RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 C11orf53Q8IXP5 236 aa6.73□□□□□ -1.33
SRGAP1-202ENST00000537556 LINC00526Q96FQ7 95 aa6.73□□□□□ -1.33
SRGAP1-202ENST00000537556 F8WDY8 70 aa6.73□□□□□ -1.33
SRGAP1-202ENST00000537556 NDUFA3O95167 84 aa6.73□□□□□ -1.33
SRGAP1-202ENST00000537556 ATP5G1P05496 136 aa6.73□□□□□ -1.33
SRGAP1-202ENST00000537556 GOLT1AQ6ZVE7 132 aa6.73□□□□□ -1.33
SRGAP1-202ENST00000537556 DEFB126Q9BYW3 111 aa6.73□□□□□ -1.33
SRGAP1-202ENST00000537556 EDA2RQ9HAV5 297 aa6.73□□□□□ -1.33
SRGAP1-202ENST00000537556 CHCHD2Q9Y6H1 151 aaPredicted RBP6.73□□□□□ -1.33
SRGAP1-202ENST00000537556 LRP4O75096 1905 aa6.72□□□□□ -1.33
SRGAP1-202ENST00000537556 SPTY2D1-AS1A0A0U1RR47 76 aa6.72□□□□□ -1.33
SRGAP1-202ENST00000537556 FAM240AA0A1B0GVK7 77 aa6.72□□□□□ -1.33
SRGAP1-202ENST00000537556 UTF1Q5T230 341 aa6.72□□□□□ -1.33
SRGAP1-202ENST00000537556 LINC01600Q96MT4 127 aa6.72□□□□□ -1.33
SRGAP1-202ENST00000537556 SMKR1H3BMG3 65 aa6.72□□□□□ -1.33
SRGAP1-202ENST00000537556 H7C1H1 209 aa6.72□□□□□ -1.33
SRGAP1-202ENST00000537556 LGALS9O00182 355 aa6.72□□□□□ -1.33
SRGAP1-202ENST00000537556 LIFP15018 202 aa6.72□□□□□ -1.33
SRGAP1-202ENST00000537556 CCL11P51671 97 aa6.72□□□□□ -1.33
SRGAP1-202ENST00000537556 ZNF56Q15929 161 aa6.72□□□□□ -1.33
SRGAP1-202ENST00000537556 PRO1854Q9UHT4 67 aa6.72□□□□□ -1.33
SRGAP1-202ENST00000537556 F8VRH5 84 aa6.72□□□□□ -1.33
SRGAP1-202ENST00000537556 H3BMM0 161 aa6.72□□□□□ -1.33
SRGAP1-202ENST00000537556 UPK2O00526 184 aa6.72□□□□□ -1.33
SRGAP1-202ENST00000537556 IGLV2-11P01706 119 aa6.72□□□□□ -1.33
SRGAP1-202ENST00000537556 HOXB4P17483 251 aaPredicted RBP6.72□□□□□ -1.33
SRGAP1-202ENST00000537556 TNFRSF4P43489 277 aa6.72□□□□□ -1.33
SRGAP1-202ENST00000537556 TMEM75Q8N9X5 138 aa6.72□□□□□ -1.33
SRGAP1-202ENST00000537556 PRR7Q8TB68 274 aa6.72□□□□□ -1.33
SRGAP1-202ENST00000537556 UBE2WQ96B02 151 aa6.72□□□□□ -1.33
SRGAP1-202ENST00000537556 PTPRBP23467 1997 aa6.71□□□□□ -1.33
SRGAP1-202ENST00000537556 A0A096LPE4 126 aa6.71□□□□□ -1.34
SRGAP1-202ENST00000537556 FAM236AA0A1B0GUQ0 79 aa6.71□□□□□ -1.34
SRGAP1-202ENST00000537556 FAM236BA0A1B0GV22 79 aa6.71□□□□□ -1.34
SRGAP1-202ENST00000537556 A0A1W2PPZ6 126 aa6.71□□□□□ -1.34
SRGAP1-202ENST00000537556 ZNF815PA8K554 130 aa6.71□□□□□ -1.34
SRGAP1-202ENST00000537556 WDR86Q86TI4 376 aa6.71□□□□□ -1.34
SRGAP1-202ENST00000537556 THAP8Q8NA92 274 aa6.71□□□□□ -1.34
SRGAP1-202ENST00000537556 PROK2Q9HC23 129 aa6.71□□□□□ -1.34
SRGAP1-202ENST00000537556 BRCA2P51587 3418 aa6.71□□□□□ -1.34
SRGAP1-202ENST00000537556 TRAV12-1A0A0B4J245 112 aa6.71□□□□□ -1.34
SRGAP1-202ENST00000537556 ZNHIT1O43257 154 aa6.71□□□□□ -1.34
SRGAP1-202ENST00000537556 MRPL33O75394 65 aaKnown RBP6.71□□□□□ -1.34
SRGAP1-202ENST00000537556 GP9P14770 177 aa6.71□□□□□ -1.34
SRGAP1-202ENST00000537556 DEFB103AP81534 67 aa6.71□□□□□ -1.34
SRGAP1-202ENST00000537556 GAGE2AQ6NT46 116 aa6.71□□□□□ -1.34
SRGAP1-202ENST00000537556 KIR2DL5BQ8NHK3 375 aa6.71□□□□□ -1.34
SRGAP1-202ENST00000537556 SSUH2Q9Y2M2 353 aa6.71□□□□□ -1.34
SRGAP1-202ENST00000537556 KNTC1P50748 2209 aa6.71□□□□□ -1.34
SRGAP1-202ENST00000537556 TRGV11A0A075B6L2 103 aa6.7□□□□□ -1.34
SRGAP1-202ENST00000537556 CXCL13O43927 109 aa6.7□□□□□ -1.34
SRGAP1-202ENST00000537556 IGHV3-9P01782 118 aa6.7□□□□□ -1.34
SRGAP1-202ENST00000537556 GRPP07492 148 aa6.7□□□□□ -1.34
SRGAP1-202ENST00000537556 CD3EP07766 207 aa6.7□□□□□ -1.34
SRGAP1-202ENST00000537556 SSR4P51571 173 aa6.7□□□□□ -1.34
SRGAP1-202ENST00000537556 PMVKQ15126 192 aa6.7□□□□□ -1.34
SRGAP1-202ENST00000537556 ATXN8Q156A1 80 aa6.7□□□□□ -1.34
SRGAP1-202ENST00000537556 TEX36Q5VZQ5 186 aa6.7□□□□□ -1.34
SRGAP1-202ENST00000537556 ZCCHC24Q8N2G6 241 aaKnown RBP6.7□□□□□ -1.34
SRGAP1-202ENST00000537556 Q8N8P6 123 aa6.7□□□□□ -1.34
SRGAP1-202ENST00000537556 PIMREGQ9BSJ6 248 aa6.7□□□□□ -1.34
SRGAP1-202ENST00000537556 TEX49A0A1B0GTD5 131 aa6.7□□□□□ -1.34
SRGAP1-202ENST00000537556 DKK1O94907 266 aa6.7□□□□□ -1.34
SRGAP1-202ENST00000537556 TNFRSF6BO95407 300 aa6.7□□□□□ -1.34
SRGAP1-202ENST00000537556 FAM90A1Q86YD7 464 aa6.7□□□□□ -1.34
SRGAP1-202ENST00000537556 UNC80Q8N2C7 3258 aa6.7□□□□□ -1.34
SRGAP1-202ENST00000537556 SZT2Q5T011 3432 aa6.7□□□□□ -1.34
SRGAP1-202ENST00000537556 DUX3Q96PT4 197 aa6.69□□□□□ -1.34
SRGAP1-202ENST00000537556 IGLV3-12A0A075B6K2 115 aa6.69□□□□□ -1.34
SRGAP1-202ENST00000537556 CFC1BP0CG36 223 aa6.69□□□□□ -1.34
SRGAP1-202ENST00000537556 CFC1P0CG37 223 aa6.69□□□□□ -1.34
SRGAP1-202ENST00000537556 P0DMU3 169 aa6.69□□□□□ -1.34
SRGAP1-202ENST00000537556 FAM231AP0DMU4 169 aa6.69□□□□□ -1.34
SRGAP1-202ENST00000537556 FAM231CP0DMU5 169 aa6.69□□□□□ -1.34
SRGAP1-202ENST00000537556 PLXDC1Q8IUK5 500 aa6.69□□□□□ -1.34
SRGAP1-202ENST00000537556 IGKV1D-37A0A075B6S9 117 aa6.69□□□□□ -1.34
SRGAP1-202ENST00000537556 TRBV10-2A0A0K0K1G8 114 aa6.69□□□□□ -1.34
SRGAP1-202ENST00000537556 RBAKDNA6NC62 111 aa6.69□□□□□ -1.34
SRGAP1-202ENST00000537556 H3BTX0 84 aa6.69□□□□□ -1.34
SRGAP1-202ENST00000537556 ZNF134P52741 427 aa6.69□□□□□ -1.34
SRGAP1-202ENST00000537556 EBI3Q14213 229 aa6.69□□□□□ -1.34
SRGAP1-202ENST00000537556 LAGE3Q14657 143 aa6.69□□□□□ -1.34
SRGAP1-202ENST00000537556 LINC01620Q4KN68 170 aa6.69□□□□□ -1.34
SRGAP1-202ENST00000537556 TRPT1Q86TN4 253 aaKnown RBP6.69□□□□□ -1.34
SRGAP1-202ENST00000537556 IGFBPL1Q8WX77 278 aa6.69□□□□□ -1.34
SRGAP1-202ENST00000537556 INS-IGF2F8WCM5 200 aa6.68□□□□□ -1.34
SRGAP1-202ENST00000537556 K7ESF4 209 aa6.68□□□□□ -1.34
SRGAP1-202ENST00000537556 CRIP1P50238 77 aa6.68□□□□□ -1.34
SRGAP1-202ENST00000537556 CRIP2P52943 208 aaPredicted RBP6.68□□□□□ -1.34
SRGAP1-202ENST00000537556 POM121L12Q8N7R1 296 aa6.68□□□□□ -1.34
SRGAP1-202ENST00000537556 ORM1P02763 201 aa6.68□□□□□ -1.34
SRGAP1-202ENST00000537556 EDDM3AQ14507 147 aa6.68□□□□□ -1.34
SRGAP1-202ENST00000537556 MDP1Q86V88 176 aa6.68□□□□□ -1.34
SRGAP1-202ENST00000537556 TDHQ8IZJ6 230 aa6.68□□□□□ -1.34
SRGAP1-202ENST00000537556 ZNF71Q9NQZ8 489 aaPredicted RBP6.68□□□□□ -1.34
SRGAP1-202ENST00000537556 ZNF256Q9Y2P7 627 aaPredicted RBP6.68□□□□□ -1.34
SRGAP1-202ENST00000537556 MKI67P46013 3256 aaKnown RBP6.68□□□□□ -1.34
SRGAP1-202ENST00000537556 K7EM74 188 aa6.67□□□□□ -1.34
SRGAP1-202ENST00000537556 MRPS12O15235 138 aaKnown RBP6.67□□□□□ -1.34
SRGAP1-202ENST00000537556 CRYGBP07316 175 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms