RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 FXYD2P54710 66 aa7.14□□□□□ -1.27
SNHG1-209ENST00000538654 ZNF788Q6ZQV5 615 aa7.14□□□□□ -1.27
SNHG1-209ENST00000538654 CEND1Q8N111 149 aa7.14□□□□□ -1.27
SNHG1-209ENST00000538654 ZNF502Q8TBZ5 544 aa7.14□□□□□ -1.27
SNHG1-209ENST00000538654 PHLDA1Q8WV24 401 aaPredicted RBP7.14□□□□□ -1.27
SNHG1-209ENST00000538654 GAFA1Q96PS6 74 aa7.14□□□□□ -1.27
SNHG1-209ENST00000538654 SLC25A39Q9BZJ4 359 aaPredicted RBP7.14□□□□□ -1.27
SNHG1-209ENST00000538654 PSG8Q9UQ74 426 aa7.14□□□□□ -1.27
SNHG1-209ENST00000538654 MBD3L5A6NJ08 208 aaPredicted RBP7.14□□□□□ -1.27
SNHG1-209ENST00000538654 H3BTX0 84 aa7.14□□□□□ -1.27
SNHG1-209ENST00000538654 HES3Q5TGS1 186 aa7.14□□□□□ -1.27
SNHG1-209ENST00000538654 TMEM178AQ8NBL3 297 aa7.14□□□□□ -1.27
SNHG1-209ENST00000538654 MRAP2Q96G30 205 aa7.14□□□□□ -1.27
SNHG1-209ENST00000538654 DSCAMO60469 2012 aa7.14□□□□□ -1.27
SNHG1-209ENST00000538654 A0A1W2PPI3 338 aa7.14□□□□□ -1.27
SNHG1-209ENST00000538654 VCYO14598 125 aa7.14□□□□□ -1.27
SNHG1-209ENST00000538654 VPREB1P12018 145 aa7.14□□□□□ -1.27
SNHG1-209ENST00000538654 C10orf55Q5SWW7 151 aa7.14□□□□□ -1.27
SNHG1-209ENST00000538654 EXOC3-AS1Q8N2X6 119 aa7.14□□□□□ -1.27
SNHG1-209ENST00000538654 SPRY4Q9C004 299 aa7.14□□□□□ -1.27
SNHG1-209ENST00000538654 V9GYY9 64 aa7.14□□□□□ -1.27
SNHG1-209ENST00000538654 FAM186AA6NE01 2351 aa7.13□□□□□ -1.27
SNHG1-209ENST00000538654 F5H768 121 aa7.13□□□□□ -1.27
SNHG1-209ENST00000538654 SPRY3O43610 288 aa7.13□□□□□ -1.27
SNHG1-209ENST00000538654 EVI2AP22794 236 aa7.13□□□□□ -1.27
SNHG1-209ENST00000538654 CKS2P33552 79 aa7.13□□□□□ -1.27
SNHG1-209ENST00000538654 TCTAP57738 103 aa7.13□□□□□ -1.27
SNHG1-209ENST00000538654 MRPL51Q4U2R6 128 aaKnown RBP7.13□□□□□ -1.27
SNHG1-209ENST00000538654 NHP2Q9NX24 153 aaKnown RBP7.13□□□□□ -1.27
SNHG1-209ENST00000538654 SS18L2Q9UHA2 77 aa7.13□□□□□ -1.27
SNHG1-209ENST00000538654 IGLL5B9A064 214 aa7.13□□□□□ -1.27
SNHG1-209ENST00000538654 USP17L23D6RBM5 183 aa7.13□□□□□ -1.27
SNHG1-209ENST00000538654 IGLV2-23P01705 113 aa7.13□□□□□ -1.27
SNHG1-209ENST00000538654 LYZP61626 148 aa7.13□□□□□ -1.27
SNHG1-209ENST00000538654 SRSF6Q13247 344 aaKnown RBP7.13□□□□□ -1.27
SNHG1-209ENST00000538654 WFDC2Q14508 124 aa7.13□□□□□ -1.27
SNHG1-209ENST00000538654 LYZL1Q6UWQ5 148 aa7.13□□□□□ -1.27
SNHG1-209ENST00000538654 AMN1Q8IY45 258 aa7.13□□□□□ -1.27
SNHG1-209ENST00000538654 PTH2Q96A98 100 aa7.13□□□□□ -1.27
SNHG1-209ENST00000538654 DKK2Q9UBU2 259 aa7.13□□□□□ -1.27
SNHG1-209ENST00000538654 HEATR1Q9H583 2144 aaKnown RBP7.12□□□□□ -1.27
SNHG1-209ENST00000538654 TRBV19A0A075B6N1 114 aa7.12□□□□□ -1.27
SNHG1-209ENST00000538654 LINC01546A6NGU7 62 aa7.12□□□□□ -1.27
SNHG1-209ENST00000538654 ATP5LO75964 103 aa7.12□□□□□ -1.27
SNHG1-209ENST00000538654 IGKCP01834 107 aa7.12□□□□□ -1.27
SNHG1-209ENST00000538654 GAGE13Q4V321 117 aa7.12□□□□□ -1.27
SNHG1-209ENST00000538654 C8orf31Q8N9H6 132 aa7.12□□□□□ -1.27
SNHG1-209ENST00000538654 RITA1Q96K30 269 aa7.12□□□□□ -1.27
SNHG1-209ENST00000538654 CCL13Q99616 98 aa7.12□□□□□ -1.27
SNHG1-209ENST00000538654 MAP1LC3AQ9H492 121 aa7.12□□□□□ -1.27
SNHG1-209ENST00000538654 ZNF71Q9NQZ8 489 aaPredicted RBP7.12□□□□□ -1.27
SNHG1-209ENST00000538654 ZNRD1Q9P1U0 126 aa7.12□□□□□ -1.27
SNHG1-209ENST00000538654 RAI1Q7Z5J4 1906 aaPredicted RBP7.12□□□□□ -1.27
SNHG1-209ENST00000538654 PRR14LQ5THK1 2151 aa7.12□□□□□ -1.27
SNHG1-209ENST00000538654 TRBV25-1A0A075B6N4 114 aa7.12□□□□□ -1.27
SNHG1-209ENST00000538654 WI2-2373I1.2A0A1W2PRP0 233 aa7.12□□□□□ -1.27
SNHG1-209ENST00000538654 K7EM74 188 aa7.12□□□□□ -1.27
SNHG1-209ENST00000538654 GLRXP35754 106 aa7.12□□□□□ -1.27
SNHG1-209ENST00000538654 PLGLAQ15195 96 aa7.12□□□□□ -1.27
SNHG1-209ENST00000538654 FAM201AQ5SY85 155 aa7.12□□□□□ -1.27
SNHG1-209ENST00000538654 DUX4L9Q6RFH8 374 aaPredicted RBP7.12□□□□□ -1.27
SNHG1-209ENST00000538654 MRPL16Q9NX20 251 aaKnown RBP7.12□□□□□ -1.27
SNHG1-209ENST00000538654 HHLA3Q9XRX5 114 aa7.12□□□□□ -1.27
SNHG1-209ENST00000538654 TRIOO75962 3097 aa7.11□□□□□ -1.27
SNHG1-209ENST00000538654 K7ERJ3 54 aa7.11□□□□□ -1.27
SNHG1-209ENST00000538654 FCER1GP30273 86 aa7.11□□□□□ -1.27
SNHG1-209ENST00000538654 TWIST1Q15672 202 aa7.11□□□□□ -1.27
SNHG1-209ENST00000538654 SPRNQ5BIV9 151 aa7.11□□□□□ -1.27
SNHG1-209ENST00000538654 KLF17Q5JT82 389 aaPredicted RBP7.11□□□□□ -1.27
SNHG1-209ENST00000538654 HCP5Q6MZN7 132 aa7.11□□□□□ -1.27
SNHG1-209ENST00000538654 FAM216BQ8N7L0 139 aa7.11□□□□□ -1.27
SNHG1-209ENST00000538654 NXT2Q9NPJ8 142 aaKnown RBP7.11□□□□□ -1.27
SNHG1-209ENST00000538654 RNF223E7ERA6 249 aa7.11□□□□□ -1.27
SNHG1-209ENST00000538654 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.11□□□□□ -1.27
SNHG1-209ENST00000538654 J3QLI3 93 aa7.11□□□□□ -1.27
SNHG1-209ENST00000538654 DPM2O94777 84 aa7.11□□□□□ -1.27
SNHG1-209ENST00000538654 RPL27AP46776 148 aaKnown RBP7.11□□□□□ -1.27
SNHG1-209ENST00000538654 CRIP1P50238 77 aa7.11□□□□□ -1.27
SNHG1-209ENST00000538654 TNFAIP6P98066 277 aaPredicted RBP7.11□□□□□ -1.27
SNHG1-209ENST00000538654 Q6ZS92 163 aa7.11□□□□□ -1.27
SNHG1-209ENST00000538654 TTC9CQ8N5M4 171 aa7.11□□□□□ -1.27
SNHG1-209ENST00000538654 LINC00311Q8N616 119 aa7.11□□□□□ -1.27
SNHG1-209ENST00000538654 DEFB108BQ8NET1 73 aa7.11□□□□□ -1.27
SNHG1-209ENST00000538654 KNTC1P50748 2209 aa7.1□□□□□ -1.27
SNHG1-209ENST00000538654 TMEM213A2RRL7 107 aa7.1□□□□□ -1.27
SNHG1-209ENST00000538654 NPYP01303 97 aa7.1□□□□□ -1.27
SNHG1-209ENST00000538654 IGHG3P01860 377 aa7.1□□□□□ -1.27
SNHG1-209ENST00000538654 PRSS1P07477 247 aa7.1□□□□□ -1.27
SNHG1-209ENST00000538654 MSMPQ1L6U9 139 aa7.1□□□□□ -1.27
SNHG1-209ENST00000538654 ETDBQ3ZM63 59 aa7.1□□□□□ -1.27
SNHG1-209ENST00000538654 TEX36Q5VZQ5 186 aa7.1□□□□□ -1.27
SNHG1-209ENST00000538654 RASL11BQ9BPW5 248 aa7.1□□□□□ -1.27
SNHG1-209ENST00000538654 SLC25A15Q9Y619 301 aa7.1□□□□□ -1.27
SNHG1-209ENST00000538654 X6R8D5 127 aa7.1□□□□□ -1.27
SNHG1-209ENST00000538654 COL27A1Q8IZC6 1860 aaPredicted RBP7.1□□□□□ -1.27
SNHG1-209ENST00000538654 IGLV3-9A0A075B6K5 115 aa7.1□□□□□ -1.27
SNHG1-209ENST00000538654 IGKV2D-26A0A0A0MRZ7 120 aa7.1□□□□□ -1.27
SNHG1-209ENST00000538654 C8orf86Q6ZUL3 223 aa7.1□□□□□ -1.27
SNHG1-209ENST00000538654 LINC01561Q8N1V8 128 aa7.1□□□□□ -1.27
SNHG1-209ENST00000538654 ATP6V0E2Q8NHE4 81 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms