RNA–Protein interactions for RNA: ENST00000539041.5

SMPDL3A-203, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2 BASIC

Gene SMPDL3A, Length 1,755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-203ENST00000539041 IGHG4P01861 327 aa15.87■□□□□ 0.13
SMPDL3A-203ENST00000539041 APOHP02749 345 aaPredicted RBP15.87■□□□□ 0.13
SMPDL3A-203ENST00000539041 HLA-DMBP28068 263 aa15.87■□□□□ 0.13
SMPDL3A-203ENST00000539041 KIAA1644Q3SXP7 199 aa15.87■□□□□ 0.13
SMPDL3A-203ENST00000539041 DNLZQ5SXM8 178 aa15.87■□□□□ 0.13
SMPDL3A-203ENST00000539041 RBPMS2Q6ZRY4 209 aaKnown RBP15.87■□□□□ 0.13
SMPDL3A-203ENST00000539041 VPS13CQ709C8 3753 aa15.87■□□□□ 0.13
SMPDL3A-203ENST00000539041 NUPR1O60356 82 aa15.87■□□□□ 0.13
SMPDL3A-203ENST00000539041 CT45A10P0DMU9 189 aa15.87■□□□□ 0.13
SMPDL3A-203ENST00000539041 GDF5OSQ5U4N7 250 aa15.87■□□□□ 0.13
SMPDL3A-203ENST00000539041 IGFL4Q6B9Z1 124 aa15.87■□□□□ 0.13
SMPDL3A-203ENST00000539041 PGLYRP4Q96LB8 373 aa15.87■□□□□ 0.13
SMPDL3A-203ENST00000539041 NDUFA4O00483 81 aa15.86■□□□□ 0.13
SMPDL3A-203ENST00000539041 ESDP10768 282 aa15.86■□□□□ 0.13
SMPDL3A-203ENST00000539041 CFHR3Q02985 330 aa15.86■□□□□ 0.13
SMPDL3A-203ENST00000539041 OR10J3Q5JRS4 329 aa15.86■□□□□ 0.13
SMPDL3A-203ENST00000539041 BAGE3Q86Y29 109 aa15.86■□□□□ 0.13
SMPDL3A-203ENST00000539041 OR5R1Q8NH85 324 aa15.86■□□□□ 0.13
SMPDL3A-203ENST00000539041 LRRK2Q5S007 2527 aa15.85■□□□□ 0.13
SMPDL3A-203ENST00000539041 IGHV3OR16-13A0A075B7E8 117 aa15.85■□□□□ 0.13
SMPDL3A-203ENST00000539041 IGHV3-74A0A0B4J1X5 117 aa15.85■□□□□ 0.13
SMPDL3A-203ENST00000539041 TRBV12-3P01733 135 aa15.85■□□□□ 0.13
SMPDL3A-203ENST00000539041 SRIP30626 198 aa15.85■□□□□ 0.13
SMPDL3A-203ENST00000539041 CRIP1P50238 77 aa15.85■□□□□ 0.13
SMPDL3A-203ENST00000539041 HBBP68871 147 aa15.85■□□□□ 0.13
SMPDL3A-203ENST00000539041 SLAQ13239 276 aa15.85■□□□□ 0.13
SMPDL3A-203ENST00000539041 SAPCD1Q5SSQ6 148 aa15.85■□□□□ 0.13
SMPDL3A-203ENST00000539041 LCN12Q6JVE5 192 aa15.85■□□□□ 0.13
SMPDL3A-203ENST00000539041 KLK15Q9H2R5 256 aa15.85■□□□□ 0.13
SMPDL3A-203ENST00000539041 IGHV3-49A0A0A0MS15 119 aa15.85■□□□□ 0.13
SMPDL3A-203ENST00000539041 A0A0G2JLM5 398 aa15.85■□□□□ 0.13
SMPDL3A-203ENST00000539041 SERF1AO75920 110 aa15.85■□□□□ 0.13
SMPDL3A-203ENST00000539041 CAMPP49913 170 aa15.85■□□□□ 0.13
SMPDL3A-203ENST00000539041 LINC00310P59036 64 aa15.85■□□□□ 0.13
SMPDL3A-203ENST00000539041 JOSD1Q15040 202 aaPredicted RBP15.85■□□□□ 0.13
SMPDL3A-203ENST00000539041 CDPF1Q6NVV7 123 aa15.85■□□□□ 0.13
SMPDL3A-203ENST00000539041 COX8CQ7Z4L0 72 aa15.85■□□□□ 0.13
SMPDL3A-203ENST00000539041 GSN-AS1Q9NRJ2 163 aa15.85■□□□□ 0.13
SMPDL3A-203ENST00000539041 FBN2P35556 2912 aa15.84■□□□□ 0.13
SMPDL3A-203ENST00000539041 CSPG4Q6UVK1 2322 aa15.84■□□□□ 0.13
SMPDL3A-203ENST00000539041 ZNF705FA8MVS1 300 aaPredicted RBP15.84■□□□□ 0.13
SMPDL3A-203ENST00000539041 IGHV3-11P01762 117 aa15.84■□□□□ 0.13
SMPDL3A-203ENST00000539041 GZMBP10144 247 aa15.84■□□□□ 0.13
SMPDL3A-203ENST00000539041 C9orf139Q6ZV77 190 aa15.84■□□□□ 0.13
SMPDL3A-203ENST00000539041 PRR25Q96S07 402 aa15.84■□□□□ 0.13
SMPDL3A-203ENST00000539041 F2Z2F3 143 aa15.83■□□□□ 0.12
SMPDL3A-203ENST00000539041 FOXA3P55318 350 aaPredicted RBP15.83■□□□□ 0.12
SMPDL3A-203ENST00000539041 OR4X2Q8NGF9 303 aa15.83■□□□□ 0.12
SMPDL3A-203ENST00000539041 Q96MF0 132 aa15.83■□□□□ 0.12
SMPDL3A-203ENST00000539041 VGLL1Q99990 258 aa15.83■□□□□ 0.12
SMPDL3A-203ENST00000539041 PAFAH1B2P68402 229 aa15.82■□□□□ 0.12
SMPDL3A-203ENST00000539041 GLMPQ8WWB7 406 aa15.82■□□□□ 0.12
SMPDL3A-203ENST00000539041 EPG5Q9HCE0 2579 aa15.82■□□□□ 0.12
SMPDL3A-203ENST00000539041 PRSS57Q6UWY2 283 aa15.82■□□□□ 0.12
SMPDL3A-203ENST00000539041 MRPL53Q96EL3 112 aaKnown RBP15.82■□□□□ 0.12
SMPDL3A-203ENST00000539041 SVEP1Q4LDE5 3571 aa15.81■□□□□ 0.12
SMPDL3A-203ENST00000539041 RBAKDNA6NC62 111 aa15.81■□□□□ 0.12
SMPDL3A-203ENST00000539041 TMEM95Q3KNT9 176 aa15.81■□□□□ 0.12
SMPDL3A-203ENST00000539041 UNQ9165/PRO28630Q6UXU0 137 aa15.81■□□□□ 0.12
SMPDL3A-203ENST00000539041 RNF182Q8N6D2 247 aa15.81■□□□□ 0.12
SMPDL3A-203ENST00000539041 SSBP4Q9BWG4 385 aaPredicted RBP15.81■□□□□ 0.12
SMPDL3A-203ENST00000539041 SH2D1AO60880 128 aa15.8■□□□□ 0.12
SMPDL3A-203ENST00000539041 FAM209BQ5JX69 171 aa15.8■□□□□ 0.12
SMPDL3A-203ENST00000539041 FAM162BQ5T6X4 162 aa15.8■□□□□ 0.12
SMPDL3A-203ENST00000539041 Q6YL49 198 aa15.8■□□□□ 0.12
SMPDL3A-203ENST00000539041 LCNL1Q6ZST4 164 aa15.8■□□□□ 0.12
SMPDL3A-203ENST00000539041 C8orf86Q6ZUL3 223 aa15.8■□□□□ 0.12
SMPDL3A-203ENST00000539041 KRTAP1-3Q8IUG1 177 aa15.8■□□□□ 0.12
SMPDL3A-203ENST00000539041 Q8TAT8 98 aa15.8■□□□□ 0.12
SMPDL3A-203ENST00000539041 NDFIP1Q9BT67 221 aa15.8■□□□□ 0.12
SMPDL3A-203ENST00000539041 VPREB3Q9UKI3 123 aa15.8■□□□□ 0.12
SMPDL3A-203ENST00000539041 CELSR2Q9HCU4 2923 aa15.8■□□□□ 0.12
SMPDL3A-203ENST00000539041 CELSR1Q9NYQ6 3014 aa15.8■□□□□ 0.12
SMPDL3A-203ENST00000539041 TRAV8-2A0A0B4J237 113 aa15.8■□□□□ 0.12
SMPDL3A-203ENST00000539041 A8MWP6 167 aa15.8■□□□□ 0.12
SMPDL3A-203ENST00000539041 PRAC2D3DTV9 90 aa15.8■□□□□ 0.12
SMPDL3A-203ENST00000539041 HAX1O00165 279 aa15.8■□□□□ 0.12
SMPDL3A-203ENST00000539041 ZFHX3Q15911 3703 aa15.79■□□□□ 0.12
SMPDL3A-203ENST00000539041 Q6AWC8 147 aa15.79■□□□□ 0.12
SMPDL3A-203ENST00000539041 CYB5R2Q6BCY4 276 aa15.79■□□□□ 0.12
SMPDL3A-203ENST00000539041 NPFFR1Q9GZQ6 430 aa15.79■□□□□ 0.12
SMPDL3A-203ENST00000539041 TMEM89A2RUT3 159 aa15.78■□□□□ 0.12
SMPDL3A-203ENST00000539041 TMEM189A5PLL7 270 aa15.78■□□□□ 0.12
SMPDL3A-203ENST00000539041 C18orf32Q8TCD1 76 aa15.78■□□□□ 0.12
SMPDL3A-203ENST00000539041 CLEC5AQ9NY25 188 aa15.78■□□□□ 0.12
SMPDL3A-203ENST00000539041 SMAD7O15105 426 aaKnown RBP15.77■□□□□ 0.12
SMPDL3A-203ENST00000539041 BMI1P35226 326 aa15.77■□□□□ 0.12
SMPDL3A-203ENST00000539041 ERCC8Q13216 396 aa15.77■□□□□ 0.12
SMPDL3A-203ENST00000539041 KLF5Q13887 457 aaPredicted RBP15.77■□□□□ 0.12
SMPDL3A-203ENST00000539041 A0A1B0GUT8 65 aa15.77■□□□□ 0.11
SMPDL3A-203ENST00000539041 A0A1W2PS18 150 aa15.77■□□□□ 0.11
SMPDL3A-203ENST00000539041 PSMB8P28062 276 aa15.77■□□□□ 0.11
SMPDL3A-203ENST00000539041 RIGQ13278 110 aa15.77■□□□□ 0.11
SMPDL3A-203ENST00000539041 KCNS1Q96KK3 526 aa15.77■□□□□ 0.11
SMPDL3A-203ENST00000539041 RCHY1Q96PM5 261 aa15.77■□□□□ 0.11
SMPDL3A-203ENST00000539041 ALKBH7Q9BT30 221 aaPredicted RBP15.77■□□□□ 0.11
SMPDL3A-203ENST00000539041 C16orf92Q96LL3 132 aa15.76■□□□□ 0.11
SMPDL3A-203ENST00000539041 SAMD10Q9BYL1 202 aa15.76■□□□□ 0.11
SMPDL3A-203ENST00000539041 PRDM13Q9H4Q3 707 aa15.76■□□□□ 0.11
SMPDL3A-203ENST00000539041 PEF1Q9UBV8 284 aaKnown RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms