RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 ZNF688P0C7X2 276 aa10.63□□□□□ -0.71
CD4-208ENST00000538827 ID1P41134 155 aa10.63□□□□□ -0.71
CD4-208ENST00000538827 CSN1S1P47710 185 aa10.63□□□□□ -0.71
CD4-208ENST00000538827 ZNF674Q2M3X9 581 aa10.63□□□□□ -0.71
CD4-208ENST00000538827 C9orf66Q5T8R8 295 aa10.63□□□□□ -0.71
CD4-208ENST00000538827 SAMD13Q5VXD3 122 aa10.63□□□□□ -0.71
CD4-208ENST00000538827 CYB561D1Q8N8Q1 229 aa10.63□□□□□ -0.71
CD4-208ENST00000538827 C5orf17Q8NAS9 161 aa10.63□□□□□ -0.71
CD4-208ENST00000538827 ZNF738Q8NE65 137 aa10.63□□□□□ -0.71
CD4-208ENST00000538827 RPUSD4Q96CM3 377 aaKnown RBP10.63□□□□□ -0.71
CD4-208ENST00000538827 NKX6-2Q9C056 277 aaPredicted RBP10.63□□□□□ -0.71
CD4-208ENST00000538827 C9JQL5 133 aa10.62□□□□□ -0.71
CD4-208ENST00000538827 PEX7O00628 323 aa10.62□□□□□ -0.71
CD4-208ENST00000538827 ISLRO14498 428 aa10.62□□□□□ -0.71
CD4-208ENST00000538827 TSPAN4O14817 238 aa10.62□□□□□ -0.71
CD4-208ENST00000538827 SFTA3P0C7M3 94 aa10.62□□□□□ -0.71
CD4-208ENST00000538827 LCN12Q6JVE5 192 aa10.62□□□□□ -0.71
CD4-208ENST00000538827 EIF4E3Q8N5X7 224 aaKnown RBP10.62□□□□□ -0.71
CD4-208ENST00000538827 DCANP1Q8TF63 244 aa10.62□□□□□ -0.71
CD4-208ENST00000538827 C20orf173Q96LM9 149 aa10.62□□□□□ -0.71
CD4-208ENST00000538827 PRELID1Q9Y255 219 aa10.62□□□□□ -0.71
CD4-208ENST00000538827 TRAV25A0A0B4J276 109 aa10.61□□□□□ -0.71
CD4-208ENST00000538827 OR4C46A6NHA9 309 aa10.61□□□□□ -0.71
CD4-208ENST00000538827 K7EQG2 157 aa10.61□□□□□ -0.71
CD4-208ENST00000538827 IGLV1-51P01701 117 aa10.61□□□□□ -0.71
CD4-208ENST00000538827 PSMG4Q5JS54 123 aa10.61□□□□□ -0.71
CD4-208ENST00000538827 GOLT1AQ6ZVE7 132 aa10.61□□□□□ -0.71
CD4-208ENST00000538827 CCDC28AQ8IWP9 274 aa10.61□□□□□ -0.71
CD4-208ENST00000538827 FAM24BQ8N5W8 94 aa10.61□□□□□ -0.71
CD4-208ENST00000538827 SPAG8Q99932 426 aaPredicted RBP10.61□□□□□ -0.71
CD4-208ENST00000538827 MCRIP2Q9BUT9 160 aaKnown RBP10.61□□□□□ -0.71
CD4-208ENST00000538827 SLC35B3Q9H1N7 401 aa10.61□□□□□ -0.71
CD4-208ENST00000538827 IGKV2-40A0A087WW87 121 aaPredicted RBP10.6□□□□□ -0.71
CD4-208ENST00000538827 ZNF705FA8MVS1 300 aaPredicted RBP10.6□□□□□ -0.71
CD4-208ENST00000538827 IGKV2D-40P01614 121 aaPredicted RBP10.6□□□□□ -0.71
CD4-208ENST00000538827 IGLL1P15814 213 aa10.6□□□□□ -0.71
CD4-208ENST00000538827 CNN1P51911 297 aaKnown RBP10.6□□□□□ -0.71
CD4-208ENST00000538827 SNRPD3P62318 126 aaKnown RBP10.6□□□□□ -0.71
CD4-208ENST00000538827 PSG3Q16557 428 aa10.6□□□□□ -0.71
CD4-208ENST00000538827 OR2K2Q8NGT1 345 aa10.6□□□□□ -0.71
CD4-208ENST00000538827 C11orf52Q96A22 123 aa10.6□□□□□ -0.71
CD4-208ENST00000538827 TCEAL7Q9BRU2 100 aa10.6□□□□□ -0.71
CD4-208ENST00000538827 ATG101Q9BSB4 218 aa10.6□□□□□ -0.71
CD4-208ENST00000538827 SMDT1Q9H4I9 107 aa10.6□□□□□ -0.71
CD4-208ENST00000538827 EPDR1Q9UM22 224 aa10.6□□□□□ -0.71
CD4-208ENST00000538827 TRAV2A0A0B4J234 112 aa10.59□□□□□ -0.71
CD4-208ENST00000538827 TMEM250H0YL14 139 aa10.59□□□□□ -0.71
CD4-208ENST00000538827 K7EQM0 130 aa10.59□□□□□ -0.71
CD4-208ENST00000538827 TCRAP04437 139 aa10.59□□□□□ -0.71
CD4-208ENST00000538827 UBE2G1P62253 170 aa10.59□□□□□ -0.71
CD4-208ENST00000538827 HIST1H2BAQ96A08 127 aa10.59□□□□□ -0.71
CD4-208ENST00000538827 MRPL53Q96EL3 112 aaKnown RBP10.59□□□□□ -0.71
CD4-208ENST00000538827 SGK494Q96LW2 274 aa10.59□□□□□ -0.71
CD4-208ENST00000538827 PARLQ9H300 379 aa10.59□□□□□ -0.71
CD4-208ENST00000538827 CLEC5AQ9NY25 188 aa10.59□□□□□ -0.71
CD4-208ENST00000538827 TRAV34A0A0B4J273 112 aa10.58□□□□□ -0.72
CD4-208ENST00000538827 TMEM218A2RU14 115 aa10.58□□□□□ -0.72
CD4-208ENST00000538827 DIRC3C9JPN6 131 aa10.58□□□□□ -0.72
CD4-208ENST00000538827 F8W036 122 aa10.58□□□□□ -0.72
CD4-208ENST00000538827 ATP6V1G1O75348 118 aa10.58□□□□□ -0.72
CD4-208ENST00000538827 INSL3P51460 131 aa10.58□□□□□ -0.72
CD4-208ENST00000538827 DEFB1P60022 68 aa10.58□□□□□ -0.72
CD4-208ENST00000538827 SMIM7Q9BQ49 75 aa10.58□□□□□ -0.72
CD4-208ENST00000538827 DERL1Q9BUN8 251 aa10.58□□□□□ -0.72
CD4-208ENST00000538827 ZNF727A8MUV8 499 aa10.57□□□□□ -0.72
CD4-208ENST00000538827 PRAC2D3DTV9 90 aa10.57□□□□□ -0.72
CD4-208ENST00000538827 DEFB131AP59861 70 aa10.57□□□□□ -0.72
CD4-208ENST00000538827 HIST1H1AQ02539 215 aaPredicted RBP10.57□□□□□ -0.72
CD4-208ENST00000538827 SOHLH1Q5JUK2 328 aa10.57□□□□□ -0.72
CD4-208ENST00000538827 C2CD4CQ8TF44 421 aa10.57□□□□□ -0.72
CD4-208ENST00000538827 MAP6D1Q9H9H5 199 aa10.57□□□□□ -0.72
CD4-208ENST00000538827 RYR3Q15413 4870 aa10.57□□□□□ -0.72
CD4-208ENST00000538827 TRAV8-1A0A0A6YYK1 113 aa10.56□□□□□ -0.72
CD4-208ENST00000538827 SERTM2A0A1B0GWG4 89 aa10.56□□□□□ -0.72
CD4-208ENST00000538827 F6UB75 175 aa10.56□□□□□ -0.72
CD4-208ENST00000538827 NDUFS6O75380 124 aaKnown RBP10.56□□□□□ -0.72
CD4-208ENST00000538827 ZNF705DP0CH99 300 aaPredicted RBP10.56□□□□□ -0.72
CD4-208ENST00000538827 ZNF705BP0CI00 300 aaPredicted RBP10.56□□□□□ -0.72
CD4-208ENST00000538827 ADCYAP1P18509 176 aa10.56□□□□□ -0.72
CD4-208ENST00000538827 RPL35P42766 123 aaKnown RBP10.56□□□□□ -0.72
CD4-208ENST00000538827 ERCC8Q13216 396 aa10.56□□□□□ -0.72
CD4-208ENST00000538827 PRNTQ86SH4 94 aa10.56□□□□□ -0.72
CD4-208ENST00000538827 Q86TA4 180 aa10.56□□□□□ -0.72
CD4-208ENST00000538827 OR10J6PQ8NGY7 276 aa10.56□□□□□ -0.72
CD4-208ENST00000538827 FMC1Q96HJ9 113 aa10.56□□□□□ -0.72
CD4-208ENST00000538827 LINC00479Q96M42 142 aa10.56□□□□□ -0.72
CD4-208ENST00000538827 GPR61Q9BZJ8 451 aa10.56□□□□□ -0.72
CD4-208ENST00000538827 CENPWQ5EE01 88 aa10.55□□□□□ -0.72
CD4-208ENST00000538827 TMEM75Q8N9X5 138 aa10.55□□□□□ -0.72
CD4-208ENST00000538827 WFDC9Q8NEX5 89 aa10.55□□□□□ -0.72
CD4-208ENST00000538827 Q8TAT8 98 aa10.55□□□□□ -0.72
CD4-208ENST00000538827 ASCL2Q99929 193 aa10.55□□□□□ -0.72
CD4-208ENST00000538827 ZNF256Q9Y2P7 627 aaPredicted RBP10.55□□□□□ -0.72
CD4-208ENST00000538827 KNCNA6PVL3 124 aa10.54□□□□□ -0.72
CD4-208ENST00000538827 OR11H12B2RN74 326 aa10.54□□□□□ -0.72
CD4-208ENST00000538827 GNG4P50150 75 aa10.54□□□□□ -0.72
CD4-208ENST00000538827 FLI1Q01543 452 aaPredicted RBP10.54□□□□□ -0.72
CD4-208ENST00000538827 TMEM183BQ1AE95 376 aa10.54□□□□□ -0.72
CD4-208ENST00000538827 TMEM78Q5T7P6 136 aa10.54□□□□□ -0.72
CD4-208ENST00000538827 EBLN2Q6P2I7 272 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms