RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 HIST2H2BCQ6DN03 193 aa11.39□□□□□ -0.59
ATL3-203ENST00000538786 MRPL54Q6P161 138 aaKnown RBP11.39□□□□□ -0.59
ATL3-203ENST00000538786 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.39□□□□□ -0.59
ATL3-203ENST00000538786 TMEM136Q6ZRR5 245 aa11.39□□□□□ -0.59
ATL3-203ENST00000538786 OR4B1Q8NGF8 309 aa11.39□□□□□ -0.59
ATL3-203ENST00000538786 OR4X2Q8NGF9 303 aa11.39□□□□□ -0.59
ATL3-203ENST00000538786 ZC2HC1AQ96GY0 325 aa11.39□□□□□ -0.59
ATL3-203ENST00000538786 SLC50A1Q9BRV3 221 aa11.39□□□□□ -0.59
ATL3-203ENST00000538786 IGHV3OR16-13A0A075B7E8 117 aa11.38□□□□□ -0.59
ATL3-203ENST00000538786 IGHV3-74A0A0B4J1X5 117 aa11.38□□□□□ -0.59
ATL3-203ENST00000538786 HIGD1CA8MV81 97 aa11.38□□□□□ -0.59
ATL3-203ENST00000538786 TMEM95Q3KNT9 176 aa11.38□□□□□ -0.59
ATL3-203ENST00000538786 Q71RC1 249 aaPredicted RBP11.38□□□□□ -0.59
ATL3-203ENST00000538786 WIPF2Q8TF74 440 aaPredicted RBP11.38□□□□□ -0.59
ATL3-203ENST00000538786 GFRA4Q9GZZ7 299 aa11.38□□□□□ -0.59
ATL3-203ENST00000538786 CR1P17927 2039 aa11.38□□□□□ -0.59
ATL3-203ENST00000538786 TMEM89A2RUT3 159 aa11.37□□□□□ -0.59
ATL3-203ENST00000538786 FAM231BA6NCW3 169 aa11.37□□□□□ -0.59
ATL3-203ENST00000538786 FAM209BQ5JX69 171 aa11.37□□□□□ -0.59
ATL3-203ENST00000538786 LCN12Q6JVE5 192 aa11.37□□□□□ -0.59
ATL3-203ENST00000538786 C16orf54Q6UWD8 224 aa11.37□□□□□ -0.59
ATL3-203ENST00000538786 ABCA12Q86UK0 2595 aa11.37□□□□□ -0.59
ATL3-203ENST00000538786 IGKV2-40A0A087WW87 121 aaPredicted RBP11.37□□□□□ -0.59
ATL3-203ENST00000538786 IGHV3-49A0A0A0MS15 119 aa11.37□□□□□ -0.59
ATL3-203ENST00000538786 IGKV2D-40P01614 121 aaPredicted RBP11.37□□□□□ -0.59
ATL3-203ENST00000538786 HLA-DQA1P01909 254 aa11.37□□□□□ -0.59
ATL3-203ENST00000538786 PRB4P10163 310 aaPredicted RBP11.37□□□□□ -0.59
ATL3-203ENST00000538786 PSMB8P28062 276 aa11.37□□□□□ -0.59
ATL3-203ENST00000538786 SAPCD1Q5SSQ6 148 aa11.37□□□□□ -0.59
ATL3-203ENST00000538786 IGFL4Q6B9Z1 124 aa11.37□□□□□ -0.59
ATL3-203ENST00000538786 UNQ9165/PRO28630Q6UXU0 137 aa11.37□□□□□ -0.59
ATL3-203ENST00000538786 LCNL1Q6ZST4 164 aa11.37□□□□□ -0.59
ATL3-203ENST00000538786 WFDC11Q8NEX6 87 aa11.37□□□□□ -0.59
ATL3-203ENST00000538786 FASNP49327 2511 aaKnown RBP11.36□□□□□ -0.59
ATL3-203ENST00000538786 MAP1AP78559 2803 aaPredicted RBP11.36□□□□□ -0.59
ATL3-203ENST00000538786 HOXA3O43365 443 aaPredicted RBP11.36□□□□□ -0.59
ATL3-203ENST00000538786 HLA-DMBP28068 263 aa11.36□□□□□ -0.59
ATL3-203ENST00000538786 RAB4BP61018 213 aa11.36□□□□□ -0.59
ATL3-203ENST00000538786 COX8CQ7Z4L0 72 aa11.36□□□□□ -0.59
ATL3-203ENST00000538786 ATP5L2Q7Z4Y8 100 aa11.36□□□□□ -0.59
ATL3-203ENST00000538786 GLMPQ8WWB7 406 aa11.36□□□□□ -0.59
ATL3-203ENST00000538786 CELSR1Q9NYQ6 3014 aa11.36□□□□□ -0.59
ATL3-203ENST00000538786 CT45A10P0DMU9 189 aa11.35□□□□□ -0.59
ATL3-203ENST00000538786 FABP4P15090 132 aa11.35□□□□□ -0.59
ATL3-203ENST00000538786 OR2D3Q8NGH3 330 aa11.35□□□□□ -0.59
ATL3-203ENST00000538786 GTSF1Q8WW33 167 aa11.35□□□□□ -0.59
ATL3-203ENST00000538786 HIST1H2BLQ99880 126 aa11.35□□□□□ -0.59
ATL3-203ENST00000538786 ASCL2Q99929 193 aa11.35□□□□□ -0.59
ATL3-203ENST00000538786 PRRC2AP48634 2157 aaKnown RBP11.35□□□□□ -0.59
ATL3-203ENST00000538786 ZNF705FA8MVS1 300 aaPredicted RBP11.35□□□□□ -0.59
ATL3-203ENST00000538786 TCF24Q7RTU0 167 aa11.35□□□□□ -0.59
ATL3-203ENST00000538786 C8orf49Q96NF6 230 aa11.35□□□□□ -0.59
ATL3-203ENST00000538786 NPFFR1Q9GZQ6 430 aa11.35□□□□□ -0.59
ATL3-203ENST00000538786 RBAKDNA6NC62 111 aa11.34□□□□□ -0.59
ATL3-203ENST00000538786 CRIP1P50238 77 aa11.34□□□□□ -0.59
ATL3-203ENST00000538786 RBPMS2Q6ZRY4 209 aaKnown RBP11.34□□□□□ -0.59
ATL3-203ENST00000538786 C8orf86Q6ZUL3 223 aa11.34□□□□□ -0.59
ATL3-203ENST00000538786 TEX29Q8N6K0 151 aa11.34□□□□□ -0.59
ATL3-203ENST00000538786 OR10D4PQ8NGN7 298 aa11.34□□□□□ -0.59
ATL3-203ENST00000538786 MRPL53Q96EL3 112 aaKnown RBP11.34□□□□□ -0.59
ATL3-203ENST00000538786 PRR25Q96S07 402 aa11.34□□□□□ -0.59
ATL3-203ENST00000538786 VGLL1Q99990 258 aa11.34□□□□□ -0.59
ATL3-203ENST00000538786 PEF1Q9UBV8 284 aaKnown RBP11.34□□□□□ -0.59
ATL3-203ENST00000538786 TRAV8-2A0A0B4J237 113 aa11.33□□□□□ -0.6
ATL3-203ENST00000538786 A0A1B0GXF2 115 aa11.33□□□□□ -0.6
ATL3-203ENST00000538786 CRISP2P16562 243 aa11.33□□□□□ -0.6
ATL3-203ENST00000538786 RNF182Q8N6D2 247 aa11.33□□□□□ -0.6
ATL3-203ENST00000538786 ZNF702PQ9H963 129 aa11.33□□□□□ -0.6
ATL3-203ENST00000538786 CLEC5AQ9NY25 188 aa11.33□□□□□ -0.6
ATL3-203ENST00000538786 A0A1W2PS18 150 aa11.33□□□□□ -0.6
ATL3-203ENST00000538786 GRIFINA4D1Z8 144 aa11.33□□□□□ -0.6
ATL3-203ENST00000538786 SMAD7O15105 426 aaKnown RBP11.33□□□□□ -0.6
ATL3-203ENST00000538786 APCSP02743 223 aa11.33□□□□□ -0.6
ATL3-203ENST00000538786 AMBPP02760 352 aa11.33□□□□□ -0.6
ATL3-203ENST00000538786 PACRGQ96M98 296 aaPredicted RBP11.33□□□□□ -0.6
ATL3-203ENST00000538786 CSPG4Q6UVK1 2322 aa11.32□□□□□ -0.6
ATL3-203ENST00000538786 APCP25054 2843 aa11.32□□□□□ -0.6
ATL3-203ENST00000538786 FOXA3P55318 350 aaPredicted RBP11.32□□□□□ -0.6
ATL3-203ENST00000538786 PGLYRP4Q96LB8 373 aa11.32□□□□□ -0.6
ATL3-203ENST00000538786 PRAC2D3DTV9 90 aa11.31□□□□□ -0.6
ATL3-203ENST00000538786 HBBP68871 147 aa11.31□□□□□ -0.6
ATL3-203ENST00000538786 Q0VG73 95 aa11.31□□□□□ -0.6
ATL3-203ENST00000538786 FOXE3Q13461 319 aa11.31□□□□□ -0.6
ATL3-203ENST00000538786 FAM162BQ5T6X4 162 aa11.31□□□□□ -0.6
ATL3-203ENST00000538786 GDF5OSQ5U4N7 250 aa11.31□□□□□ -0.6
ATL3-203ENST00000538786 C10orf99Q6UWK7 81 aa11.31□□□□□ -0.6
ATL3-203ENST00000538786 Q8TAT8 98 aa11.31□□□□□ -0.6
ATL3-203ENST00000538786 NDFIP1Q9BT67 221 aa11.31□□□□□ -0.6
ATL3-203ENST00000538786 DAZ1Q9NQZ3 744 aaKnown RBP11.31□□□□□ -0.6
ATL3-203ENST00000538786 NBPF19A0A087WUL8 3843 aa11.31□□□□□ -0.6
ATL3-203ENST00000538786 IGHV7-4-1A0A0J9YVY3 117 aa11.31□□□□□ -0.6
ATL3-203ENST00000538786 K7EMT4 169 aa11.31□□□□□ -0.6
ATL3-203ENST00000538786 ELANEP08246 267 aa11.31□□□□□ -0.6
ATL3-203ENST00000538786 GZMBP10144 247 aa11.31□□□□□ -0.6
ATL3-203ENST00000538786 FAM106AQ4KMX7 169 aa11.31□□□□□ -0.6
ATL3-203ENST00000538786 TMEM256Q8N2U0 113 aa11.31□□□□□ -0.6
ATL3-203ENST00000538786 SIGLECL1Q8N7X8 197 aa11.31□□□□□ -0.6
ATL3-203ENST00000538786 A0A1B0GUS0 222 aa11.3□□□□□ -0.6
ATL3-203ENST00000538786 SH2D1AO60880 128 aa11.3□□□□□ -0.6
ATL3-203ENST00000538786 CAMPP49913 170 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms