RNA–Protein interactions for RNA: ENST00000537686.5

GGA3-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA3, Length 4,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-201ENST00000537686 PARD6GQ9BYG4 376 aaPredicted RBP8.1□□□□□ -1.11
GGA3-201ENST00000537686 SAP30O75446 220 aa8.1□□□□□ -1.11
GGA3-201ENST00000537686 TOMM40O96008 361 aa8.1□□□□□ -1.11
GGA3-201ENST00000537686 IFI27P40305 119 aaPredicted RBP8.1□□□□□ -1.11
GGA3-201ENST00000537686 DIAPH2-AS1Q14236 149 aa8.1□□□□□ -1.11
GGA3-201ENST00000537686 LCNL1Q6ZST4 164 aa8.1□□□□□ -1.11
GGA3-201ENST00000537686 TPSG1Q9NRR2 321 aa8.1□□□□□ -1.11
GGA3-201ENST00000537686 DKK4Q9UBT3 224 aa8.1□□□□□ -1.11
GGA3-201ENST00000537686 KLHL30-AS1Q8NEE0 82 aa8.09□□□□□ -1.11
GGA3-201ENST00000537686 Q8NFD4 153 aa8.09□□□□□ -1.11
GGA3-201ENST00000537686 SRSF8Q9BRL6 282 aaKnown RBP8.09□□□□□ -1.11
GGA3-201ENST00000537686 EML5Q05BV3 1969 aa8.09□□□□□ -1.11
GGA3-201ENST00000537686 TRAV12-3A0A0B4J271 114 aa8.09□□□□□ -1.11
GGA3-201ENST00000537686 IGKV3D-20A0A0C4DH25 116 aa8.09□□□□□ -1.11
GGA3-201ENST00000537686 NDUFS6O75380 124 aaKnown RBP8.09□□□□□ -1.11
GGA3-201ENST00000537686 SRSF1Q07955 248 aaKnown RBP eCLIP8.09□□□□□ -1.11
GGA3-201ENST00000537686 LYPD1Q8N2G4 141 aa8.09□□□□□ -1.11
GGA3-201ENST00000537686 NUP35Q8NFH5 326 aa8.09□□□□□ -1.11
GGA3-201ENST00000537686 SHANK2-AS3Q9BTD1 123 aa8.09□□□□□ -1.11
GGA3-201ENST00000537686 FN1P02751 2386 aaKnown RBP8.09□□□□□ -1.11
GGA3-201ENST00000537686 TRGV4A0A0C4DH28 118 aa8.09□□□□□ -1.11
GGA3-201ENST00000537686 D6R8Y8 96 aa8.09□□□□□ -1.11
GGA3-201ENST00000537686 SYNJ2BPP57105 145 aa8.09□□□□□ -1.11
GGA3-201ENST00000537686 IGFL2Q6UWQ7 119 aa8.09□□□□□ -1.11
GGA3-201ENST00000537686 ZNF833PQ6ZTB9 187 aa8.09□□□□□ -1.11
GGA3-201ENST00000537686 DEFB104AQ8WTQ1 72 aa8.09□□□□□ -1.11
GGA3-201ENST00000537686 LY96Q9Y6Y9 160 aa8.09□□□□□ -1.11
GGA3-201ENST00000537686 TRGV11A0A075B6L2 103 aa8.08□□□□□ -1.12
GGA3-201ENST00000537686 IGHV1-69DA0A0B4J2H0 117 aa8.08□□□□□ -1.12
GGA3-201ENST00000537686 IGHV1-69P01742 117 aa8.08□□□□□ -1.12
GGA3-201ENST00000537686 RNASE1P07998 156 aaKnown RBP8.08□□□□□ -1.12
GGA3-201ENST00000537686 CYB5R2Q6BCY4 276 aa8.08□□□□□ -1.12
GGA3-201ENST00000537686 TRAV9-2A0A087WT02 112 aa8.08□□□□□ -1.12
GGA3-201ENST00000537686 TMEM8BA6NDV4 472 aa8.08□□□□□ -1.12
GGA3-201ENST00000537686 SMIM13P0DJ93 91 aa8.08□□□□□ -1.12
GGA3-201ENST00000537686 PSG3Q16557 428 aa8.08□□□□□ -1.12
GGA3-201ENST00000537686 TMEM249Q2WGJ8 235 aa8.08□□□□□ -1.12
GGA3-201ENST00000537686 ORMDL2Q53FV1 153 aa8.08□□□□□ -1.12
GGA3-201ENST00000537686 LINC00311Q8N616 119 aa8.08□□□□□ -1.12
GGA3-201ENST00000537686 NDUFAF3Q9BU61 184 aa8.08□□□□□ -1.12
GGA3-201ENST00000537686 FGF23Q9GZV9 251 aaPredicted RBP8.08□□□□□ -1.12
GGA3-201ENST00000537686 PEF1Q9UBV8 284 aaKnown RBP8.08□□□□□ -1.12
GGA3-201ENST00000537686 LAMTOR2Q9Y2Q5 125 aa8.08□□□□□ -1.12
GGA3-201ENST00000537686 ACTL10Q5JWF8 245 aa8.08□□□□□ -1.12
GGA3-201ENST00000537686 C11orf53Q8IXP5 236 aa8.08□□□□□ -1.12
GGA3-201ENST00000537686 DAZ1Q9NQZ3 744 aaKnown RBP8.08□□□□□ -1.12
GGA3-201ENST00000537686 MRPL16Q9NX20 251 aaKnown RBP8.08□□□□□ -1.12
GGA3-201ENST00000537686 EYSQ5T1H1 3165 aa8.08□□□□□ -1.12
GGA3-201ENST00000537686 IGHV2-70DA0A0C4DH43 119 aa8.08□□□□□ -1.12
GGA3-201ENST00000537686 C22orf46C9J442 243 aa8.08□□□□□ -1.12
GGA3-201ENST00000537686 SH2D1AO60880 128 aa8.08□□□□□ -1.12
GGA3-201ENST00000537686 LRRK2Q5S007 2527 aa8.07□□□□□ -1.12
GGA3-201ENST00000537686 Q5PR19 223 aa8.07□□□□□ -1.12
GGA3-201ENST00000537686 LINC00477Q96M19 166 aa8.07□□□□□ -1.12
GGA3-201ENST00000537686 KAAG1Q9UBP8 84 aa8.07□□□□□ -1.12
GGA3-201ENST00000537686 H3BRM9 83 aa8.07□□□□□ -1.12
GGA3-201ENST00000537686 DPM2O94777 84 aa8.07□□□□□ -1.12
GGA3-201ENST00000537686 COPS9Q8WXC6 57 aa8.07□□□□□ -1.12
GGA3-201ENST00000537686 CYYR1Q96J86 154 aa8.07□□□□□ -1.12
GGA3-201ENST00000537686 WISP2O76076 250 aa8.07□□□□□ -1.12
GGA3-201ENST00000537686 FXYD7P58549 80 aa8.07□□□□□ -1.12
GGA3-201ENST00000537686 HAPLN4Q86UW8 402 aa8.07□□□□□ -1.12
GGA3-201ENST00000537686 CTSZQ9UBR2 303 aa8.07□□□□□ -1.12
GGA3-201ENST00000537686 ARHGAP21Q5T5U3 1957 aa8.07□□□□□ -1.12
GGA3-201ENST00000537686 FAM223BA6NKX1 122 aa8.06□□□□□ -1.12
GGA3-201ENST00000537686 DNAL4O96015 105 aa8.06□□□□□ -1.12
GGA3-201ENST00000537686 GATA3P23771 443 aa8.06□□□□□ -1.12
GGA3-201ENST00000537686 PCP4P48539 62 aa8.06□□□□□ -1.12
GGA3-201ENST00000537686 PDE6HQ13956 83 aa8.06□□□□□ -1.12
GGA3-201ENST00000537686 Q86TA4 180 aa8.06□□□□□ -1.12
GGA3-201ENST00000537686 FAM223AQ8IWN6 122 aa8.06□□□□□ -1.12
GGA3-201ENST00000537686 FAM110DQ8TAY7 271 aaPredicted RBP8.06□□□□□ -1.12
GGA3-201ENST00000537686 CHCHD1Q96BP2 118 aaKnown RBP8.06□□□□□ -1.12
GGA3-201ENST00000537686 SFTA2Q6UW10 78 aa8.06□□□□□ -1.12
GGA3-201ENST00000537686 C14orf178Q8N769 122 aaPredicted RBP8.06□□□□□ -1.12
GGA3-201ENST00000537686 TMEM190Q8WZ59 177 aa8.06□□□□□ -1.12
GGA3-201ENST00000537686 DPH3Q96FX2 82 aa8.06□□□□□ -1.12
GGA3-201ENST00000537686 YPEL3P61236 119 aaPredicted RBP8.06□□□□□ -1.12
GGA3-201ENST00000537686 IL15RAQ13261 267 aa8.06□□□□□ -1.12
GGA3-201ENST00000537686 ZNF876PQ49A33 203 aa8.06□□□□□ -1.12
GGA3-201ENST00000537686 IGF2-ASQ6U949 168 aa8.06□□□□□ -1.12
GGA3-201ENST00000537686 DMRTC2Q8IXT2 367 aaPredicted RBP8.06□□□□□ -1.12
GGA3-201ENST00000537686 AMN1Q8IY45 258 aa8.06□□□□□ -1.12
GGA3-201ENST00000537686 PKD1L2Q7Z442 2459 aa8.06□□□□□ -1.12
GGA3-201ENST00000537686 IGHV3-73A0A0B4J1V6 119 aa8.05□□□□□ -1.12
GGA3-201ENST00000537686 ERCC8Q13216 396 aa8.05□□□□□ -1.12
GGA3-201ENST00000537686 ZNF726P1Q15940 193 aa8.05□□□□□ -1.12
GGA3-201ENST00000537686 GTSCR1Q86UQ5 136 aa8.05□□□□□ -1.12
GGA3-201ENST00000537686 UBE2E2Q96LR5 201 aa8.05□□□□□ -1.12
GGA3-201ENST00000537686 CHCHD5Q9BSY4 110 aa8.05□□□□□ -1.12
GGA3-201ENST00000537686 SHISA9B4DS77 424 aa8.05□□□□□ -1.12
GGA3-201ENST00000537686 CR1LQ2VPA4 569 aa8.05□□□□□ -1.12
GGA3-201ENST00000537686 RCHY1Q96PM5 261 aa8.05□□□□□ -1.12
GGA3-201ENST00000537686 ALKBH7Q9BT30 221 aaPredicted RBP8.05□□□□□ -1.12
GGA3-201ENST00000537686 GGTLC3B5MD39 225 aa8.05□□□□□ -1.12
GGA3-201ENST00000537686 CD28P10747 220 aa8.05□□□□□ -1.12
GGA3-201ENST00000537686 DEFB131AP59861 70 aa8.05□□□□□ -1.12
GGA3-201ENST00000537686 CD300EQ496F6 205 aaPredicted RBP8.05□□□□□ -1.12
GGA3-201ENST00000537686 NHP2Q9NX24 153 aaKnown RBP8.05□□□□□ -1.12
GGA3-201ENST00000537686 A0A0U1RRA0 63 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms