49□□□□□ -2.33
HIF1A-204ENST00000539097 ABCC6O95255 1503 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 CEP162Q5TB80 1403 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 A6NED7 52 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 KNCNA6PVL3 124 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 A8MWP6 167 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 B4DSR2 109 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 AIPO00170 330 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 TNFSF15O95150 251 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 ATP6V1G2O95670 118 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 SMIM6P0DI80 62 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 CRYBB3P26998 211 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 KLF3P57682 345 aaPredicted RBP0.49□□□□□ -2.33
HIF1A-204ENST00000539097 FXYD7P58549 80 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 MRPL51Q4U2R6 128 aaKnown RBP0.49□□□□□ -2.33
HIF1A-204ENST00000539097 TMEM86AQ8N2M4 240 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 LINC00311Q8N616 119 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 DEFB119Q8N690 84 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 OR9I1Q8NGQ6 314 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 LINC00526Q96FQ7 95 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 OR8D2Q9GZM6 311 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 DUSP21Q9H596 190 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 POPDC3Q9HBV1 291 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 CISHQ9NSE2 258 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 LYRM2Q9NU23 88 aaPredicted RBP0.49□□□□□ -2.33
HIF1A-204ENST00000539097 NAT8BQ9UHF3 227 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 RNF11Q9Y3C5 154 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 GOLGA3Q08378 1498 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 A0A0B4J2C4 111 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 H3BMM0 161 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 GGCTO75223 188 aaKnown RBP0.48□□□□□ -2.33
HIF1A-204ENST00000539097 IGKV1-16P04430 117 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 SERPINE1P05121 402 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 BAALC-AS2P0C853 105 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 ZNF22P17026 224 aaPredicted RBP0.48□□□□□ -2.33
HIF1A-204ENST00000539097 SDC4P31431 198 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 MAGEA12P43365 314 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 ATP5G3P48201 142 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 MIAQ16674 131 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 OCIAD2Q56VL3 154 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 CENPWQ5EE01 88 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 KRTAP5-10Q6L8G5 202 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 RPL13AP3Q6NVV1 102 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 LYZL1Q6UWQ5 148 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 CCDC121Q6ZUS5 278 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 OR52R1Q8NGF1 315 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 OR4C16Q8NGL9 310 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 UBE2WQ96B02 151 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 GNPNAT1Q96EK6 184 aaPredicted RBP0.48□□□□□ -2.33
HIF1A-204ENST00000539097 ABHD14BQ96IU4 210 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 CMSS1Q9BQ75 279 aaKnown RBP0.48□□□□□ -2.33
HIF1A-204ENST00000539097 EFCAB11Q9BUY7 163 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 SNHG12Q9BXW3 62 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 TTTY13Q9BZ97 58 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 TMEM106BQ9NUM4 274 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 DKKL1Q9UK85 242 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 ANAPC10Q9UM13 185 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 POMPQ9Y244 141 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 TTC28Q96AY4 2481 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 OTOGQ6ZRI0 2925 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 BRWD1Q9NSI6 2320 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 CDC42BPAQ5VT25 1732 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 HEATR5BQ9P2D3 2071 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 PTPN13Q12923 2485 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 NBEAQ8NFP9 2946 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 NSD3Q9BZ95 1437 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 TENM2Q9NT68 2774 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 IGLV10-54A0A075B6I4 117 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 TRDV1A0A1B0GX56 115 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 VPS37CA5D8V6 355 aaPredicted RBP0.48□□□□□ -2.33
HIF1A-204ENST00000539097 SDHAF1A6NFY7 115 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 M0R381 172 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 SRP19P09132 144 aaKnown RBP0.48□□□□□ -2.33
HIF1A-204ENST00000539097 RBP1P09455 135 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 DEFA4P12838 97 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 PVALBP20472 110 aaPredicted RBP0.48□□□□□ -2.33
HIF1A-204ENST00000539097 NPY1RP25929 384 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 TCL1AP56279 114 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 LDLRAD2Q5SZI1 272 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 SCIMPQ6UWF3 145 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 SLC35E3Q7Z769 313 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 C10orf107Q8IVU9 208 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 MSRB3Q8IXL7 192 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 C9orf62Q8N4C0 152 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 STX19Q8N4C7 294 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 MAFIPQ8WZ33 124 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 FGF13Q92913 245 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 DPH3Q96FX2 82 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 SERPINI1Q99574 410 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 SIGMAR1Q99720 223 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 SELENOSQ9BQE4 189 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 GSKIPQ9P0R6 139 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 ARL2BPQ9Y2Y0 163 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms